mRNA_M-pyrifera_M_contig10112.237.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig10112.237.1 vs. uniprot
Match: D7FQ53_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQ53_ECTSI) HSP 1 Score: 141 bits (355), Expect = 1.900e-40 Identity = 66/82 (80.49%), Postives = 73/82 (89.02%), Query Frame = 1 Query: 1 MLAKQLLRQDGKGPTLRDPPRARTLLEQGCAQNHGPSCYNLTVMYKNGDDGVASDYKKYRQYREQTEKLAAQLQGVDGNKQA 246 MLAKQLLR DGKGP RDPPRAR LLE+GC+ NHGPSC+NLTVM K GD+GV SDYKKYR+YRE+TE LAAQLQG+DGNKQA Sbjct: 141 MLAKQLLRHDGKGPVPRDPPRARGLLEKGCSHNHGPSCFNLTVMLKKGDEGVPSDYKKYREYREKTESLAAQLQGIDGNKQA 222
BLAST of mRNA_M-pyrifera_M_contig10112.237.1 vs. uniprot
Match: A0A7R9UGB8_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UGB8_9STRA) HSP 1 Score: 77.0 bits (188), Expect = 5.380e-15 Identity = 33/60 (55.00%), Postives = 45/60 (75.00%), Query Frame = 1 Query: 28 DGKGPTLRDPPRARTLLEQGCAQNHGPSCYNLTVMYKNGDDGVASDYKKYRQYREQTEKL 207 D + R+P AR LLE+GC Q HG SC+NL VMYKNGDDGV +D K+++Y+++TE+L Sbjct: 222 DDRSSVPRNPEEARKLLERGCRQAHGASCFNLAVMYKNGDDGVPADAAKFQEYKKETERL 281
BLAST of mRNA_M-pyrifera_M_contig10112.237.1 vs. uniprot
Match: A0A7R9ZRA5_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9ZRA5_9STRA) HSP 1 Score: 68.6 bits (166), Expect = 3.620e-12 Identity = 32/63 (50.79%), Postives = 42/63 (66.67%), Query Frame = 1 Query: 49 RDPPRARTLLEQGCAQN-HGPSCYNLTVMYKNGDDGVASDYKKYRQYREQTEKLAAQLQGVDG 234 RDP RA LL GCA H PSC+NL VMY+NGDDGV +D K +Y+++TE++ + G G Sbjct: 163 RDPQRAEQLLVAGCATGAHAPSCFNLAVMYQNGDDGVPADPAKAEEYKQKTERIIQTIGGFGG 225
BLAST of mRNA_M-pyrifera_M_contig10112.237.1 vs. uniprot
Match: B8BRJ5_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BRJ5_THAPS) HSP 1 Score: 69.7 bits (169), Expect = 4.750e-12 Identity = 32/72 (44.44%), Postives = 46/72 (63.89%), Query Frame = 1 Query: 10 KQLLRQDGKGPTLRDPPRARTLLEQGCAQNHGPSCYNLTVMYKNGDDGVASDYKKYRQYREQTEKLAAQLQG 225 +Q L D + RDP A LL++GC++ H PSCYNL VMY GD+GV D +K + Y+++TE+L + G Sbjct: 285 RQKLEGDERTSLKRDPLYAEQLLQRGCSRGHAPSCYNLAVMYTQGDEGVEKDEEKAKDYQKKTEELVQRFGG 356
BLAST of mRNA_M-pyrifera_M_contig10112.237.1 vs. uniprot
Match: A0A024FSW8_9STRA (Uncharacterized protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024FSW8_9STRA) HSP 1 Score: 67.0 bits (162), Expect = 1.630e-11 Identity = 31/66 (46.97%), Postives = 43/66 (65.15%), Query Frame = 1 Query: 49 RDPPRARTLLEQGCAQNHGPSCYNLTVMYKNGDDGVASDYKKYRQYREQTEKLAAQLQGVDGNKQA 246 RDP RA+ + C N P+CYNL VM+KNGD GV + K Y +Y+++TE+L Q +G+ G K A Sbjct: 174 RDPIRAKKYYAKACDANFAPACYNLAVMFKNGDTGVEKNEKMYEEYKKKTEQLVKQAKGMLGVKVA 239
BLAST of mRNA_M-pyrifera_M_contig10112.237.1 vs. uniprot
Match: A0A448YUH7_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448YUH7_9STRA) HSP 1 Score: 67.0 bits (162), Expect = 3.220e-11 Identity = 32/61 (52.46%), Postives = 41/61 (67.21%), Query Frame = 1 Query: 49 RDPPRARTLLEQGCAQN-HGPSCYNLTVMYKNGDDGVASDYKKYRQYREQTEKLAAQLQGV 228 RDP RA LL+ C H PSC+NLTVMY+NGDDGV +D K +Y+++TEK L G+ Sbjct: 264 RDPKRAEQLLKSACRTGAHAPSCFNLTVMYQNGDDGVPADPVKAEEYKKKTEKAVQTLGGL 324
BLAST of mRNA_M-pyrifera_M_contig10112.237.1 vs. uniprot
Match: A0A7S2PTR6_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2PTR6_9STRA) HSP 1 Score: 66.2 bits (160), Expect = 5.190e-11 Identity = 30/59 (50.85%), Postives = 38/59 (64.41%), Query Frame = 1 Query: 49 RDPPRARTLLEQGCAQNHGPSCYNLTVMYKNGDDGVASDYKKYRQYREQTEKLAAQLQG 225 RDP A LL++GC + H PSCYNL VMY GD+GV D K Y+E+TE+L + G Sbjct: 230 RDPLFAEQLLQRGCQRGHAPSCYNLAVMYTQGDEGVEKDEAKANDYQEKTEELVKRFGG 288
BLAST of mRNA_M-pyrifera_M_contig10112.237.1 vs. uniprot
Match: A0A1E7FBD2_9STRA (Uncharacterized protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FBD2_9STRA) HSP 1 Score: 65.1 bits (157), Expect = 1.520e-10 Identity = 30/61 (49.18%), Postives = 40/61 (65.57%), Query Frame = 1 Query: 49 RDPPRARTLLEQGCAQN-HGPSCYNLTVMYKNGDDGVASDYKKYRQYREQTEKLAAQLQGV 228 RDP RA LL+ C H PSC+NL VMY+NGDDGV D +K +Y+++TE+ L G+ Sbjct: 252 RDPKRAEALLQSACRTGAHAPSCFNLAVMYENGDDGVPKDSEKAEEYKKKTEQAVHTLGGL 312
BLAST of mRNA_M-pyrifera_M_contig10112.237.1 vs. uniprot
Match: A0A7S4AG49_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4AG49_9STRA) HSP 1 Score: 64.3 bits (155), Expect = 3.100e-10 Identity = 31/61 (50.82%), Postives = 39/61 (63.93%), Query Frame = 1 Query: 49 RDPPRARTLLEQGCAQN-HGPSCYNLTVMYKNGDDGVASDYKKYRQYREQTEKLAAQLQGV 228 RDP RA LL+ C H PSC+NL VMY+NGDDGV D K +Y+++TEK L G+ Sbjct: 270 RDPKRAEQLLQAACRTGAHAPSCFNLAVMYQNGDDGVPVDPTKAEEYKKKTEKAVQTLGGM 330
BLAST of mRNA_M-pyrifera_M_contig10112.237.1 vs. uniprot
Match: A0A7S1E0R5_9STRA (Hypothetical protein n=1 Tax=Thalassionema nitzschioides TaxID=33649 RepID=A0A7S1E0R5_9STRA) HSP 1 Score: 61.6 bits (148), Expect = 3.220e-10 Identity = 31/70 (44.29%), Postives = 46/70 (65.71%), Query Frame = 1 Query: 22 RQDGKGPTL-RDPPRARTLLEQGCAQN-HGPSCYNLTVMYKNGDDGVASDYKKYRQYREQTEKLAAQLQG 225 RQD L RD PRA LL + C ++ H PSCYNL VMY GDDGV +D +K ++++++T+ + ++ G Sbjct: 60 RQDDARVALKRDAPRAEQLLTKSCLKSGHAPSCYNLAVMYTQGDDGVPADPEKAKEFQKKTDDMVSKFGG 129 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig10112.237.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 12
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig10112.237.1 >prot_M-pyrifera_M_contig10112.237.1 ID=prot_M-pyrifera_M_contig10112.237.1|Name=mRNA_M-pyrifera_M_contig10112.237.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=83bp MLAKQLLRQDGKGPTLRDPPRARTLLEQGCAQNHGPSCYNLTVMYKNGDDback to top mRNA from alignment at M-pyrifera_M_contig10112:542..1237+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig10112.237.1 ID=mRNA_M-pyrifera_M_contig10112.237.1|Name=mRNA_M-pyrifera_M_contig10112.237.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=696bp|location=Sequence derived from alignment at M-pyrifera_M_contig10112:542..1237+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig10112:542..1237+ >mRNA_M-pyrifera_M_contig10112.237.1 ID=mRNA_M-pyrifera_M_contig10112.237.1|Name=mRNA_M-pyrifera_M_contig10112.237.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=498bp|location=Sequence derived from alignment at M-pyrifera_M_contig10112:542..1237+ (Macrocystis pyrifera P11B4 male)back to top |