mRNA_M-pyrifera_M_contig101150.245.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig101150.245.1 vs. uniprot
Match: A0A7S1C583_9STRA (Beta-amylase n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C583_9STRA) HSP 1 Score: 160 bits (406), Expect = 1.740e-44 Identity = 80/141 (56.74%), Postives = 94/141 (66.67%), Query Frame = 1 Query: 10 IPTYVMLNLDFITNENTLANPNKLSSNLATLAGAGVEGVMADVWWGLTEPSS-QAYNFSAYVELANIVHSSSLKLQVVMSAHSCGGNVGDACNIPIPSWVRQTNP---FYVDREGGKDAEYVSLFFDSVALSDGRTPVQAY 420 IP YVML LD + + N L +PN L S L LA GV GVM DVWWGL E S+ QAYNFSAY ELA++V + + VMS H CGGNVGD CNIP+PSW R T+ +Y D +G KD EY+SLF D A GRTP+Q Y Sbjct: 66 IPVYVMLQLDVVNSNNELNDPNGLKSQLQQLASGGVAGVMGDVWWGLCERSAPQAYNFSAYKELADMVQGAGMSYHPVMSFHQCGGNVGDKCNIPLPSWARSTSTDGVWYQDAQGNKDYEYISLFADETAAFGGRTPIQIY 206
BLAST of mRNA_M-pyrifera_M_contig101150.245.1 vs. uniprot
Match: A0A7R9ZVU5_9DINO (Beta-amylase (Fragment) n=1 Tax=Pyrodinium bahamense TaxID=73915 RepID=A0A7R9ZVU5_9DINO) HSP 1 Score: 145 bits (367), Expect = 1.940e-41 Identity = 72/139 (51.80%), Postives = 93/139 (66.91%), Query Frame = 1 Query: 7 AIPTYVMLNLDFITNENTLANPNKLSSNLATLAGAGVEGVMADVWWGLTEPSSQAYNFSAYVELANIVHSSSLKLQVVMSAHSCGGNVGDACNIPIPSWVRQTNP-FYVDREGGKDAEYVSLFFDSVALSDGRTPVQAY 420 A +VML LD +TNE L L+S L L GA V+G+M DVWWG+TEP+ +AYNF AY +L + +K+Q V S HSCGGNVGD+CNIP+PS+V T +Y D EG +D EY+SLF D+ + GRTP+Q Y Sbjct: 35 ASKVFVMLPLDTVTNEGDLKEQGTLASQLDQLKGAQVDGIMTDVWWGVTEPNPKAYNFHAYQQLVKMAKDRGMKVQFVTSFHSCGGNVGDSCNIPLPSFVTGTGGIWYKDHEGNEDKEYISLFADNATVG-GRTPLQMY 172
BLAST of mRNA_M-pyrifera_M_contig101150.245.1 vs. uniprot
Match: A0A6A2YX00_HIBSY (Beta-amylase n=1 Tax=Hibiscus syriacus TaxID=106335 RepID=A0A6A2YX00_HIBSY) HSP 1 Score: 143 bits (360), Expect = 9.090e-40 Identity = 72/143 (50.35%), Postives = 91/143 (63.64%), Query Frame = 1 Query: 10 IPTYVMLNLDFITNENTLANPNKLSSNLATLAGAGVEGVMADVWWGLTEPSSQA-YNFSAYVELANIVHSSSLKLQVVMSAHSCGGNVGDACNIPIPSWVRQT---NP--FYVDREGGKDAEYVSLFFDSVALSDGRTPVQAY 420 +P +VML LD +T+ L P ++++L L AGVEGVM D WWGL E YN+ Y EL +V LKLQVVMS H CGGNVGD+C+IP+P WV Q NP Y D+ G ++ EY+SL DSV + GRTP+QAY Sbjct: 81 VPVFVMLPLDTVTHGGNLNKPRAMNASLMALKSAGVEGVMVDAWWGLVEKDGPLNYNWEGYAELVKMVEKHGLKLQVVMSFHQCGGNVGDSCSIPLPPWVLQEISKNPDLVYTDKSGKRNPEYISLGCDSVPVLRGRTPIQAY 223
BLAST of mRNA_M-pyrifera_M_contig101150.245.1 vs. uniprot
Match: A0A438ITS1_VITVI (Beta-amylase n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438ITS1_VITVI) HSP 1 Score: 141 bits (356), Expect = 5.580e-39 Identity = 69/146 (47.26%), Postives = 90/146 (61.64%), Query Frame = 1 Query: 1 GHAIPTYVMLNLDFITNENTLANPNKLSSNLATLAGAGVEGVMADVWWGLTEPSS-QAYNFSAYVELANIVHSSSLKLQVVMSAHSCGGNVGDACNIPIPSWV-----RQTNPFYVDREGGKDAEYVSLFFDSVALSDGRTPVQAY 420 G +P +VML LD ++ L P ++++L L AGVEGVM D WWGL E YN+ Y EL +V LKLQVVMS H CGGNVGD+C+IP+P WV + T+ Y DR G ++ EY+SL DS+ + GRTP+Q Y Sbjct: 78 GSRVPVFVMLPLDTVSFGGNLNKPRAMNASLMALKSAGVEGVMVDAWWGLVEKDGPMKYNWEGYAELVQMVQRHGLKLQVVMSFHQCGGNVGDSCSIPLPPWVLEEISKNTDLVYTDRSGRRNPEYISLGCDSIPVLRGRTPIQVY 223
BLAST of mRNA_M-pyrifera_M_contig101150.245.1 vs. uniprot
Match: A0A834TVE7_9FABA (Beta-amylase n=1 Tax=Senna tora TaxID=362788 RepID=A0A834TVE7_9FABA) HSP 1 Score: 147 bits (370), Expect = 5.940e-39 Identity = 74/146 (50.68%), Postives = 94/146 (64.38%), Query Frame = 1 Query: 1 GHAIPTYVMLNLDFITNENTLANPNKLSSNLATLAGAGVEGVMADVWWGLTEPSSQ-AYNFSAYVELANIVHSSSLKLQVVMSAHSCGGNVGDACNIPIPSWVRQT---NP--FYVDREGGKDAEYVSLFFDSVALSDGRTPVQAY 420 G +P YVML LD +T E L ++++L L AGVEGVM D WWGL E +YN+ AY+EL ++V LKLQVVMS H CGGNVGD+C+IP+P WV + NP Y DR G ++ EY+SL DS+ + GRTPVQ Y Sbjct: 77 GRRVPVYVMLPLDTVTMEGRLNKARAMNASLMALKSAGVEGVMVDAWWGLVEKDGPFSYNWDAYLELVHMVQKHGLKLQVVMSFHQCGGNVGDSCSIPLPPWVMEEISKNPDLIYTDRSGRRNPEYISLGCDSLPVLKGRTPVQVY 222
BLAST of mRNA_M-pyrifera_M_contig101150.245.1 vs. uniprot
Match: A0A2P5YQ45_GOSBA (Beta-amylase n=1 Tax=Gossypium barbadense TaxID=3634 RepID=A0A2P5YQ45_GOSBA) HSP 1 Score: 140 bits (352), Expect = 9.290e-39 Identity = 73/143 (51.05%), Postives = 89/143 (62.24%), Query Frame = 1 Query: 10 IPTYVMLNLDFITNENTLANPNKLSSNLATLAGAGVEGVMADVWWGLTEPSSQA-YNFSAYVELANIVHSSSLKLQVVMSAHSCGGNVGDACNIPIPSWVRQT---NP--FYVDREGGKDAEYVSLFFDSVALSDGRTPVQAY 420 +P YVML LD IT +L P + ++L L AGVEGVM D WWGL E YN+ Y EL +V LKLQVVMS H CGGNVGD+C+IP+P WV + NP Y DR G ++ EY+SL DSV + GR P+QAY Sbjct: 81 VPVYVMLPLDTITLGGSLNKPRAMKTSLMALKSAGVEGVMVDAWWGLVEKDGPLNYNWEGYAELVKMVEKHGLKLQVVMSFHQCGGNVGDSCSIPLPPWVLEEISKNPDLVYTDRLGRRNPEYISLGCDSVPVLRGRKPIQAY 223
BLAST of mRNA_M-pyrifera_M_contig101150.245.1 vs. uniprot
Match: A0A8K0MJH9_9ROSA (Uncharacterized protein n=1 Tax=Rhamnella rubrinervis TaxID=2594499 RepID=A0A8K0MJH9_9ROSA) HSP 1 Score: 146 bits (368), Expect = 1.360e-38 Identity = 72/143 (50.35%), Postives = 93/143 (65.03%), Query Frame = 1 Query: 10 IPTYVMLNLDFITNENTLANPNKLSSNLATLAGAGVEGVMADVWWGLTEPSSQA-YNFSAYVELANIVHSSSLKLQVVMSAHSCGGNVGDACNIPIPSWVRQT---NP--FYVDREGGKDAEYVSLFFDSVALSDGRTPVQAY 420 +P +VML LD +T+ +L P ++++L L AGVEGVM D WWGL E YN+ Y EL ++VH LKLQVVMS H CGGNVGD+CNIP+P WV + NP Y DR G ++ EY+SL DS+ + GRTP+Q Y Sbjct: 92 VPVFVMLPLDTVTHGGSLNKPRAMNASLMALKSAGVEGVMVDAWWGLVEKDGPLKYNWEGYAELVHMVHKHGLKLQVVMSFHQCGGNVGDSCNIPLPPWVLEETSKNPDLVYTDRSGRRNPEYISLGCDSMPVLRGRTPIQVY 234
BLAST of mRNA_M-pyrifera_M_contig101150.245.1 vs. uniprot
Match: A0A7J6V518_THATH (Beta-amylase (Fragment) n=1 Tax=Thalictrum thalictroides TaxID=46969 RepID=A0A7J6V518_THATH) HSP 1 Score: 140 bits (353), Expect = 1.910e-38 Identity = 69/143 (48.25%), Postives = 92/143 (64.34%), Query Frame = 1 Query: 10 IPTYVMLNLDFITNENTLANPNKLSSNLATLAGAGVEGVMADVWWGLTEPSS-QAYNFSAYVELANIVHSSSLKLQVVMSAHSCGGNVGDACNIPIPSWVRQT---NP--FYVDREGGKDAEYVSLFFDSVALSDGRTPVQAY 420 +P Y+ML LD +T L P L+++L L +GVEGVM D WWGL E + YN+S YV+L +V LK+QVVMS H CGGNVGD+C+IP+P WV + NP Y D+ G ++ EY+SL DS+ + GRTP+Q Y Sbjct: 87 VPVYIMLPLDTVTIAGNLHRPKALNASLMALKSSGVEGVMVDAWWGLVEKNGPMKYNWSGYVDLIQMVEKHGLKIQVVMSFHQCGGNVGDSCSIPLPPWVLEEISKNPDIVYTDKSGRRNPEYISLGCDSLPVLAGRTPIQVY 229
BLAST of mRNA_M-pyrifera_M_contig101150.245.1 vs. uniprot
Match: A0A388MCS4_CHABU (Beta-amylase n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388MCS4_CHABU) HSP 1 Score: 147 bits (371), Expect = 2.310e-38 Identity = 73/146 (50.00%), Postives = 95/146 (65.07%), Query Frame = 1 Query: 1 GHAIPTYVMLNLDFITNENTLANPNKLSSNLATLAGAGVEGVMADVWWGLTEPSS-QAYNFSAYVELANIVHSSSLKLQVVMSAHSCGGNVGDACNIPIPSWVRQT---NP--FYVDREGGKDAEYVSLFFDSVALSDGRTPVQAY 420 G+ +P Y+ML LD + NTL P L ++L L AGVEGVM DVWWG+ E Y ++AY +L +VH + LK+QVVMS H CGGNVGD+C IP+P WV Q NP Y D+ G ++ EY+SL DS+ + GR+PVQAY Sbjct: 394 GNGVPVYIMLPLDTVNMNNTLTRPRALRASLTALKSAGVEGVMVDVWWGIVEGQEPHKYRWTAYQDLVKMVHDAGLKMQVVMSFHQCGGNVGDSCLIPLPQWVLQEIEKNPDIVYTDKAGKRNLEYLSLGCDSLPVLRGRSPVQAY 539
BLAST of mRNA_M-pyrifera_M_contig101150.245.1 vs. uniprot
Match: A0A6A2X8K5_HIBSY (Beta-amylase n=2 Tax=Hibiscus syriacus TaxID=106335 RepID=A0A6A2X8K5_HIBSY) HSP 1 Score: 145 bits (365), Expect = 3.670e-38 Identity = 73/143 (51.05%), Postives = 93/143 (65.03%), Query Frame = 1 Query: 10 IPTYVMLNLDFITNENTLANPNKLSSNLATLAGAGVEGVMADVWWGLTEPSSQA-YNFSAYVELANIVHSSSLKLQVVMSAHSCGGNVGDACNIPIPSWVRQT---NP--FYVDREGGKDAEYVSLFFDSVALSDGRTPVQAY 420 +P +VML LD +T+ +L P +S++L L AGVEGVM D WWGL E YN+ YVEL +V LKLQVVMS H CGGNVGD+C+IP+P WV Q NP Y D+ G ++ EY+SL DS+ + GRTP+QAY Sbjct: 99 VPVFVMLPLDTVTHGGSLNKPRAMSASLMALKSAGVEGVMVDAWWGLVEKDGPLNYNWEGYVELVKMVEKHGLKLQVVMSFHQCGGNVGDSCSIPLPPWVLQEISKNPDLVYTDKSGRRNPEYISLGCDSLPVLRGRTPIQAY 241 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig101150.245.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig101150.245.1 >prot_M-pyrifera_M_contig101150.245.1 ID=prot_M-pyrifera_M_contig101150.245.1|Name=mRNA_M-pyrifera_M_contig101150.245.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=132bp MLNLDFITNENTLANPNKLSSNLATLAGAGVEGVMADVWWGLTEPSSQAYback to top mRNA from alignment at M-pyrifera_M_contig101150:251..670+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig101150.245.1 ID=mRNA_M-pyrifera_M_contig101150.245.1|Name=mRNA_M-pyrifera_M_contig101150.245.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=420bp|location=Sequence derived from alignment at M-pyrifera_M_contig101150:251..670+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig101150:251..670+ >mRNA_M-pyrifera_M_contig101150.245.1 ID=mRNA_M-pyrifera_M_contig101150.245.1|Name=mRNA_M-pyrifera_M_contig101150.245.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=792bp|location=Sequence derived from alignment at M-pyrifera_M_contig101150:251..670+ (Macrocystis pyrifera P11B4 male)back to top |