mRNA_M-pyrifera_M_contig112233.2564.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig112233.2564.1 vs. uniprot
Match: L8GWV7_ACACA (Nuclear helicase, putative n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GWV7_ACACA) HSP 1 Score: 113 bits (283), Expect = 2.850e-27 Identity = 53/93 (56.99%), Postives = 69/93 (74.19%), Query Frame = 1
Query: 1 QLEDDQLYSNYILSIPLHCAHPAHIVESTTLASARPPPLTYEADLPSCCLDRGDKSTLSSLQLETVRYVGQRHEQTLADNSRAGYFCGDGTGM 279
Q E+ +Y+ Y IP+ C HPA+IVE+ TLASA+PP TY+ LP C ++G+KS LS+LQ ETV VGQRHE+ L + +RAGYFCGDGTG+
Sbjct: 420 QSEEAMVYAGYKPQIPIFCTHPANIVEAATLASAQPPEPTYKPKLPPACTEKGEKSLLSTLQYETVVMVGQRHEKMLLNQTRAGYFCGDGTGV 512
BLAST of mRNA_M-pyrifera_M_contig112233.2564.1 vs. uniprot
Match: A0A6A0GSS1_HYAAZ (Uncharacterized protein n=2 Tax=Hyalella azteca TaxID=294128 RepID=A0A6A0GSS1_HYAAZ) HSP 1 Score: 76.3 bits (186), Expect = 3.640e-14 Identity = 41/89 (46.07%), Postives = 56/89 (62.92%), Query Frame = 1
Query: 16 QLYSNYILS-IPLHCAHPAHIVESTTLASARPPPLTYEADLPSCCLDRGDKSTLSSLQLETVRYVGQRHEQTLADNSRAGYFCGDGTGM 279
+ Y+ Y LS + + AHP +VES ++AS PP +TY +P + +G LS LQLET+ YVGQ+HE L D SRAG+ GDG G+
Sbjct: 345 ETYAKYSLSKLKIGRAHPDPVVESASMASVEPPDITYRIKMPEETVMKGK---LSCLQLETITYVGQKHECFLPDGSRAGFLIGDGAGV 430
BLAST of mRNA_M-pyrifera_M_contig112233.2564.1 vs. uniprot
Match: A0A0F9TJF6_9ZZZZ (Uncharacterized protein (Fragment) n=1 Tax=marine sediment metagenome TaxID=412755 RepID=A0A0F9TJF6_9ZZZZ) HSP 1 Score: 75.5 bits (184), Expect = 6.890e-14 Identity = 40/92 (43.48%), Postives = 54/92 (58.70%), Query Frame = 1
Query: 13 DQLYSNYI---LSIPLHCAHPAHIVESTTLASARPPPLTYEADLPSCCLDRGDKSTLSSLQLETVRYVGQRHEQTLADNSRAGYFCGDGTGM 279
+ LY Y + IP HP +V+S +A+ PPP TY ++PS + G +S +QLE+V Y GQ HE+ L D SR GYF GDGTG+
Sbjct: 833 EDLYEGYRPERVEIPGSQRHPTPLVQSAAMAAVSPPPATYSPNIPSKVIKEG---RISDIQLESVVYSGQSHEEFLEDGSRRGYFIGDGTGV 921
BLAST of mRNA_M-pyrifera_M_contig112233.2564.1 vs. uniprot
Match: UPI001E67901D (protein strawberry notch homolog 1-like isoform X1 n=1 Tax=Procambarus clarkii TaxID=6728 RepID=UPI001E67901D) HSP 1 Score: 74.3 bits (181), Expect = 1.730e-13 Identity = 38/97 (39.18%), Postives = 59/97 (60.82%), Query Frame = 1
Query: 7 EDDQL-----YSNYI-LSIPLHCAHPAHIVESTTLASARPPPLTYEADLPSCCLDRGDKSTLSSLQLETVRYVGQRHEQTLADNSRAGYFCGDGTGM 279
EDD + YS+Y+ + + HP +VE+ +++S PP + Y+ D+P +D G LS+LQLE++ Y Q+HEQ L D +RAG+ GDG G+
Sbjct: 427 EDDDMGIAETYSDYMPTKLKVGIKHPDQVVETASMSSVEPPDVWYDMDIPDSSIDTGK---LSALQLESITYASQQHEQFLPDGTRAGFLIGDGAGV 520
BLAST of mRNA_M-pyrifera_M_contig112233.2564.1 vs. uniprot
Match: A0A8J5ND44_HOMAM (Strawberry notch 1-like n=16 Tax=Astacidea TaxID=6712 RepID=A0A8J5ND44_HOMAM) HSP 1 Score: 73.9 bits (180), Expect = 2.380e-13 Identity = 36/89 (40.45%), Postives = 57/89 (64.04%), Query Frame = 1
Query: 16 QLYSNYILS-IPLHCAHPAHIVESTTLASARPPPLTYEADLPSCCLDRGDKSTLSSLQLETVRYVGQRHEQTLADNSRAGYFCGDGTGM 279
+ YS+Y+ S + + HP +VE+ +++S PP + YE ++P +D G LS+LQLE++ Y Q+HEQ L D +RAG+ GDG G+
Sbjct: 625 ETYSDYMPSKLKVGIKHPDQVVETASMSSVEPPDVWYEMEIPDTSIDTGK---LSALQLESITYTSQQHEQFLPDGTRAGFLIGDGAGV 710
BLAST of mRNA_M-pyrifera_M_contig112233.2564.1 vs. uniprot
Match: A0A0P5TE37_9CRUS (Putative Strawberry notch n=3 Tax=Daphnia magna TaxID=35525 RepID=A0A0P5TE37_9CRUS) HSP 1 Score: 72.8 bits (177), Expect = 5.940e-13 Identity = 38/89 (42.70%), Postives = 57/89 (64.04%), Query Frame = 1
Query: 16 QLYSNYI-LSIPLHCAHPAHIVESTTLASARPPPLTYEADLPSCCLDRGDKSTLSSLQLETVRYVGQRHEQTLADNSRAGYFCGDGTGM 279
+ Y++Y+ + + HP +VE+ +LAS PP + Y+ +P +D G +LS+LQLE++ Y Q+HEQTL D SRAGY GDG G+
Sbjct: 252 ETYADYMPTKVKIGRKHPDPVVETASLASVAPPDVWYKLAIPEESIDSG---SLSALQLESITYSCQQHEQTLPDGSRAGYLIGDGAGV 337
BLAST of mRNA_M-pyrifera_M_contig112233.2564.1 vs. uniprot
Match: A0A0P5BEC0_9CRUS (Protein strawberry notch n=6 Tax=Daphnia magna TaxID=35525 RepID=A0A0P5BEC0_9CRUS) HSP 1 Score: 72.8 bits (177), Expect = 6.010e-13 Identity = 38/89 (42.70%), Postives = 57/89 (64.04%), Query Frame = 1
Query: 16 QLYSNYI-LSIPLHCAHPAHIVESTTLASARPPPLTYEADLPSCCLDRGDKSTLSSLQLETVRYVGQRHEQTLADNSRAGYFCGDGTGM 279
+ Y++Y+ + + HP +VE+ +LAS PP + Y+ +P +D G +LS+LQLE++ Y Q+HEQTL D SRAGY GDG G+
Sbjct: 252 ETYADYMPTKVKIGRKHPDPVVETASLASVAPPDVWYKLAIPEESIDSG---SLSALQLESITYSCQQHEQTLPDGSRAGYLIGDGAGV 337
BLAST of mRNA_M-pyrifera_M_contig112233.2564.1 vs. uniprot
Match: A0A2P2IC24_9CRUS (Protein strawberry notch homolog 1-like (Fragment) n=1 Tax=Hirondellea gigas TaxID=1518452 RepID=A0A2P2IC24_9CRUS) HSP 1 Score: 72.4 bits (176), Expect = 7.810e-13 Identity = 39/89 (43.82%), Postives = 56/89 (62.92%), Query Frame = 1
Query: 16 QLYSNYILS-IPLHCAHPAHIVESTTLASARPPPLTYEADLPSCCLDRGDKSTLSSLQLETVRYVGQRHEQTLADNSRAGYFCGDGTGM 279
+ ++NY S + + HP +VES ++AS PP + Y LP+ +D G LS+LQLET+ YVGQ+HE L D +RAG+ GDG G+
Sbjct: 134 ETFANYKPSKLKIGREHPDLVVESASMASVEPPDVYYRPKLPAQLIDDG---RLSALQLETITYVGQKHECILPDGNRAGFLVGDGAGV 219
BLAST of mRNA_M-pyrifera_M_contig112233.2564.1 vs. uniprot
Match: A0A6A7FWW7_9CRUS (Protein strawberry notch homolog 1-like (Fragment) n=3 Tax=Hirondellea gigas TaxID=1518452 RepID=A0A6A7FWW7_9CRUS) HSP 1 Score: 72.4 bits (176), Expect = 8.200e-13 Identity = 39/89 (43.82%), Postives = 56/89 (62.92%), Query Frame = 1
Query: 16 QLYSNYILS-IPLHCAHPAHIVESTTLASARPPPLTYEADLPSCCLDRGDKSTLSSLQLETVRYVGQRHEQTLADNSRAGYFCGDGTGM 279
+ ++NY S + + HP +VES ++AS PP + Y LP+ +D G LS+LQLET+ YVGQ+HE L D +RAG+ GDG G+
Sbjct: 203 ETFANYKPSKLKIGREHPDLVVESASMASVEPPDVYYRPKLPAQLIDDG---RLSALQLETITYVGQKHECILPDGNRAGFLVGDGAGV 288
BLAST of mRNA_M-pyrifera_M_contig112233.2564.1 vs. uniprot
Match: A0A6G3MDQ0_HENSL (Protein strawberry notch homolog 1 (Trinotate prediction) (Fragment) n=1 Tax=Henneguya salminicola TaxID=69463 RepID=A0A6G3MDQ0_HENSL) HSP 1 Score: 70.5 bits (171), Expect = 3.820e-12 Identity = 37/87 (42.53%), Postives = 54/87 (62.07%), Query Frame = 1
Query: 22 YSNYI-LSIPLHCAHPAHIVESTTLASARPPPLTYEADLPSCCLDRGDKSTLSSLQLETVRYVGQRHEQTLADNSRAGYFCGDGTGM 279
Y +Y+ + + HP +VES++L+ PP + Y+ LP+ +++G LSSLQLE+V Y Q+HE L D SRAGY GDG G+
Sbjct: 127 YDDYVPTKLTIGLKHPDCVVESSSLSVVSPPDVKYQLSLPNSVIEKG---MLSSLQLESVVYACQKHEDFLPDGSRAGYLIGDGPGV 210 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig112233.2564.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig112233.2564.1 >prot_M-pyrifera_M_contig112233.2564.1 ID=prot_M-pyrifera_M_contig112233.2564.1|Name=mRNA_M-pyrifera_M_contig112233.2564.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=93bp QLEDDQLYSNYILSIPLHCAHPAHIVESTTLASARPPPLTYEADLPSCCLback to top mRNA from alignment at M-pyrifera_M_contig112233:214..492+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig112233.2564.1 ID=mRNA_M-pyrifera_M_contig112233.2564.1|Name=mRNA_M-pyrifera_M_contig112233.2564.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=279bp|location=Sequence derived from alignment at M-pyrifera_M_contig112233:214..492+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig112233:214..492+ >mRNA_M-pyrifera_M_contig112233.2564.1 ID=mRNA_M-pyrifera_M_contig112233.2564.1|Name=mRNA_M-pyrifera_M_contig112233.2564.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=558bp|location=Sequence derived from alignment at M-pyrifera_M_contig112233:214..492+ (Macrocystis pyrifera P11B4 male)back to top |