prot_M-pyrifera_M_contig11244.2602.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig11244.2602.1
Unique Nameprot_M-pyrifera_M_contig11244.2602.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length101
Homology
BLAST of mRNA_M-pyrifera_M_contig11244.2602.1 vs. uniprot
Match: D8LTD4_ECTSI (Glutamyl-tRNA amidotransferase, subunit A, c-terminal region n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTD4_ECTSI)

HSP 1 Score: 159 bits (402), Expect = 5.600e-47
Identity = 79/99 (79.80%), Postives = 86/99 (86.87%), Query Frame = 0
Query:    1 PTAPTTAYRLGDFAEKGVDAYADDVFTAPASLTGLPALSVPCGQDSAGLPIGVQLIGKTLSEGLLLRAGQAYETATEWHRRFAPGVSASSAAEQVAAGA 99
            PTAPTTAYRLG++AEKGV  YADDVFT PASL GLP LSVPCGQD AGLPIGVQL+G++LSE LLLR GQAYE+AT WHR+FAPGVSASS A  V AGA
Sbjct:  144 PTAPTTAYRLGEYAEKGVGVYADDVFTTPASLAGLPGLSVPCGQDRAGLPIGVQLMGQSLSEDLLLRVGQAYESATPWHRQFAPGVSASSPAAAVPAGA 242          
BLAST of mRNA_M-pyrifera_M_contig11244.2602.1 vs. uniprot
Match: A0A6H5KXC5_9PHAE (Glutamyl-tRNA(Gln) amidotransferase subunit A, mitochondrial n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXC5_9PHAE)

HSP 1 Score: 160 bits (404), Expect = 2.090e-44
Identity = 80/99 (80.81%), Postives = 85/99 (85.86%), Query Frame = 0
Query:    1 PTAPTTAYRLGDFAEKGVDAYADDVFTAPASLTGLPALSVPCGQDSAGLPIGVQLIGKTLSEGLLLRAGQAYETATEWHRRFAPGVSASSAAEQVAAGA 99
            PTAPTTAYRLG++AEKGV  YADDVFT PASL GLP LSVPCGQD AGLPIGVQL+GK LSE LLLR GQAYE+AT WHR+FAPGVSASS A  V AGA
Sbjct:  463 PTAPTTAYRLGEYAEKGVGVYADDVFTTPASLAGLPGLSVPCGQDRAGLPIGVQLMGKPLSEDLLLRVGQAYESATPWHRQFAPGVSASSPAAAVPAGA 561          
BLAST of mRNA_M-pyrifera_M_contig11244.2602.1 vs. uniprot
Match: A0A836CQP8_9STRA (Glutamyl-tRNA(Gln) amidotransferase subunit A, mitochondrial n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CQP8_9STRA)

HSP 1 Score: 123 bits (309), Expect = 4.860e-31
Identity = 59/86 (68.60%), Postives = 67/86 (77.91%), Query Frame = 0
Query:    1 PTAPTTAYRLGDFAEKGVDAYADDVFTAPASLTGLPALSVPCGQDSAGLPIGVQLIGKTLSEGLLLRAGQAYETATEWHRRFAPGV 86
            PTAPTTAYRLGDF  KGV +YADD+FT PASL GLPALS+PCG D+AGLPIGVQLIG    E  L+RA  AYE +T+W  R  PG+
Sbjct:  427 PTAPTTAYRLGDFEAKGVASYADDLFTVPASLAGLPALSLPCGVDAAGLPIGVQLIGGAWQEEALVRAAYAYERSTDWRARLPPGL 512          
BLAST of mRNA_M-pyrifera_M_contig11244.2602.1 vs. uniprot
Match: A0A534U3P2_9DELT (Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA (Fragment) n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A534U3P2_9DELT)

HSP 1 Score: 99.4 bits (246), Expect = 8.020e-25
Identity = 46/84 (54.76%), Postives = 58/84 (69.05%), Query Frame = 0
Query:    1 PTAPTTAYRLGDFAEKGVDAYADDVFTAPASLTGLPALSVPCGQDSAGLPIGVQLIGKTLSEGLLLRAGQAYETATEWHRRFAP 84
            P APTTA+RLG+     +  Y  D+FT   +L GLPAL++PCG D+AGLPIG+Q+IG+   E  +LR G AYE AT WH R AP
Sbjct:   39 PVAPTTAFRLGEKTADPLTMYLSDIFTISVNLAGLPALALPCGFDAAGLPIGLQVIGRPFEEAAVLRIGHAYEQATTWHTRGAP 122          
BLAST of mRNA_M-pyrifera_M_contig11244.2602.1 vs. uniprot
Match: A0A0G4GTE2_VITBC (Glutamyl-tRNA(Gln) amidotransferase subunit A, mitochondrial n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4GTE2_VITBC)

HSP 1 Score: 103 bits (257), Expect = 1.110e-23
Identity = 52/98 (53.06%), Postives = 62/98 (63.27%), Query Frame = 0
Query:    1 PTAPTTAYRLGDFAEKGVDAYADDVFTAPASLTGLPALSVPCGQDSAGLPIGVQLIGKTLSEGLLLRAGQAYETATEWHRRFAPGVSASSAAEQVAAG 98
            PTAPTTAYRLG F E  V+ Y DD+ T PASL+GLPALSVPCG  +  LPIG+Q++GK L E  LL+ G  Y+ AT W  R    + A     Q   G
Sbjct:  464 PTAPTTAYRLGQFKENKVETYIDDLLTVPASLSGLPALSVPCGISAEDLPIGLQIVGKPLDELRLLQIGAGYDEATGWTSRLQKKLQAIKGERQAGGG 561          
BLAST of mRNA_M-pyrifera_M_contig11244.2602.1 vs. uniprot
Match: A0A521S580_9BACT (Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA (Fragment) n=1 Tax=bacterium TaxID=1869227 RepID=A0A521S580_9BACT)

HSP 1 Score: 98.2 bits (243), Expect = 1.680e-23
Identity = 44/81 (54.32%), Postives = 57/81 (70.37%), Query Frame = 0
Query:    1 PTAPTTAYRLGDFAEKGVDAYADDVFTAPASLTGLPALSVPCGQDSAGLPIGVQLIGKTLSEGLLLRAGQAYETATEWHRR 81
            PTAPTTA+++G+  +  +  Y  D+FT   +L GLP LS+PCG DS GLPIG+Q+IGK   E  +LR   AYE ATEWH+R
Sbjct:  113 PTAPTTAFKIGEKTQDPLQMYLSDIFTISVNLAGLPGLSLPCGFDSEGLPIGMQIIGKHFDEATILRIAFAYEQATEWHKR 193          
BLAST of mRNA_M-pyrifera_M_contig11244.2602.1 vs. uniprot
Match: A0A1F4B1D9_9PROT (Glutamyl-tRNA(Gln) amidotransferase subunit A n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_02_FULL_66_14 TaxID=1797490 RepID=A0A1F4B1D9_9PROT)

HSP 1 Score: 102 bits (253), Expect = 2.940e-23
Identity = 48/84 (57.14%), Postives = 58/84 (69.05%), Query Frame = 0
Query:    1 PTAPTTAYRLGDFAEKGVDAYADDVFTAPASLTGLPALSVPCGQDSAGLPIGVQLIGKTLSEGLLLRAGQAYETATEWHRRFAP 84
            P APTTA+ LG+  +  V  Y +D+FT PASL GLPALS+PCG D AGLP+GVQLIG   +E  LL A   Y+  T+WHRR  P
Sbjct:  399 PIAPTTAFALGENVDDPVRMYLNDIFTIPASLAGLPALSIPCGFDGAGLPVGVQLIGPHFTESRLLGAAHRYQQETDWHRRVPP 482          
BLAST of mRNA_M-pyrifera_M_contig11244.2602.1 vs. uniprot
Match: A0A7X9J2Q1_9BACT (Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA n=1 Tax=Armatimonadetes bacterium TaxID=2033014 RepID=A0A7X9J2Q1_9BACT)

HSP 1 Score: 95.9 bits (237), Expect = 3.460e-23
Identity = 45/84 (53.57%), Postives = 59/84 (70.24%), Query Frame = 0
Query:    1 PTAPTTAYRLGDFAEKGVDAYADDVFTAPASLTGLPALSVPCGQDSAGLPIGVQLIGKTLSEGLLLRAGQAYETATEWHRRFAP 84
            PTAP TA+R+G+  +     Y +DV T P +L GLP LSVPCG  + G+P+G+QLIG+   E +LL+AG A+E ATEW RR AP
Sbjct:   57 PTAPATAFRIGEKVDDQFQMYLEDVCTIPVNLAGLPGLSVPCG-SAEGMPVGMQLIGRHFEEDVLLKAGHAFEQATEWGRRLAP 139          
BLAST of mRNA_M-pyrifera_M_contig11244.2602.1 vs. uniprot
Match: A0A534U1E1_9DELT (Glutamyl-tRNA(Gln) amidotransferase subunit A n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A534U1E1_9DELT)

HSP 1 Score: 101 bits (251), Expect = 5.110e-23
Identity = 47/90 (52.22%), Postives = 60/90 (66.67%), Query Frame = 0
Query:    1 PTAPTTAYRLGDFAEKGVDAYADDVFTAPASLTGLPALSVPCGQDSAGLPIGVQLIGKTLSEGLLLRAGQAYETATEWHRRFAPGVSASS 90
            PTAPTTA+RLG+     +  Y  D+FT   +L GLP + VPCG D AGLPIG+Q++G    E ++LR  +AYE ATEWH R  P V A+S
Sbjct:  380 PTAPTTAFRLGEKLADPLQMYLSDIFTISVNLAGLPGIVVPCGVDDAGLPIGLQIVGPPFGEEVVLRTARAYEAATEWHTRRPPRVGAAS 469          
BLAST of mRNA_M-pyrifera_M_contig11244.2602.1 vs. uniprot
Match: A0A3A0FV31_9PROT (Glutamyl-tRNA(Gln) amidotransferase subunit A (Fragment) n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A3A0FV31_9PROT)

HSP 1 Score: 99.4 bits (246), Expect = 7.160e-23
Identity = 44/83 (53.01%), Postives = 60/83 (72.29%), Query Frame = 0
Query:    1 PTAPTTAYRLGDFAEKGVDAYADDVFTAPASLTGLPALSVPCGQDSAGLPIGVQLIGKTLSEGLLLRAGQAYETATEWHRRFA 83
            P APTTA+++G+ +   +  Y  D+FT P +L GLP +S+PCG DSAGLPIG+QLI K  +E  + RA  AY+ ATEWH++FA
Sbjct:  248 PVAPTTAFKIGEKSSDPLAMYLSDIFTIPVNLAGLPGMSLPCGFDSAGLPIGLQLIAKPWNEEAIFRAAAAYQGATEWHKKFA 330          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig11244.2602.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LTD4_ECTSI5.600e-4779.80Glutamyl-tRNA amidotransferase, subunit A, c-termi... [more]
A0A6H5KXC5_9PHAE2.090e-4480.81Glutamyl-tRNA(Gln) amidotransferase subunit A, mit... [more]
A0A836CQP8_9STRA4.860e-3168.60Glutamyl-tRNA(Gln) amidotransferase subunit A, mit... [more]
A0A534U3P2_9DELT8.020e-2554.76Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subun... [more]
A0A0G4GTE2_VITBC1.110e-2353.06Glutamyl-tRNA(Gln) amidotransferase subunit A, mit... [more]
A0A521S580_9BACT1.680e-2354.32Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subun... [more]
A0A1F4B1D9_9PROT2.940e-2357.14Glutamyl-tRNA(Gln) amidotransferase subunit A n=1 ... [more]
A0A7X9J2Q1_9BACT3.460e-2353.57Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subun... [more]
A0A534U1E1_9DELT5.110e-2352.22Glutamyl-tRNA(Gln) amidotransferase subunit A n=1 ... [more]
A0A3A0FV31_9PROT7.160e-2353.01Glutamyl-tRNA(Gln) amidotransferase subunit A (Fra... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR023631Amidase signature domainPFAMPF01425Amidasecoord: 1..66
e-value: 2.3E-14
score: 53.2
IPR036928Amidase signature (AS) superfamilyGENE3D3.90.1300.10coord: 1..85
e-value: 2.4E-25
score: 91.6
IPR036928Amidase signature (AS) superfamilySUPERFAMILY75304Amidase signature (AS) enzymescoord: 1..83
IPR000120AmidasePANTHERPTHR11895AMIDASEcoord: 1..81
NoneNo IPR availablePANTHERPTHR11895:SF7GLUTAMYL-TRNA(GLN) AMIDOTRANSFERASE SUBUNIT A, MITOCHONDRIALcoord: 1..81

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig11244contigM-pyrifera_M_contig11244:1054..8868 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig11244.2602.1mRNA_M-pyrifera_M_contig11244.2602.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig11244 1054..9207 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig11244.2602.1 ID=prot_M-pyrifera_M_contig11244.2602.1|Name=mRNA_M-pyrifera_M_contig11244.2602.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=101bp
PTAPTTAYRLGDFAEKGVDAYADDVFTAPASLTGLPALSVPCGQDSAGLP
IGVQLIGKTLSEGLLLRAGQAYETATEWHRRFAPGVSASSAAEQVAAGAN
*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR023631Amidase_dom
IPR036928AS_sf
IPR000120Amidase