prot_M-pyrifera_M_contig112233.2564.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig112233.2564.1
Unique Nameprot_M-pyrifera_M_contig112233.2564.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length93
Homology
BLAST of mRNA_M-pyrifera_M_contig112233.2564.1 vs. uniprot
Match: L8GWV7_ACACA (Nuclear helicase, putative n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GWV7_ACACA)

HSP 1 Score: 113 bits (283), Expect = 2.850e-27
Identity = 53/93 (56.99%), Postives = 69/93 (74.19%), Query Frame = 0
Query:    1 QLEDDQLYSNYILSIPLHCAHPAHIVESTTLASARPPPLTYEADLPSCCLDRGDKSTLSSLQLETVRYVGQRHEQTLADNSRAGYFCGDGTGM 93
            Q E+  +Y+ Y   IP+ C HPA+IVE+ TLASA+PP  TY+  LP  C ++G+KS LS+LQ ETV  VGQRHE+ L + +RAGYFCGDGTG+
Sbjct:  420 QSEEAMVYAGYKPQIPIFCTHPANIVEAATLASAQPPEPTYKPKLPPACTEKGEKSLLSTLQYETVVMVGQRHEKMLLNQTRAGYFCGDGTGV 512          
BLAST of mRNA_M-pyrifera_M_contig112233.2564.1 vs. uniprot
Match: A0A6A0GSS1_HYAAZ (Uncharacterized protein n=2 Tax=Hyalella azteca TaxID=294128 RepID=A0A6A0GSS1_HYAAZ)

HSP 1 Score: 76.3 bits (186), Expect = 3.640e-14
Identity = 41/89 (46.07%), Postives = 56/89 (62.92%), Query Frame = 0
Query:    6 QLYSNYILS-IPLHCAHPAHIVESTTLASARPPPLTYEADLPSCCLDRGDKSTLSSLQLETVRYVGQRHEQTLADNSRAGYFCGDGTGM 93
            + Y+ Y LS + +  AHP  +VES ++AS  PP +TY   +P   + +G    LS LQLET+ YVGQ+HE  L D SRAG+  GDG G+
Sbjct:  345 ETYAKYSLSKLKIGRAHPDPVVESASMASVEPPDITYRIKMPEETVMKGK---LSCLQLETITYVGQKHECFLPDGSRAGFLIGDGAGV 430          
BLAST of mRNA_M-pyrifera_M_contig112233.2564.1 vs. uniprot
Match: A0A0F9TJF6_9ZZZZ (Uncharacterized protein (Fragment) n=1 Tax=marine sediment metagenome TaxID=412755 RepID=A0A0F9TJF6_9ZZZZ)

HSP 1 Score: 75.5 bits (184), Expect = 6.890e-14
Identity = 40/92 (43.48%), Postives = 54/92 (58.70%), Query Frame = 0
Query:    5 DQLYSNYI---LSIPLHCAHPAHIVESTTLASARPPPLTYEADLPSCCLDRGDKSTLSSLQLETVRYVGQRHEQTLADNSRAGYFCGDGTGM 93
            + LY  Y    + IP    HP  +V+S  +A+  PPP TY  ++PS  +  G    +S +QLE+V Y GQ HE+ L D SR GYF GDGTG+
Sbjct:  833 EDLYEGYRPERVEIPGSQRHPTPLVQSAAMAAVSPPPATYSPNIPSKVIKEG---RISDIQLESVVYSGQSHEEFLEDGSRRGYFIGDGTGV 921          
BLAST of mRNA_M-pyrifera_M_contig112233.2564.1 vs. uniprot
Match: UPI001E67901D (protein strawberry notch homolog 1-like isoform X1 n=1 Tax=Procambarus clarkii TaxID=6728 RepID=UPI001E67901D)

HSP 1 Score: 74.3 bits (181), Expect = 1.730e-13
Identity = 38/97 (39.18%), Postives = 59/97 (60.82%), Query Frame = 0
Query:    3 EDDQL-----YSNYI-LSIPLHCAHPAHIVESTTLASARPPPLTYEADLPSCCLDRGDKSTLSSLQLETVRYVGQRHEQTLADNSRAGYFCGDGTGM 93
            EDD +     YS+Y+   + +   HP  +VE+ +++S  PP + Y+ D+P   +D G    LS+LQLE++ Y  Q+HEQ L D +RAG+  GDG G+
Sbjct:  427 EDDDMGIAETYSDYMPTKLKVGIKHPDQVVETASMSSVEPPDVWYDMDIPDSSIDTGK---LSALQLESITYASQQHEQFLPDGTRAGFLIGDGAGV 520          
BLAST of mRNA_M-pyrifera_M_contig112233.2564.1 vs. uniprot
Match: A0A8J5ND44_HOMAM (Strawberry notch 1-like n=16 Tax=Astacidea TaxID=6712 RepID=A0A8J5ND44_HOMAM)

HSP 1 Score: 73.9 bits (180), Expect = 2.380e-13
Identity = 36/89 (40.45%), Postives = 57/89 (64.04%), Query Frame = 0
Query:    6 QLYSNYILS-IPLHCAHPAHIVESTTLASARPPPLTYEADLPSCCLDRGDKSTLSSLQLETVRYVGQRHEQTLADNSRAGYFCGDGTGM 93
            + YS+Y+ S + +   HP  +VE+ +++S  PP + YE ++P   +D G    LS+LQLE++ Y  Q+HEQ L D +RAG+  GDG G+
Sbjct:  625 ETYSDYMPSKLKVGIKHPDQVVETASMSSVEPPDVWYEMEIPDTSIDTGK---LSALQLESITYTSQQHEQFLPDGTRAGFLIGDGAGV 710          
BLAST of mRNA_M-pyrifera_M_contig112233.2564.1 vs. uniprot
Match: A0A0P5TE37_9CRUS (Putative Strawberry notch n=3 Tax=Daphnia magna TaxID=35525 RepID=A0A0P5TE37_9CRUS)

HSP 1 Score: 72.8 bits (177), Expect = 5.940e-13
Identity = 38/89 (42.70%), Postives = 57/89 (64.04%), Query Frame = 0
Query:    6 QLYSNYI-LSIPLHCAHPAHIVESTTLASARPPPLTYEADLPSCCLDRGDKSTLSSLQLETVRYVGQRHEQTLADNSRAGYFCGDGTGM 93
            + Y++Y+   + +   HP  +VE+ +LAS  PP + Y+  +P   +D G   +LS+LQLE++ Y  Q+HEQTL D SRAGY  GDG G+
Sbjct:  252 ETYADYMPTKVKIGRKHPDPVVETASLASVAPPDVWYKLAIPEESIDSG---SLSALQLESITYSCQQHEQTLPDGSRAGYLIGDGAGV 337          
BLAST of mRNA_M-pyrifera_M_contig112233.2564.1 vs. uniprot
Match: A0A0P5BEC0_9CRUS (Protein strawberry notch n=6 Tax=Daphnia magna TaxID=35525 RepID=A0A0P5BEC0_9CRUS)

HSP 1 Score: 72.8 bits (177), Expect = 6.010e-13
Identity = 38/89 (42.70%), Postives = 57/89 (64.04%), Query Frame = 0
Query:    6 QLYSNYI-LSIPLHCAHPAHIVESTTLASARPPPLTYEADLPSCCLDRGDKSTLSSLQLETVRYVGQRHEQTLADNSRAGYFCGDGTGM 93
            + Y++Y+   + +   HP  +VE+ +LAS  PP + Y+  +P   +D G   +LS+LQLE++ Y  Q+HEQTL D SRAGY  GDG G+
Sbjct:  252 ETYADYMPTKVKIGRKHPDPVVETASLASVAPPDVWYKLAIPEESIDSG---SLSALQLESITYSCQQHEQTLPDGSRAGYLIGDGAGV 337          
BLAST of mRNA_M-pyrifera_M_contig112233.2564.1 vs. uniprot
Match: A0A2P2IC24_9CRUS (Protein strawberry notch homolog 1-like (Fragment) n=1 Tax=Hirondellea gigas TaxID=1518452 RepID=A0A2P2IC24_9CRUS)

HSP 1 Score: 72.4 bits (176), Expect = 7.810e-13
Identity = 39/89 (43.82%), Postives = 56/89 (62.92%), Query Frame = 0
Query:    6 QLYSNYILS-IPLHCAHPAHIVESTTLASARPPPLTYEADLPSCCLDRGDKSTLSSLQLETVRYVGQRHEQTLADNSRAGYFCGDGTGM 93
            + ++NY  S + +   HP  +VES ++AS  PP + Y   LP+  +D G    LS+LQLET+ YVGQ+HE  L D +RAG+  GDG G+
Sbjct:  134 ETFANYKPSKLKIGREHPDLVVESASMASVEPPDVYYRPKLPAQLIDDG---RLSALQLETITYVGQKHECILPDGNRAGFLVGDGAGV 219          
BLAST of mRNA_M-pyrifera_M_contig112233.2564.1 vs. uniprot
Match: A0A6A7FWW7_9CRUS (Protein strawberry notch homolog 1-like (Fragment) n=3 Tax=Hirondellea gigas TaxID=1518452 RepID=A0A6A7FWW7_9CRUS)

HSP 1 Score: 72.4 bits (176), Expect = 8.200e-13
Identity = 39/89 (43.82%), Postives = 56/89 (62.92%), Query Frame = 0
Query:    6 QLYSNYILS-IPLHCAHPAHIVESTTLASARPPPLTYEADLPSCCLDRGDKSTLSSLQLETVRYVGQRHEQTLADNSRAGYFCGDGTGM 93
            + ++NY  S + +   HP  +VES ++AS  PP + Y   LP+  +D G    LS+LQLET+ YVGQ+HE  L D +RAG+  GDG G+
Sbjct:  203 ETFANYKPSKLKIGREHPDLVVESASMASVEPPDVYYRPKLPAQLIDDG---RLSALQLETITYVGQKHECILPDGNRAGFLVGDGAGV 288          
BLAST of mRNA_M-pyrifera_M_contig112233.2564.1 vs. uniprot
Match: A0A6G3MDQ0_HENSL (Protein strawberry notch homolog 1 (Trinotate prediction) (Fragment) n=1 Tax=Henneguya salminicola TaxID=69463 RepID=A0A6G3MDQ0_HENSL)

HSP 1 Score: 70.5 bits (171), Expect = 3.820e-12
Identity = 37/87 (42.53%), Postives = 54/87 (62.07%), Query Frame = 0
Query:    8 YSNYI-LSIPLHCAHPAHIVESTTLASARPPPLTYEADLPSCCLDRGDKSTLSSLQLETVRYVGQRHEQTLADNSRAGYFCGDGTGM 93
            Y +Y+   + +   HP  +VES++L+   PP + Y+  LP+  +++G    LSSLQLE+V Y  Q+HE  L D SRAGY  GDG G+
Sbjct:  127 YDDYVPTKLTIGLKHPDCVVESSSLSVVSPPDVKYQLSLPNSVIEKG---MLSSLQLESVVYACQKHEDFLPDGSRAGYLIGDGPGV 210          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig112233.2564.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
L8GWV7_ACACA2.850e-2756.99Nuclear helicase, putative n=1 Tax=Acanthamoeba ca... [more]
A0A6A0GSS1_HYAAZ3.640e-1446.07Uncharacterized protein n=2 Tax=Hyalella azteca Ta... [more]
A0A0F9TJF6_9ZZZZ6.890e-1443.48Uncharacterized protein (Fragment) n=1 Tax=marine ... [more]
UPI001E67901D1.730e-1339.18protein strawberry notch homolog 1-like isoform X1... [more]
A0A8J5ND44_HOMAM2.380e-1340.45Strawberry notch 1-like n=16 Tax=Astacidea TaxID=6... [more]
A0A0P5TE37_9CRUS5.940e-1342.70Putative Strawberry notch n=3 Tax=Daphnia magna Ta... [more]
A0A0P5BEC0_9CRUS6.010e-1342.70Protein strawberry notch n=6 Tax=Daphnia magna Tax... [more]
A0A2P2IC24_9CRUS7.810e-1343.82Protein strawberry notch homolog 1-like (Fragment)... [more]
A0A6A7FWW7_9CRUS8.200e-1343.82Protein strawberry notch homolog 1-like (Fragment)... [more]
A0A6G3MDQ0_HENSL3.820e-1242.53Protein strawberry notch homolog 1 (Trinotate pred... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR039187Strawberry notch, AAA domainPFAMPF13872AAA_34coord: 21..93
e-value: 3.0E-20
score: 72.3
NoneNo IPR availablePANTHERPTHR12706:SF13PROTEIN STRAWBERRY NOTCHcoord: 4..93
IPR026741Protein strawberry notchPANTHERPTHR12706STRAWBERRY NOTCH-RELATEDcoord: 4..93

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig112233contigM-pyrifera_M_contig112233:214..492 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig112233.2564.1mRNA_M-pyrifera_M_contig112233.2564.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig112233 214..492 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig112233.2564.1 ID=prot_M-pyrifera_M_contig112233.2564.1|Name=mRNA_M-pyrifera_M_contig112233.2564.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=93bp
QLEDDQLYSNYILSIPLHCAHPAHIVESTTLASARPPPLTYEADLPSCCL
DRGDKSTLSSLQLETVRYVGQRHEQTLADNSRAGYFCGDGTGM
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039187SNO_AAA
IPR026741SNO