mRNA_M-pyrifera_M_contig111640.2424.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig111640.2424.1 vs. uniprot
Match: A0A5P1F5Q7_ASPOF (JmjC domain-containing protein n=2 Tax=Asparagus officinalis TaxID=4686 RepID=A0A5P1F5Q7_ASPOF) HSP 1 Score: 96.3 bits (238), Expect = 1.140e-23 Identity = 46/94 (48.94%), Postives = 59/94 (62.77%), Query Frame = 1
Query: 19 VKEEGSTIPWIAVDPSSEVSVEM------FKDYGKNCSPLEVHVREGEVLYLPSMWYHQVAQREDEEGKVIAMNWWYDMAFDIKYAYFAFLEAL 282
++E +PW +VDP E EM F Y P + VR GE+LYLPSMW+H V Q DE G+ IA+N+WYDM FDIKYAYF FL+++
Sbjct: 1 MEEPEREVPWCSVDPYPETEEEMARQRREFPMYFDGPEPFKCTVRAGEMLYLPSMWFHHVRQSPDENGRCIAVNYWYDMQFDIKYAYFNFLQSI 94
BLAST of mRNA_M-pyrifera_M_contig111640.2424.1 vs. uniprot
Match: A0A7N0SWW6_KALFE (JmjC domain-containing protein n=2 Tax=Kalanchoe fedtschenkoi TaxID=63787 RepID=A0A7N0SWW6_KALFE) HSP 1 Score: 101 bits (252), Expect = 1.510e-23 Identity = 48/99 (48.48%), Postives = 65/99 (65.66%), Query Frame = 1
Query: 4 RKFAL-VKEEGSTIPWIAVDPSSEVSVE-----MFKDYGKNCSPLEVHVREGEVLYLPSMWYHQVAQREDEEGKVIAMNWWYDMAFDIKYAYFAFLEAL 282
RKF L + E +PW +V+P + V+ F Y K P EV V+ GE+LYLPSMW+H V Q D +G+ IA+N+WYDM FDIKYAYF+FL+++
Sbjct: 232 RKFTLELDEPARDVPWCSVNPHPSLEVKDSEVSQFPMYFKGPKPFEVTVKAGEILYLPSMWFHHVRQSPDSQGRTIAINYWYDMQFDIKYAYFSFLQSM 330
BLAST of mRNA_M-pyrifera_M_contig111640.2424.1 vs. uniprot
Match: A0A1Y1HU72_KLENI (Jmjc domain-containing protein 7 n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1HU72_KLENI) HSP 1 Score: 98.2 bits (243), Expect = 1.580e-22 Identity = 42/84 (50.00%), Postives = 59/84 (70.24%), Query Frame = 1
Query: 34 STIPWIAVDPSSEVSVEMFKDYGKNCSPLEVHVREGEVLYLPSMWYHQVAQREDEEGKVIAMNWWYDMAFDIKYAYFAFLEALS 285
ST+PW++VDP + + F Y + PL V+ GE+LYLPSM+YH V Q+ DE+G+ IA+N+WYDM FD+KYAY+ E L+
Sbjct: 236 STVPWVSVDPDDPGTSDRFPLYDQGPPPLRCVVKAGELLYLPSMYYHHVKQKPDEQGRTIAINFWYDMEFDVKYAYYKLAEKLT 319
BLAST of mRNA_M-pyrifera_M_contig111640.2424.1 vs. uniprot
Match: F4PQW0_CAVFA (Transcription factor jumonji n=1 Tax=Cavenderia fasciculata (strain SH3) TaxID=1054147 RepID=F4PQW0_CAVFA) HSP 1 Score: 95.9 bits (237), Expect = 1.860e-21 Identity = 44/91 (48.35%), Postives = 63/91 (69.23%), Query Frame = 1
Query: 13 ALVKEEGSTIPWIAVDPSSEVSVEMFKDYG--KNCSPLEVHVREGEVLYLPSMWYHQVAQR-EDEEGKVIAMNWWYDMAFDIKYAYFAFLE 276
A++ E+ + IPWI VDP+ + K YG + C PL V V+EGE+LYLPS++YH+VAQR +D+E K IA+N+W+DM + Y Y+ FL
Sbjct: 262 AVLDEDQTPIPWIPVDPTHPIEANRAKGYGMVERCHPLHVEVKEGEILYLPSLYYHRVAQRGDDKEHKTIAINYWFDMKYGPNYVYYQFLR 352
BLAST of mRNA_M-pyrifera_M_contig111640.2424.1 vs. uniprot
Match: A0A7J7MV76_9MAGN (JmjC domain-containing protein n=1 Tax=Kingdonia uniflora TaxID=39325 RepID=A0A7J7MV76_9MAGN) HSP 1 Score: 91.3 bits (225), Expect = 2.470e-21 Identity = 45/100 (45.00%), Postives = 62/100 (62.00%), Query Frame = 1
Query: 1 TRKFALVKEEGST-IPWIAVDP-----SSEVSVEMFKDYGKNCSPLEVHVREGEVLYLPSMWYHQVAQREDEEGKVIAMNWWYDMAFDIKYAYFAFLEAL 282
T++F L E+ +PW +V+P S + + F Y P E V+ GE+LYLPSMW+H V Q D+ G IA+N+WYDM FDIKYAYF FL+++
Sbjct: 17 TKEFTLELEKPLRYVPWCSVNPYPTSDSKDREMSSFPLYFNGPKPFECTVKAGEILYLPSMWFHYVRQSPDDRGLAIAVNYWYDMQFDIKYAYFNFLQSI 116
BLAST of mRNA_M-pyrifera_M_contig111640.2424.1 vs. uniprot
Match: A0A0E9NKW2_SAICN (JmjC domain-containing protein n=2 Tax=Saitoella complicata (strain BCRC 22490 / CBS 7301 / JCM 7358 / NBRC 10748 / NRRL Y-17804) TaxID=698492 RepID=A0A0E9NKW2_SAICN) HSP 1 Score: 94.7 bits (234), Expect = 2.530e-21 Identity = 45/94 (47.87%), Postives = 63/94 (67.02%), Query Frame = 1
Query: 7 KFALVKEEGS-TIPWIAVDPSSEVSVEMFKDYGKNCSPLEVHVREGEVLYLPSMWYHQVAQREDEEGKVIAMNWWYDMAFDIK-YAYFAFLEAL 282
K A+V + +IPW+ VDP++ F ++ C PL V ++ GEVLYLP++W+H V QR DEEGKVIA+NWWYDM + YA F F++A+
Sbjct: 207 KLAVVPDSPPLSIPWLCVDPTAPEQSPTFSEF---CRPLRVDLQPGEVLYLPALWFHHVGQRSDEEGKVIAVNWWYDMCYSQPLYAQFNFMKAI 297
BLAST of mRNA_M-pyrifera_M_contig111640.2424.1 vs. uniprot
Match: UPI001C271688 (bifunctional peptidase and (3S)-lysyl hydroxylase JMJD7 n=2 Tax=Salvia TaxID=21880 RepID=UPI001C271688) HSP 1 Score: 95.5 bits (236), Expect = 2.960e-21 Identity = 48/100 (48.00%), Postives = 63/100 (63.00%), Query Frame = 1
Query: 7 KFALVKEE-GSTIPWIAVDP-----SSEVSVEMFKDYGKNCSPLEVHVREGEVLYLPSMWYHQVAQREDEEGKVIAMNWWYDMAFDIKYAYFAFLEALSS 288
+F+L E+ S +PW +VDP +E F Y P EV V+ GE+LYLPSMW+H V Q D+ G IA+N+WYDM FDIKYAYF FL+++ S
Sbjct: 231 EFSLELEDPNSKVPWCSVDPYPLPQDKRREMEKFPLYFNGPKPFEVSVKAGEMLYLPSMWFHHVRQSLDDTGITIAINYWYDMQFDIKYAYFNFLQSIPS 330
BLAST of mRNA_M-pyrifera_M_contig111640.2424.1 vs. uniprot
Match: A0A6I9SY18_SESIN (jmjC domain-containing protein 7 n=1 Tax=Sesamum indicum TaxID=4182 RepID=A0A6I9SY18_SESIN) HSP 1 Score: 95.5 bits (236), Expect = 3.130e-21 Identity = 45/86 (52.33%), Postives = 56/86 (65.12%), Query Frame = 1
Query: 40 IPWIAVDP-----SSEVSVEMFKDYGKNCSPLEVHVREGEVLYLPSMWYHQVAQREDEEGKVIAMNWWYDMAFDIKYAYFAFLEAL 282
+PW +VDP + VE F Y P EV V+ GE+LYLPSMW+H V Q DE G IA+N+WYDM FDIKYAYF FL+++
Sbjct: 242 VPWCSVDPYPLPEEKQREVEKFPLYFNGPKPFEVTVKAGEMLYLPSMWFHHVLQSPDETGLTIAINYWYDMQFDIKYAYFNFLQSI 327
BLAST of mRNA_M-pyrifera_M_contig111640.2424.1 vs. uniprot
Match: UPI00015CC4FF (jmjC domain-containing protein 7 isoform X1 n=3 Tax=Vitis TaxID=3603 RepID=UPI00015CC4FF) HSP 1 Score: 95.1 bits (235), Expect = 3.910e-21 Identity = 42/87 (48.28%), Postives = 57/87 (65.52%), Query Frame = 1
Query: 40 IPWIAVDP-----SSEVSVEMFKDYGKNCSPLEVHVREGEVLYLPSMWYHQVAQREDEEGKVIAMNWWYDMAFDIKYAYFAFLEALS 285
+PW +V+P + + + F Y PLE V+ GE+LYLPSMW+H V Q D G+ IA+N+WYDM FDIKYAYF FL+++S
Sbjct: 241 VPWCSVNPYPSPETKDAEISQFPLYFNGPKPLECTVKAGEILYLPSMWFHHVKQTPDSSGRTIAINYWYDMQFDIKYAYFNFLQSIS 327
BLAST of mRNA_M-pyrifera_M_contig111640.2424.1 vs. uniprot
Match: A0A6A6KBK9_HEVBR (JmjC domain-containing protein n=1 Tax=Hevea brasiliensis TaxID=3981 RepID=A0A6A6KBK9_HEVBR) HSP 1 Score: 91.3 bits (225), Expect = 6.340e-21 Identity = 42/86 (48.84%), Postives = 55/86 (63.95%), Query Frame = 1
Query: 40 IPWIAVDP-----SSEVSVEMFKDYGKNCSPLEVHVREGEVLYLPSMWYHQVAQREDEEGKVIAMNWWYDMAFDIKYAYFAFLEAL 282
+PW +V+P + E + F Y P E V GEVLYLPSMW+H V Q D+EG IA+N+WYDM FD+KYAYF FL+++
Sbjct: 60 VPWCSVNPYPSPEAKESEMAKFPLYFNGPKPFECTVNAGEVLYLPSMWFHHVRQSSDDEGCTIAINYWYDMQFDVKYAYFNFLQSI 145 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig111640.2424.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig111640.2424.1 >prot_M-pyrifera_M_contig111640.2424.1 ID=prot_M-pyrifera_M_contig111640.2424.1|Name=mRNA_M-pyrifera_M_contig111640.2424.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=98bp TRKFALVKEEGSTIPWIAVDPSSEVSVEMFKDYGKNCSPLEVHVREGEVLback to top mRNA from alignment at M-pyrifera_M_contig111640:97..390+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig111640.2424.1 ID=mRNA_M-pyrifera_M_contig111640.2424.1|Name=mRNA_M-pyrifera_M_contig111640.2424.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=294bp|location=Sequence derived from alignment at M-pyrifera_M_contig111640:97..390+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig111640:97..390+ >mRNA_M-pyrifera_M_contig111640.2424.1 ID=mRNA_M-pyrifera_M_contig111640.2424.1|Name=mRNA_M-pyrifera_M_contig111640.2424.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=588bp|location=Sequence derived from alignment at M-pyrifera_M_contig111640:97..390+ (Macrocystis pyrifera P11B4 male)back to top |