prot_M-pyrifera_M_contig112069.2527.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig112069.2527.1
Unique Nameprot_M-pyrifera_M_contig112069.2527.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length137
Homology
BLAST of mRNA_M-pyrifera_M_contig112069.2527.1 vs. uniprot
Match: A0A3D5DIC4_9GAMM (Proline--tRNA ligase n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A3D5DIC4_9GAMM)

HSP 1 Score: 201 bits (511), Expect = 2.630e-59
Identity = 97/129 (75.19%), Postives = 112/129 (86.82%), Query Frame = 0
Query:    1 GCYGIGVSRIVAAAIEQNYDENGIIWPTAIAPFHLAIAPVNAHKSTRVRELAETLYERFATAGIDVLLCDNKERPGVMFANLDLIGIPHRLVLSDRGLDAGTLEYKGRTDDASEDIPLDDALGFIQGKL 129
            GCYGIGVSRIVAAA+EQN+DE GIIWP  IAPF LAIAP+NAHKS+RV+++A +LYE+F TA IDVLL D KERPGVMFANL+LIGIPHRLV+SDRGLD+ TLEYKGRTD+ S +IPL   L FI+ KL
Sbjct:  439 GCYGIGVSRIVAAAVEQNHDERGIIWPAPIAPFDLAIAPINAHKSSRVQKMALSLYEKFKTANIDVLLYDGKERPGVMFANLELIGIPHRLVMSDRGLDSETLEYKGRTDETSNNIPLRSCLDFIKDKL 567          
BLAST of mRNA_M-pyrifera_M_contig112069.2527.1 vs. uniprot
Match: A0A3B1ASP9_9ZZZZ (Proline--tRNA ligase n=1 Tax=hydrothermal vent metagenome TaxID=652676 RepID=A0A3B1ASP9_9ZZZZ)

HSP 1 Score: 187 bits (476), Expect = 3.490e-54
Identity = 86/128 (67.19%), Postives = 105/128 (82.03%), Query Frame = 0
Query:    1 GCYGIGVSRIVAAAIEQNYDENGIIWPTAIAPFHLAIAPVNAHKSTRVRELAETLYERFATAGIDVLLCDNKERPGVMFANLDLIGIPHRLVLSDRGLDAGTLEYKGRTDDASEDIPLDDALGFIQGK 128
            GCYGIGVSR+VA+AIEQN+D+ GIIWP AIAPFH+AI P+N HKS R+R+  +TLY     AG DVLL D KERPGVMFA+++LIGIPHR+V+ +RGLDAGTLEYKGR+D   +DIPL+ A  F+Q K
Sbjct:  439 GCYGIGVSRVVASAIEQNHDDRGIIWPDAIAPFHVAIVPMNMHKSQRLRDAVDTLYNELTAAGFDVLLDDRKERPGVMFADMELIGIPHRIVIGERGLDAGTLEYKGRSDTDKQDIPLETATRFLQEK 566          
BLAST of mRNA_M-pyrifera_M_contig112069.2527.1 vs. uniprot
Match: A0A7C7QHU5_9GAMM (Proline--tRNA ligase n=1 Tax=Chromatiales bacterium TaxID=2026725 RepID=A0A7C7QHU5_9GAMM)

HSP 1 Score: 176 bits (445), Expect = 2.350e-53
Identity = 83/129 (64.34%), Postives = 101/129 (78.29%), Query Frame = 0
Query:    1 GCYGIGVSRIVAAAIEQNYDENGIIWPTAIAPFHLAIAPVNAHKSTRVRELAETLYERFATAGIDVLLCDNKERPGVMFANLDLIGIPHRLVLSDRGLDAGTLEYKGRTDDASEDIPLDDALGFIQGKL 129
            GCYGIGVSR+VAAAIEQN+D+ GIIWP AIAPF LA+ P+N HKS R+R+  E LY   A  GI+VLL D KER GVMFA+++LIGIPHR+VL +RGLD G +EYK R D  S+DIPLD  + ++Q KL
Sbjct:   76 GCYGIGVSRVVAAAIEQNHDDKGIIWPEAIAPFQLALLPMNMHKSERLRDAVEALYAELAAVGIEVLLDDRKERAGVMFADMELIGIPHRIVLGERGLDKGMVEYKARRDANSQDIPLDGIVRYLQEKL 204          
BLAST of mRNA_M-pyrifera_M_contig112069.2527.1 vs. uniprot
Match: A0A3M1DL80_9GAMM (Proline--tRNA ligase n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A3M1DL80_9GAMM)

HSP 1 Score: 184 bits (467), Expect = 7.090e-53
Identity = 84/127 (66.14%), Postives = 103/127 (81.10%), Query Frame = 0
Query:    1 GCYGIGVSRIVAAAIEQNYDENGIIWPTAIAPFHLAIAPVNAHKSTRVRELAETLYERFATAGIDVLLCDNKERPGVMFANLDLIGIPHRLVLSDRGLDAGTLEYKGRTDDASEDIPLDDALGFIQG 127
            GCYGIGVSRIVAAAIEQN+DE GI+WP A+APF LA+ P+N HKS R+RE AE LY     AG++VL  D +ERPGVMF +++LIGIPHRLVLSDRGLDAG+ EY+GR D+AS D+PL+    F++G
Sbjct:  438 GCYGIGVSRIVAAAIEQNHDERGIVWPAAMAPFQLALVPINMHKSQRLREAAEALYRELVEAGVEVLFDDRRERPGVMFNDMELIGIPHRLVLSDRGLDAGSAEYRGRRDEASTDVPLEGLTDFLRG 564          
BLAST of mRNA_M-pyrifera_M_contig112069.2527.1 vs. uniprot
Match: A0A3D5Q3I8_9GAMM (Proline--tRNA ligase (Fragment) n=1 Tax=Marinobacter sp. TaxID=50741 RepID=A0A3D5Q3I8_9GAMM)

HSP 1 Score: 175 bits (443), Expect = 1.480e-52
Identity = 83/125 (66.40%), Postives = 100/125 (80.00%), Query Frame = 0
Query:    1 GCYGIGVSRIVAAAIEQNYDENGIIWPTAIAPFHLAIAPVNAHKSTRVRELAETLYERFATAGIDVLLCDNKERPGVMFANLDLIGIPHRLVLSDRGLDAGTLEYKGRTDDASEDIPLDDALGFI 125
            GCYGIGVSRIVAAAIEQN+DE GIIWP AIAPF +A+  +NAHKS  VRE  + LYE+   AG DV+L D  ERPGV FA+++L+GIPHR+V+S+RGL AGTLEYKGR D   +DIPL+ AL F+
Sbjct:  110 GCYGIGVSRIVAAAIEQNHDEQGIIWPEAIAPFEVALVTLNAHKSEVVRETGDKLYEQLRQAGFDVILDDRNERPGVKFADMELMGIPHRIVVSERGLKAGTLEYKGRRDADKQDIPLEQALSFL 234          
BLAST of mRNA_M-pyrifera_M_contig112069.2527.1 vs. uniprot
Match: A0A7V2S8W9_9GAMM (Proline--tRNA ligase n=1 Tax=Aeromonadales bacterium TaxID=2268177 RepID=A0A7V2S8W9_9GAMM)

HSP 1 Score: 181 bits (460), Expect = 2.650e-52
Identity = 83/129 (64.34%), Postives = 103/129 (79.84%), Query Frame = 0
Query:    1 GCYGIGVSRIVAAAIEQNYDENGIIWPTAIAPFHLAIAPVNAHKSTRVRELAETLYERFATAGIDVLLCDNKERPGVMFANLDLIGIPHRLVLSDRGLDAGTLEYKGRTDDASEDIPLDDALGFIQGKL 129
            GCYGIGVSR VAAAIEQN+DE GIIWP AIAPFHLA+ P+N H+S RV++  E LY+   T G++VL  D KERPGVMF +++LIGIPHRLV+ +R +D   +EYKGRTD+ SE+IPLD A+ FI+ KL
Sbjct:  378 GCYGIGVSRTVAAAIEQNHDERGIIWPLAIAPFHLALVPINYHRSERVQQACEQLYQELTTLGVEVLFDDRKERPGVMFNDMELIGIPHRLVIGERAMDNNEIEYKGRTDEVSENIPLDSAVDFIKDKL 506          
BLAST of mRNA_M-pyrifera_M_contig112069.2527.1 vs. uniprot
Match: A7C6A6_9GAMM (Prolyl-tRNA synthetase n=1 Tax=Beggiatoa sp. PS TaxID=422289 RepID=A7C6A6_9GAMM)

HSP 1 Score: 172 bits (435), Expect = 3.920e-52
Identity = 80/129 (62.02%), Postives = 101/129 (78.29%), Query Frame = 0
Query:    1 GCYGIGVSRIVAAAIEQNYDENGIIWPTAIAPFHLAIAPVNAHKSTRVRELAETLYERFATAGIDVLLCDNKERPGVMFANLDLIGIPHRLVLSDRGLDAGTLEYKGRTDDASEDIPLDDALGFIQGKL 129
            GCYGIGVSR+VAAAIEQN+DE+GIIWP +IAPF + + P++ HKS R+RE AE +Y +  +AGIDVL  D +ER GVMFAN DLIGIPHRLV+ + GLD G +EYKGR D  +  IP+ +A+ FIQ +L
Sbjct:   53 GCYGIGVSRLVAAAIEQNHDEHGIIWPQSIAPFSVILLPMSMHKSQRLREAAEAMYNQLQSAGIDVLFDDRRERAGVMFANADLIGIPHRLVIGESGLDKGEIEYKGRRDQKAHSIPMAEAVSFIQTQL 181          
BLAST of mRNA_M-pyrifera_M_contig112069.2527.1 vs. uniprot
Match: A0A1G0G7M2_9GAMM (Proline--tRNA ligase n=1 Tax=Gammaproteobacteria bacterium RBG_16_51_14 TaxID=1798265 RepID=A0A1G0G7M2_9GAMM)

HSP 1 Score: 181 bits (460), Expect = 7.930e-52
Identity = 87/129 (67.44%), Postives = 103/129 (79.84%), Query Frame = 0
Query:    1 GCYGIGVSRIVAAAIEQNYDENGIIWPTAIAPFHLAIAPVNAHKSTRVRELAETLYERFATAGIDVLLCDNKERPGVMFANLDLIGIPHRLVLSDRGLDAGTLEYKGRTDDASEDIPLDDALGFIQGKL 129
            GCYGIGVSRIVAAAIEQN+DE GIIWP AIAPF LA+ P+N HKS R+R+     Y     AGI+VLL D KERPGVMFA+ +LIG+PHRLV S+RGLDAGT+EYKGR D  +++IPL DA+ FI+ KL
Sbjct:  439 GCYGIGVSRIVAAAIEQNHDEYGIIWPQAIAPFQLALIPINMHKSQRLRDAVIPFYHDLQNAGIEVLLDDRKERPGVMFADAELIGLPHRLVYSERGLDAGTIEYKGRRDRENQEIPLADAIAFIRSKL 567          
BLAST of mRNA_M-pyrifera_M_contig112069.2527.1 vs. uniprot
Match: UPI00084A01D7 (proline--tRNA ligase n=1 Tax=Candidatus Marithrix sp. Canyon 246 TaxID=1827136 RepID=UPI00084A01D7)

HSP 1 Score: 178 bits (451), Expect = 8.490e-52
Identity = 82/127 (64.57%), Postives = 101/127 (79.53%), Query Frame = 0
Query:    1 GCYGIGVSRIVAAAIEQNYDENGIIWPTAIAPFHLAIAPVNAHKSTRVRELAETLYERFATAGIDVLLCDNKERPGVMFANLDLIGIPHRLVLSDRGLDAGTLEYKGRTDDASEDIPLDDALGFIQG 127
            GCYGIGVSR+VAA IEQN+D+NGIIWP AIAPF +A+ P+N HKS R+R+ AE LY +   AGIDVL  D KERPGVMFAN +L+GIPHR+V+ DRGLD   +EYKGR D+ S++IP+D  + FI G
Sbjct:  291 GCYGIGVSRLVAATIEQNHDKNGIIWPEAIAPFSVALLPMNMHKSQRLRDAAEDLYNKLQAAGIDVLFDDRKERPGVMFANAELMGIPHRIVIGDRGLDKSEVEYKGRLDEKSQNIPIDKIIEFIVG 417          
BLAST of mRNA_M-pyrifera_M_contig112069.2527.1 vs. uniprot
Match: A0A7C1Y122_9GAMM (Proline--tRNA ligase n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A7C1Y122_9GAMM)

HSP 1 Score: 181 bits (458), Expect = 1.600e-51
Identity = 86/129 (66.67%), Postives = 102/129 (79.07%), Query Frame = 0
Query:    1 GCYGIGVSRIVAAAIEQNYDENGIIWPTAIAPFHLAIAPVNAHKSTRVRELAETLYERFATAGIDVLLCDNKERPGVMFANLDLIGIPHRLVLSDRGLDAGTLEYKGRTDDASEDIPLDDALGFIQGKL 129
            GCYGIGVSR+VAAAIEQN+D+ GIIWP +IAPF LA+ P+NAHKS RVRE AE LY +F  AGIDVL  D  ER G+MFA+++LIGIPHRLV+ DRGLD G LEYKGR D  + D+PLD  +  I+ KL
Sbjct:  442 GCYGIGVSRVVAAAIEQNHDDRGIIWPQSIAPFQLALLPMNAHKSERVRETAEHLYAKFTAAGIDVLYDDRGERAGIMFADMELIGIPHRLVIGDRGLDKGCLEYKGRRDADNTDVPLDSVVAVIREKL 570          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig112069.2527.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A3D5DIC4_9GAMM2.630e-5975.19Proline--tRNA ligase n=1 Tax=Gammaproteobacteria b... [more]
A0A3B1ASP9_9ZZZZ3.490e-5467.19Proline--tRNA ligase n=1 Tax=hydrothermal vent met... [more]
A0A7C7QHU5_9GAMM2.350e-5364.34Proline--tRNA ligase n=1 Tax=Chromatiales bacteriu... [more]
A0A3M1DL80_9GAMM7.090e-5366.14Proline--tRNA ligase n=1 Tax=Gammaproteobacteria b... [more]
A0A3D5Q3I8_9GAMM1.480e-5266.40Proline--tRNA ligase (Fragment) n=1 Tax=Marinobact... [more]
A0A7V2S8W9_9GAMM2.650e-5264.34Proline--tRNA ligase n=1 Tax=Aeromonadales bacteri... [more]
A7C6A6_9GAMM3.920e-5262.02Prolyl-tRNA synthetase n=1 Tax=Beggiatoa sp. PS Ta... [more]
A0A1G0G7M2_9GAMM7.930e-5267.44Proline--tRNA ligase n=1 Tax=Gammaproteobacteria b... [more]
UPI00084A01D78.490e-5264.57proline--tRNA ligase n=1 Tax=Candidatus Marithrix ... [more]
A0A7C1Y122_9GAMM1.600e-5166.67Proline--tRNA ligase n=1 Tax=Gammaproteobacteria b... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.930.10coord: 1..24
e-value: 3.3E-40
score: 140.1
NoneNo IPR availablePANTHERPTHR42753FAMILY NOT NAMEDcoord: 1..122
NoneNo IPR availableSUPERFAMILY52954Class II aaRS ABD-relatedcoord: 21..128
IPR004154Anticodon-bindingPFAMPF03129HGTP_anticodoncoord: 35..126
e-value: 6.4E-15
score: 55.1
IPR036621Anticodon-binding domain superfamilyGENE3D3.40.50.800coord: 25..112
e-value: 3.3E-40
score: 140.1

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig112069contigM-pyrifera_M_contig112069:175..585 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig112069.2527.1mRNA_M-pyrifera_M_contig112069.2527.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig112069 175..585 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig112069.2527.1 ID=prot_M-pyrifera_M_contig112069.2527.1|Name=mRNA_M-pyrifera_M_contig112069.2527.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=137bp
GCYGIGVSRIVAAAIEQNYDENGIIWPTAIAPFHLAIAPVNAHKSTRVRE
LAETLYERFATAGIDVLLCDNKERPGVMFANLDLIGIPHRLVLSDRGLDA
GTLEYKGRTDDASEDIPLDDALGFIQGKLLPSAVTS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004154Anticodon-bd
IPR036621Anticodon-bd_dom_sf