mRNA_M-pyrifera_M_contig111465.2381.1 (mRNA) Macrocystis pyrifera P11B4 male
|
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig111465.2381.1 vs. uniprot
Match: A0A0L0G2Z3_9EUKA (PNPLA domain-containing protein n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0G2Z3_9EUKA) HSP 1 Score: 115 bits (288), Expect = 1.560e-27 Identity = 68/154 (44.16%), Postives = 89/154 (57.79%), Query Frame = 1
Query: 1 QLHHLHRHAHFSGASGGALAAAALAVDVNLDDIKEFAIACAQHCHAHW--SHAFRLRQYVVDCVDWVQQQEPR----LASRANGRLHVAVTTLPFMRRRRYSHYRDDSHLRSVLLASCCMSPLGGLPFMLDGALVFDGGITDFQPTLHAQAVTV 444
Q + L + A F G+S GAL AAA+ VDV+ +KE+ + C + +AFRLR+Y+VD VD Q+ P+ + R+ VAVT LP RYS Y D H + VLLASC P+ G PF+LDG LV DGG+ DFQP L +TV
Sbjct: 45 QRYELDKKAKFVGSSAGALTAAAILVDVDFISLKEYTLGCIRDVREPVLNMNAFRLRKYIVDIVD--QKLGPKEFKHYQQQLEERMEVAVTALPGCHGFRYSKYTDYDHFKDVLLASCTAPPIAGFPFVLDGTLVADGGLADFQPLLDENTITV 196
BLAST of mRNA_M-pyrifera_M_contig111465.2381.1 vs. uniprot
Match: A0A7S0TN48_HEMAN (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0TN48_HEMAN) HSP 1 Score: 105 bits (262), Expect = 6.360e-25 Identity = 53/130 (40.77%), Postives = 78/130 (60.00%), Query Frame = 1
Query: 25 AHFSGASGGALAAAALAVDVNLDDIKEFAIACAQHCHAHWSHAFRLRQYVVDCVDWVQQQEPRLASRA-NGRLHVAVTTLPFMRRRRYSHYRDDSHLRSVLLASCCMSPLGGLPFMLDGALVFDGGITDF 411
A F G+S G++ +A L + ++ D IKE + H AF L+ Y+ + +D P A R +++TTLPF+R +R + YRD++HLR LLASCCM+P G+PF LDG VFDGG++D+
Sbjct: 60 ARFMGSSAGSMVSAGLGLGLDFDKIKEMQLGMVDRTHGRIGAAFNLKGYLQEIMD---DMLPHNAHDVLQNRCEISITTLPFLRNKRVNIYRDNTHLRQALLASCCMTPFAGMPFRLDGEFVFDGGLSDW 186
BLAST of mRNA_M-pyrifera_M_contig111465.2381.1 vs. uniprot
Match: A0A0L0FQH2_9EUKA (PNPLA domain-containing protein n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0FQH2_9EUKA) HSP 1 Score: 99.4 bits (246), Expect = 1.610e-21 Identity = 57/142 (40.14%), Postives = 76/142 (53.52%), Query Frame = 1
Query: 25 AHFSGASGGALAAAALAVDVNLDDIKEFAIACAQHCHAHWSHAFRLRQYVVDCVDWVQQQEPRLASRANGRLHV--AVTTLPFMRRRRYSHYRDDSHLRSVLLASCCMSPLGGLPFMLDGALVFDGGITDFQPTLHAQAVTV 444
A F+GAS GALA L + ++ +KE + A+ + +R Y+ +D V +E L + H AVT LP RYS RD H + VLLASCC P+ G PFMLDG LV DGGI DFQP + ++T+
Sbjct: 91 ARFAGASAGALAGVCLVIGSDMQYVKEVCMENLDEVRANPFNGLCIRYYLNRAIDKVVGEERYLKHKEALDAHAESAVTILPGCHGTRYSETRDYDHFKKVLLASCCAPPIAGFPFMLDGKLVIDGGIADFQPLVDDNSITI 232
BLAST of mRNA_M-pyrifera_M_contig111465.2381.1 vs. uniprot
Match: A0A0L0FJ92_9EUKA (Uncharacterized protein n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0FJ92_9EUKA) HSP 1 Score: 93.6 bits (231), Expect = 2.790e-21 Identity = 55/144 (38.19%), Postives = 80/144 (55.56%), Query Frame = 1
Query: 19 RHAHFSGASGGALAAAALAVDVNLDDIKEFAIACAQHCHAHWSHAFRLRQYVVDCVDWVQQQEPRLA--SRANGRLHVAVTTLPFMRRRRYSHYRDDSHLRSVLLASCCMSPLGGLPFMLDGALVFDGGITDFQPTLHAQAVTV 444
+ A F G+S GAL AAA+ +DV+L +K+ F+LR+Y D D + L+ S+ + +L V VT LP RYS YR+ H + V+LASC SP+ G PF+LDG + DGG++DFQP + V++
Sbjct: 36 KRAKFVGSSAGALTAAAIILDVDLIRLKDT--------------PFQLRKYKTDIADEMLGPARFLSNQSKLSEQLEVVVTVLPRCHTLRYSKYRNYEHFKDVMLASCTASPIAGFPFLLDGQICADGGLSDFQPLIDENTVSI 165
BLAST of mRNA_M-pyrifera_M_contig111465.2381.1 vs. uniprot
Match: A0A0S4J309_BODSA (Transmembrane protein, putative n=1 Tax=Bodo saltans TaxID=75058 RepID=A0A0S4J309_BODSA) HSP 1 Score: 97.1 bits (240), Expect = 9.600e-21 Identity = 56/140 (40.00%), Postives = 82/140 (58.57%), Query Frame = 1
Query: 31 FSGASGGALAAAALAVDVNL-DDIKEFAIACAQHCHAHWSHAFRLRQYVVDCV--------DWVQQQEPRLASRANGRLHVAVTTLPFMRRRRYSHYRDDSHLRSVLLASCCMSPLGGLPFML--DGALVFDGGITDFQP 417
F G+S G+LAAA+LA ++ DD+K+FA+ C +H + H +R Y+V + + +QQE LA GRL V TTLPF+ R+ + + D + + L+ASCC++P+ GLPF L G V DGG+ FQP
Sbjct: 73 FCGSSAGSLAAASLASGCHMHDDMKDFAVLCGEHYRSSLWHFMCMRDYLVASIHRFGDRMMETPEQQERTLAGMRGGRLEVYTTTLPFLTRKCMTEFDDLADIEESLIASCCLTPVVGLPFPLRKTGEWVCDGGVRSFQP 212
BLAST of mRNA_M-pyrifera_M_contig111465.2381.1 vs. uniprot
Match: A0A0L0FLC9_9EUKA (Uncharacterized protein n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0FLC9_9EUKA) HSP 1 Score: 82.8 bits (203), Expect = 1.470e-17 Identity = 42/102 (41.18%), Postives = 60/102 (58.82%), Query Frame = 1
Query: 145 SHAFRLRQYVVDCVDWVQQQEPRLA--SRANGRLHVAVTTLPFMRRRRYSHYRDDSHLRSVLLASCCMSPLGGLPFMLDGALVFDGGITDFQPTLHAQAVTV 444
S F+LR+Y D D + L+ S+ + +L V VT LP RYS YR+ H + V+LASC SP+ G PF+LDG + DGG++DFQP + V++
Sbjct: 16 STPFQLRKYKTDIADEMLGPARFLSNQSKLSEQLEVVVTVLPRCHTLRYSKYRNYEHFKDVMLASCTASPIAGFPFLLDGQICADGGLSDFQPLIDENTVSI 117
BLAST of mRNA_M-pyrifera_M_contig111465.2381.1 vs. uniprot
Match: A0A484DSX1_BRELC (PNPLA domain-containing protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DSX1_BRELC) HSP 1 Score: 86.3 bits (212), Expect = 5.760e-17 Identity = 49/145 (33.79%), Postives = 75/145 (51.72%), Query Frame = 1
Query: 13 LHRHAHFSGASGGALAAAALAVDVNLDDIKEFAIACA-QHCHAHWSHAFRLRQYVVDCVDWVQQQEPRLASRANGRLHVAVTTLPFMRRRRYSHYRDDSHLRSVLLASCCMSPLGGLPFMLDGALVFDGGITDFQPTLHAQAVTV 444
L + A G S GAL A LA+ + I+++ + C H + FR+R Y+ D + + + +L + T+L M+ RR + + HL LLASCC +P+ GLPF L+G V DGG+ DFQP ++ VT+
Sbjct: 45 LEKDARLIGCSAGALTATGLALHCDFVAIRDYVLQCIIPKAHVSLASYFRVRTYLRDTLLCHCRTHEFETLNKSQQLTIVYTSLTSMKSRRVTTFESTEHLTETLLASCCATPIAGLPFKLNGEWVMDGGMLDFQPVYDSKTVTI 189
BLAST of mRNA_M-pyrifera_M_contig111465.2381.1 vs. uniprot
Match: A0A3M6VCZ5_9STRA (Uncharacterized protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VCZ5_9STRA) HSP 1 Score: 86.3 bits (212), Expect = 8.090e-17 Identity = 48/145 (33.10%), Postives = 78/145 (53.79%), Query Frame = 1
Query: 13 LHRHAHFSGASGGALAAAALAVDVNLDDIKEFAIA-CAQHCHAHWSHAFRLRQYVVDCVDWVQQQEPRLASRANGRLHVAVTTLPFMRRRRYSHYRDDSHLRSVLLASCCMSPLGGLPFMLDGALVFDGGITDFQPTLHAQAVTV 444
L + A G S GALAA LA+ N D I++F + + H + FR+R ++++ ++ + A+ +L V T+L + RR++ + L L+ASCC +P+ G+PF L+G V DGG+ DFQP + VT+
Sbjct: 474 LEKDARLIGCSAGALAATGLALHCNFDAIRDFVLTDVIPNAHVFPAGYFRVRTFLLNTLEAEGKLHEYEKLNASQQLTVVYTSLSALTSRRHTKFESKQQLTDSLMASCCATPIAGMPFKLNGEWVMDGGMLDFQPVFDDKTVTI 618
BLAST of mRNA_M-pyrifera_M_contig111465.2381.1 vs. uniprot
Match: A0A7S3PS66_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3PS66_9STRA) HSP 1 Score: 85.1 bits (209), Expect = 1.710e-16 Identity = 55/160 (34.38%), Postives = 83/160 (51.88%), Query Frame = 1
Query: 1 QLHHLHRHAHF---SGASGGALAAAALAVDVNLDDIKEFAIACAQHCHAHWS-HAFRLRQYVVDCVDWVQQQEPRLASRAN---------GRLHVAVTTLPFMRRRRYSHYRDDSHLRSVLLASCCMSPLGGLPFMLD--------GALVFDGGITDFQP 417
Q + LH H +G+SGG+L +A LAV+ ++D IK+F + C C + S + F++R+YV + + + N GRL V+VT LP M+ + + + L S +L SC MSPL GLPF ++ G VFDGG+ + QP
Sbjct: 23 QKYGLHEETHCVRCTGSSGGSLVSACLAVNADIDLIKDFFLDCVADCKTNPSVNMFKMREYVKGAFNIASESYEKQHKHRNFHEHENVKKGRLGVSVTLLPSMKNAILTEFSNQQELESAILGSCTMSPLAGLPFRMNKPDDPNVHGKWVFDGGMANIQP 182
BLAST of mRNA_M-pyrifera_M_contig111465.2381.1 vs. uniprot
Match: A0A3F2S4I5_9STRA (PNPLA domain-containing protein n=1 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2S4I5_9STRA) HSP 1 Score: 83.2 bits (204), Expect = 3.410e-16 Identity = 50/149 (33.56%), Postives = 74/149 (49.66%), Query Frame = 1
Query: 1 QLHHLHRHAHFSGASGGALAAAALAVDVNLDDIKEFAIA-CAQHCHAHWSHAFRLRQYVVDCVDWVQQQEPRLASRANGRLHVAVTTLPFMRRRRYSHYRDDSHLRSVLLASCCMSPLGGLPFMLDGALVFDGGITDFQPTLHAQAVTV 444
Q L R+ G S GALAA LA+ + D I++ + H S R+Y++D + + A+ +L V T+L ++ RR + + +HL L ASCC +P+ G+PF L+G V DG I DFQP + VTV
Sbjct: 41 QQFELERNGRLIGCSAGALAATGLALQCDFDAIRDHVLKNVVPKAHGSLSGLMSTREYLMDTLHSQGRLHEYAKLNASQQLTVVYTSLSSVKSRRVTSFASKNHLEKCLKASCCATPIAGMPFRLNGEWVMDGCILDFQPVYDEKTVTV 189 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig111465.2381.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig111465.2381.1 >prot_M-pyrifera_M_contig111465.2381.1 ID=prot_M-pyrifera_M_contig111465.2381.1|Name=mRNA_M-pyrifera_M_contig111465.2381.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=148bp QLHHLHRHAHFSGASGGALAAAALAVDVNLDDIKEFAIACAQHCHAHWSHback to top mRNA from alignment at M-pyrifera_M_contig111465:3..505- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig111465.2381.1 ID=mRNA_M-pyrifera_M_contig111465.2381.1|Name=mRNA_M-pyrifera_M_contig111465.2381.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=503bp|location=Sequence derived from alignment at M-pyrifera_M_contig111465:3..505- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig111465:3..505- >mRNA_M-pyrifera_M_contig111465.2381.1 ID=mRNA_M-pyrifera_M_contig111465.2381.1|Name=mRNA_M-pyrifera_M_contig111465.2381.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=888bp|location=Sequence derived from alignment at M-pyrifera_M_contig111465:3..505- (Macrocystis pyrifera P11B4 male)back to top |