mRNA_M-pyrifera_M_contig101145.243.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig101145.243.1 vs. uniprot
Match: A0A517PG46_9PLAN (Nickel uptake substrate-specific transmembrane region n=4 Tax=Gimesia TaxID=1649453 RepID=A0A517PG46_9PLAN) HSP 1 Score: 462 bits (1188), Expect = 4.830e-154 Identity = 223/223 (100.00%), Postives = 223/223 (100.00%), Query Frame = 1 Query: 1 RAFTLDRDQSGDQLTKPPAFPDHPVRLKLDGTTPLKVKVQTPDGKPLAGIKVYPWLLNKPGEPRELNLGSLFYGNHLLEQTTDAEGITVFKWIPHWQKQQLVIWPHTEDYNNVRGTYHPATGKGLLTMELDQLVPISGQVRQADGTPAKGITVTAVGDGYQADTFRESVTTDDDGRYSLKVSPYMVYLVVAGNQTQASTPRTDFAVMPEQPVTDLDFKLRPAT 669 RAFTLDRDQSGDQLTKPPAFPDHPVRLKLDGTTPLKVKVQTPDGKPLAGIKVYPWLLNKPGEPRELNLGSLFYGNHLLEQTTDAEGITVFKWIPHWQKQQLVIWPHTEDYNNVRGTYHPATGKGLLTMELDQLVPISGQVRQADGTPAKGITVTAVGDGYQADTFRESVTTDDDGRYSLKVSPYMVYLVVAGNQTQASTPRTDFAVMPEQPVTDLDFKLRPAT Sbjct: 207 RAFTLDRDQSGDQLTKPPAFPDHPVRLKLDGTTPLKVKVQTPDGKPLAGIKVYPWLLNKPGEPRELNLGSLFYGNHLLEQTTDAEGITVFKWIPHWQKQQLVIWPHTEDYNNVRGTYHPATGKGLLTMELDQLVPISGQVRQADGTPAKGITVTAVGDGYQADTFRESVTTDDDGRYSLKVSPYMVYLVVAGNQTQASTPRTDFAVMPEQPVTDLDFKLRPAT 429
BLAST of mRNA_M-pyrifera_M_contig101145.243.1 vs. uniprot
Match: A0A518FGM5_9PLAN (Nickel uptake substrate-specific transmembrane region n=1 Tax=Gimesia panareensis TaxID=2527978 RepID=A0A518FGM5_9PLAN) HSP 1 Score: 355 bits (911), Expect = 3.260e-113 Identity = 169/223 (75.78%), Postives = 191/223 (85.65%), Query Frame = 1 Query: 1 RAFTLDRDQSGDQLTKPPAFPDHPVRLKLDGTTPLKVKVQTPDGKPLAGIKVYPWLLNKPGEPRELNLGSLFYGNHLLEQTTDAEGITVFKWIPHWQKQQLVIWPHTEDYNNVRGTYHPATGKGLLTMELDQLVPISGQVRQADGTPAKGITVTAVGDGYQADTFRESVTTDDDGRYSLKVSPYMVYLVVAGNQTQASTPRTDFAVMPEQPVTDLDFKLRPAT 669 RAFTL+R Q GDQLTKPPA P+HPVRLKLDG TPLKVKVQT DGKPLAGIKVYPW L K GEPRE NL SLFY + LLEQTTD G TVFKWIPHWQ++Q V+WP TEDY + RGTY+P TGKG+LT+EL+QLVPISGQVR ++G+PA+GI VTAVGDGYQ D E+VTTDDDGRY++KVSP+M YLVVAGNQT AS P+TDF V+P QPVT LDF+LRPAT Sbjct: 183 RAFTLERGQYGDQLTKPPALPEHPVRLKLDGATPLKVKVQTSDGKPLAGIKVYPWYLTKSGEPREFNLSSLFYESKLLEQTTDEAGTTVFKWIPHWQQEQFVVWPRTEDYTHERGTYNPKTGKGVLTIELEQLVPISGQVRLSNGSPARGIQVTAVGDGYQTDFSPETVTTDDDGRYTIKVSPHMAYLVVAGNQTLASAPQTDFTVLPHQPVTGLDFQLRPAT 405
BLAST of mRNA_M-pyrifera_M_contig101145.243.1 vs. uniprot
Match: A0A2E2C7R1_9PLAN (Thioredoxin domain-containing protein n=5 Tax=Planctomycetaceae TaxID=126 RepID=A0A2E2C7R1_9PLAN) HSP 1 Score: 345 bits (886), Expect = 1.500e-109 Identity = 165/223 (73.99%), Postives = 187/223 (83.86%), Query Frame = 1 Query: 1 RAFTLDRDQSGDQLTKPPAFPDHPVRLKLDGTTPLKVKVQTPDGKPLAGIKVYPWLLNKPGEPRELNLGSLFYGNHLLEQTTDAEGITVFKWIPHWQKQQLVIWPHTEDYNNVRGTYHPATGKGLLTMELDQLVPISGQVRQADGTPAKGITVTAVGDGYQADTFRESVTTDDDGRYSLKVSPYMVYLVVAGNQTQASTPRTDFAVMPEQPVTDLDFKLRPAT 669 RAFTL+R Q DQLTKPPA PDHPVRLKLDG TPLKVKVQ+P+G+ LAGIKVYPW L KPGEP E NL SLFYG+ LLEQTTD EGI VFKWIPHWQKQQ V+WP +DY+ R TY+PAT G+LTMEL+QLVPISGQVR ++G+PAKGITVTA G GYQ D+FRE+VTTD +GRY++K PYMVYLVVAG+QTQAS P T FAV+P PVTDLDF+ PAT Sbjct: 188 RAFTLERGQHVDQLTKPPALPDHPVRLKLDGATPLKVKVQSPEGQALAGIKVYPWYLTKPGEPGEFNLSSLFYGSDLLEQTTDTEGIAVFKWIPHWQKQQFVVWPRMDDYSKTRATYNPATDNGVLTMELEQLVPISGQVRLSNGSPAKGITVTAAGVGYQIDSFRETVTTDANGRYTIKAWPYMVYLVVAGDQTQASVPHTCFAVLPHHPVTDLDFQFVPAT 410
BLAST of mRNA_M-pyrifera_M_contig101145.243.1 vs. uniprot
Match: A0A517R868_9PLAN (Nickel uptake substrate-specific transmembrane region n=2 Tax=Gimesia alba TaxID=2527973 RepID=A0A517R868_9PLAN) HSP 1 Score: 266 bits (680), Expect = 2.350e-79 Identity = 126/223 (56.50%), Postives = 167/223 (74.89%), Query Frame = 1 Query: 1 RAFTLDRDQSGDQLTKPPAFPDHPVRLKLDGTTPLKVKVQTPDGKPLAGIKVYPWLLNKPGEPRELNLGSLFYGNHLLEQTTDAEGITVFKWIPHWQKQQLVIWPHTEDYNNVRGTYHPATGKGLLTMELDQLVPISGQVRQADGTPAKGITVTAVGDGYQADTFRESVTTDDDGRYSLKVSPYMVYLVVAGNQTQASTPRTDFAVMPEQPVTDLDFKLRPAT 669 +A+ L R QSGD++T+PPAFPDHPV+LKL+G PLKV+++ DG P+AG+KVYPWLL KP + ++LNL + L+EQTTDAEG VF+WIP WQK L IWP +++ RG Y P TG G LT++L++LVPISG++ DG+PAKGI+V+A G+GYQ D+FR+S TD+ GRY +K +P VYLVV N ASTP T FA+ P +P+ +LDF+LRPAT Sbjct: 255 KAYVLPRGQSGDKITRPPAFPDHPVQLKLEGAQPLKVQLKETDGTPIAGVKVYPWLLQKPDQTQDLNLS---FFTSLVEQTTDAEGTVVFQWIPGWQKLPLTIWPRDKEHVLQRGNYDPKTGDGTLTIKLEKLVPISGRITLPDGSPAKGISVSASGEGYQFDSFRKSAHTDEQGRYVIKAAPNQVYLVVVNNGEWASTPHTGFALWPGKPIENLDFQLRPAT 474
BLAST of mRNA_M-pyrifera_M_contig101145.243.1 vs. uniprot
Match: A0A517V664_9PLAN (Nickel uptake substrate-specific transmembrane region n=1 Tax=Gimesia algae TaxID=2527971 RepID=A0A517V664_9PLAN) HSP 1 Score: 263 bits (672), Expect = 1.930e-78 Identity = 127/223 (56.95%), Postives = 156/223 (69.96%), Query Frame = 1 Query: 1 RAFTLDRDQSGDQLTKPPAFPDHPVRLKLDGTTPLKVKVQTPDGKPLAGIKVYPWLLNKPGEPRELNLGSLFYGNHLLEQTTDAEGITVFKWIPHWQKQQLVIWPHTEDYNNVRGTYHPATGKGLLTMELDQLVPISGQVRQADGTPAKGITVTAVGDGYQADTFRESVTTDDDGRYSLKVSPYMVYLVVAGNQTQASTPRTDFAVMPEQPVTDLDFKLRPAT 669 +AFTL R+Q GDQL KPP P+ P+RL LDGT PLKVKV+ DG PL G V PW L K GEPR+LNL S FY L++ TD G F WIPHWQK L IWPH ++Y + R TY P G+G LTM+L++LVP+SG+V DG+PAKGI V A G GYQ D+F ++V TDD GRYS P VYLV+AGN+ ++ P T FAV P +P+ +LDFKL+PAT Sbjct: 209 KAFTLSREQVGDQLVKPPVVPESPIRLTLDGTQPLKVKVEEADGTPLTGFHVVPWYLKKEGEPRDLNL-SYFYS--LVQSQTDKSGTASFDWIPHWQKTALTIWPHNQEYEHQRSTYDPQKGQGTLTMKLEKLVPVSGKVTLPDGSPAKGIPVAADGAGYQFDSFHKTVQTDDQGRYSFNAEPNQVYLVIAGNEKWSAAPHTGFAVWPGKPIQNLDFKLQPAT 428
BLAST of mRNA_M-pyrifera_M_contig101145.243.1 vs. uniprot
Match: A0A518I4R9_9PLAN (Nickel uptake substrate-specific transmembrane region n=1 Tax=Gimesia fumaroli TaxID=2527976 RepID=A0A518I4R9_9PLAN) HSP 1 Score: 256 bits (655), Expect = 4.770e-76 Identity = 119/223 (53.36%), Postives = 168/223 (75.34%), Query Frame = 1 Query: 1 RAFTLDRDQSGDQLTKPPAFPDHPVRLKLDGTTPLKVKVQTPDGKPLAGIKVYPWLLNKPGEPRELNLGSLFYGNHLLEQTTDAEGITVFKWIPHWQKQQLVIWPHTEDYNNVRGTYHPATGKGLLTMELDQLVPISGQVRQADGTPAKGITVTAVGDGYQADTFRESVTTDDDGRYSLKVSPYMVYLVVAGNQTQASTPRTDFAVMPEQPVTDLDFKLRPAT 669 +A+ L R QSGD++T+PPA PDH V+LKL+G PL+V+++ PDG P+AG+ V PW + KP +P++LNL S FY L++QTTDAEG VF WIP W + L IWP +++ + RG+Y P TG+G LT++L++LVPISG++ DG+PAKGI+V+A G+GYQ D+FR+S TD+ GRY +K +P VYLVV ++ AS P T FA+ P++P+ +LDF+LRPAT Sbjct: 199 KAYVLPRGQSGDKITRPPALPDHSVQLKLEGAQPLRVQLKEPDGTPIAGVNVSPWYIKKPDQPQDLNL-SYFY--KLIQQTTDAEGNVVFGWIPRWHQTPLTIWPRDQEHVHQRGSYDPKTGEGTLTIKLEKLVPISGKITLPDGSPAKGISVSASGEGYQFDSFRKSAHTDEQGRYVIKAAPNQVYLVVVNDKKWASAPHTGFALWPDKPIENLDFQLRPAT 418
BLAST of mRNA_M-pyrifera_M_contig101145.243.1 vs. uniprot
Match: A0A517X3Q6_9PLAN (Nickel uptake substrate-specific transmembrane region n=2 Tax=Gimesia aquarii TaxID=2527964 RepID=A0A517X3Q6_9PLAN) HSP 1 Score: 257 bits (656), Expect = 7.380e-76 Identity = 122/223 (54.71%), Postives = 164/223 (73.54%), Query Frame = 1 Query: 1 RAFTLDRDQSGDQLTKPPAFPDHPVRLKLDGTTPLKVKVQTPDGKPLAGIKVYPWLLNKPGEPRELNLGSLFYGNHLLEQTTDAEGITVFKWIPHWQKQQLVIWPHTEDYNNVRGTYHPATGKGLLTMELDQLVPISGQVRQADGTPAKGITVTAVGDGYQADTFRESVTTDDDGRYSLKVSPYMVYLVVAGNQTQASTPRTDFAVMPEQPVTDLDFKLRPAT 669 +A+ L R QSGDQ+TKPP PDHP+RL LDGT PL+V ++ + KPLAGIKVYPWLL KP +P++LNL S F L+++TTD G VF+WIPHWQK + IWP +++ + RG Y P T +G LT++L++LVP+ G+V DG+PAK I +T G G+Q D+FR +V TD +GRY++K +P MVYLVV ++ ASTP T FA+ P +P+ +LDFKLRPAT Sbjct: 292 KAYVLPRGQSGDQITKPPELPDHPIRLTLDGTQPLEVHIKGTNDKPLAGIKVYPWLLKKPDQPQDLNL-SFFI--KLVQETTDKSGKAVFQWIPHWQKTPITIWPRDKEHVHQRGNYDPKTAEGSLTLKLEKLVPLGGRVTLPDGSPAKEIAITVSGKGHQIDSFRATVKTDKEGRYTIKAAPNMVYLVVVKDKMWASTPHTGFALWPGKPIRNLDFKLRPAT 511
BLAST of mRNA_M-pyrifera_M_contig101145.243.1 vs. uniprot
Match: A0A2E2C936_9PLAN (Uncharacterized protein n=4 Tax=Planctomycetaceae TaxID=126 RepID=A0A2E2C936_9PLAN) HSP 1 Score: 255 bits (652), Expect = 1.340e-75 Identity = 125/223 (56.05%), Postives = 152/223 (68.16%), Query Frame = 1 Query: 1 RAFTLDRDQSGDQLTKPPAFPDHPVRLKLDGTTPLKVKVQTPDGKPLAGIKVYPWLLNKPGEPRELNLGSLFYGNHLLEQTTDAEGITVFKWIPHWQKQQLVIWPHTEDYNNVRGTYHPATGKGLLTMELDQLVPISGQVRQADGTPAKGITVTAVGDGYQADTFRESVTTDDDGRYSLKVSPYMVYLVVAGNQTQASTPRTDFAVMPEQPVTDLDFKLRPAT 669 RAFTL R+Q GDQL KPPA P+HP+RL LDGT PLKVKV+ DG PL G V PW L K GEPR+LNL S FY L++ TD G F WIPHWQK L IWP ++Y + R Y P +G LTM+L++LVP+SG+V DG+PAKGI V A G GYQ D+F ++V TDD GRY P VYL++AGN+ + P T FAV P P+ +LDFKL+PAT Sbjct: 209 RAFTLSREQVGDQLVKPPAVPEHPIRLTLDGTQPLKVKVEDADGSPLTGFNVAPWYLKKEGEPRDLNL-SYFYS--LVQAQTDESGTASFGWIPHWQKTALTIWPRNQEYEHQRSMYDPQKDQGRLTMKLEKLVPVSGKVTLPDGSPAKGIPVAADGAGYQFDSFHKTVQTDDQGRYLFNAEPNQVYLMIAGNEKWRAAPHTGFAVWPGTPIQNLDFKLQPAT 428
BLAST of mRNA_M-pyrifera_M_contig101145.243.1 vs. uniprot
Match: A0A517ZZC5_9PLAN (Nickel uptake substrate-specific transmembrane region n=8 Tax=Gimesia TaxID=1649453 RepID=A0A517ZZC5_9PLAN) HSP 1 Score: 244 bits (623), Expect = 1.640e-71 Identity = 117/223 (52.47%), Postives = 154/223 (69.06%), Query Frame = 1 Query: 1 RAFTLDRDQSGDQLTKPPAFPDHPVRLKLDGTTPLKVKVQTPDGKPLAGIKVYPWLLNKPGEPRELNLGSLFYGNHLLEQTTDAEGITVFKWIPHWQKQQLVIWPHTEDYNNVRGTYHPATGKGLLTMELDQLVPISGQVRQADGTPAKGITVTAVGDGYQADTFRESVTTDDDGRYSLKVSPYMVYLVVAGNQTQASTPRTDFAVMPEQPVTDLDFKLRPAT 669 R++ L R+Q GDQ K P PDHP+RL LDG PL +KV GKPL G++V PW LNK G+PR++NL S FY +L++ TD G+ F WIPHWQ+ ++ +WP Y ++R Y P KG LTM L +LVP+SG+V DG+PA GI ++A G+GY D+FR + TTDD GRY+++ P MVYLV AGNQ A+ P+T FA+ P+QP T LDF+LRPAT Sbjct: 207 RSYELSREQYGDQQAKRPEVPDHPIRLTLDGAQPLSIKVVDSAGKPLPGVEVAPWYLNKEGQPRDVNL-SFFY--NLIQAKTDQSGMVNFDWIPHWQQARITMWPRGNGYAHLRTMYDPEKDKGKLTMRLQKLVPLSGKVSLPDGSPAAGIPISASGEGYMIDSFRGATTTDDQGRYTIEAPPGMVYLVTAGNQKWAAAPQTGFALQPDQPRTSLDFQLRPAT 426
BLAST of mRNA_M-pyrifera_M_contig101145.243.1 vs. uniprot
Match: A0A6I6AAX9_9PLAN (Uncharacterized protein n=1 Tax=Gimesia benthica TaxID=2608982 RepID=A0A6I6AAX9_9PLAN) HSP 1 Score: 239 bits (610), Expect = 1.120e-69 Identity = 115/223 (51.57%), Postives = 151/223 (67.71%), Query Frame = 1 Query: 1 RAFTLDRDQSGDQLTKPPAFPDHPVRLKLDGTTPLKVKVQTPDGKPLAGIKVYPWLLNKPGEPRELNLGSLFYGNHLLEQTTDAEGITVFKWIPHWQKQQLVIWPHTEDYNNVRGTYHPATGKGLLTMELDQLVPISGQVRQADGTPAKGITVTAVGDGYQADTFRESVTTDDDGRYSLKVSPYMVYLVVAGNQTQASTPRTDFAVMPEQPVTDLDFKLRPAT 669 R++ L R+Q GDQ K P P+HP+RL LDGT PL +KV GKPL G+ V PW L K G+PR++NL S FY L++ TD G F WIPHWQ+ + +WP + Y ++R Y P KG LTM L +LVP+SG+V DG+PA GI ++A G+GY D+FR + TTDD G Y+++ +P MVYLV AGN+ A+ P+T FA+ P+QP T LDFKLRPAT Sbjct: 207 RSYELSREQYGDQQAKRPEVPNHPIRLTLDGTQPLSIKVVDTAGKPLPGVNVAPWYLKKEGQPRDVNL-SFFY--KLIQAETDQSGTVNFDWIPHWQQTPITMWPREKGYAHLRTMYDPEKDKGKLTMRLQKLVPLSGKVSLPDGSPAAGIPISASGEGYMIDSFRGTTTTDDQGHYTIEAAPNMVYLVTAGNEKWAAAPQTGFALRPDQPRTSLDFKLRPAT 426 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig101145.243.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig101145.243.1 >prot_M-pyrifera_M_contig101145.243.1 ID=prot_M-pyrifera_M_contig101145.243.1|Name=mRNA_M-pyrifera_M_contig101145.243.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=223bp RAFTLDRDQSGDQLTKPPAFPDHPVRLKLDGTTPLKVKVQTPDGKPLAGIback to top mRNA from alignment at M-pyrifera_M_contig101145:3..671+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig101145.243.1 ID=mRNA_M-pyrifera_M_contig101145.243.1|Name=mRNA_M-pyrifera_M_contig101145.243.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=669bp|location=Sequence derived from alignment at M-pyrifera_M_contig101145:3..671+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig101145:3..671+ >mRNA_M-pyrifera_M_contig101145.243.1 ID=mRNA_M-pyrifera_M_contig101145.243.1|Name=mRNA_M-pyrifera_M_contig101145.243.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1338bp|location=Sequence derived from alignment at M-pyrifera_M_contig101145:3..671+ (Macrocystis pyrifera P11B4 male)back to top |