prot_M-pyrifera_M_contig111354.2367.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig111354.2367.1
Unique Nameprot_M-pyrifera_M_contig111354.2367.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length137
Homology
BLAST of mRNA_M-pyrifera_M_contig111354.2367.1 vs. uniprot
Match: A0A0T5YSM4_9GAMM (AsmA family/AsmA-like C-terminal region n=1 Tax=endosymbiont of Ridgeia piscesae TaxID=54398 RepID=A0A0T5YSM4_9GAMM)

HSP 1 Score: 53.5 bits (127), Expect = 1.450e-5
Identity = 35/100 (35.00%), Postives = 53/100 (53.00%), Query Frame = 0
Query:   10 PLNCAALRLDLVRGRTAATAGPVIVARSDKLELIGRGTLDLGREQIALKLQPAPQTGLALGAPGNPRTVSISGSLRAPVMKSKAGDLLHESLSIGTSLAT 109
            P+NC  +  D+V+G+  A A   IV  +  L LIG G +DLGREQ+ L+L P  +    +     P  +S+ G+L  P +  K    L  + +  T+LAT
Sbjct:  576 PINCGVVHFDIVKGQADARA---IVFDTGALSLIGTGKIDLGREQLDLRLDPRAKNVSVMKLTLVP--LSVGGTLAHPTITPKVAGTLKTTATTLTALAT 670          
BLAST of mRNA_M-pyrifera_M_contig111354.2367.1 vs. uniprot
Match: A0A0T5ZCR7_9GAMM (Uncharacterized protein involved in outer membrane biogenesis n=5 Tax=sulfur-oxidizing symbionts TaxID=32036 RepID=A0A0T5ZCR7_9GAMM)

HSP 1 Score: 53.5 bits (127), Expect = 1.500e-5
Identity = 35/100 (35.00%), Postives = 53/100 (53.00%), Query Frame = 0
Query:   10 PLNCAALRLDLVRGRTAATAGPVIVARSDKLELIGRGTLDLGREQIALKLQPAPQTGLALGAPGNPRTVSISGSLRAPVMKSKAGDLLHESLSIGTSLAT 109
            P+NC  +  D+V+G+  A A   IV  +  L LIG G +DLGREQ+ L+L P  +    +     P  +S+ G+L  P +  K    L  + +  T+LAT
Sbjct:  858 PINCGVVHFDIVKGQADARA---IVFDTGALSLIGTGKIDLGREQLDLRLDPRAKNVSVMKLTLVP--LSVGGTLAHPTITPKVAGTLKTTATTLTALAT 952          
BLAST of mRNA_M-pyrifera_M_contig111354.2367.1 vs. uniprot
Match: UPI0019645E9E (AsmA family protein n=1 Tax=Desulfobulbus rhabdoformis TaxID=34032 RepID=UPI0019645E9E)

HSP 1 Score: 52.0 bits (123), Expect = 5.020e-5
Identity = 37/127 (29.13%), Postives = 66/127 (51.97%), Query Frame = 0
Query:   11 LNCAALRLDLVRGRTAATAGPVIVARSDKLELIGRGTLDLGREQIALKLQPAPQ--TGLALGAPGNPRTVSISGSLRAPVMKSKAGDLLHESLSIGTSLATNPLARAADTVFARHGTPRTSCAAMLG 135
            ++CA +R  L  G   ATA   I  R+DK+++IG GT++L  EQ+ L ++P  +   G++L +P     V + G+L  P M   A   +  ++S+G  +AT  ++   + +  +       C+  LG
Sbjct:  613 MSCAVVRFVLNDG--VATADKGIAMRTDKVDVIGSGTINLKNEQLNLGIKPRARGGVGVSLSSP-LAGLVKVKGTLANPSMGLDAAGTMKTAVSLGAGVATGGISTLGELLVDKVVADGDPCSTALG 736          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig111354.2367.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A0T5YSM4_9GAMM1.450e-535.00AsmA family/AsmA-like C-terminal region n=1 Tax=en... [more]
A0A0T5ZCR7_9GAMM1.500e-535.00Uncharacterized protein involved in outer membrane... [more]
UPI0019645E9E5.020e-529.13AsmA family protein n=1 Tax=Desulfobulbus rhabdofo... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig111354contigM-pyrifera_M_contig111354:9..419 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig111354.2367.1mRNA_M-pyrifera_M_contig111354.2367.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig111354 9..419 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig111354.2367.1 ID=prot_M-pyrifera_M_contig111354.2367.1|Name=mRNA_M-pyrifera_M_contig111354.2367.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=137bp
PLQHPAPQAPLNCAALRLDLVRGRTAATAGPVIVARSDKLELIGRGTLDL
GREQIALKLQPAPQTGLALGAPGNPRTVSISGSLRAPVMKSKAGDLLHES
LSIGTSLATNPLARAADTVFARHGTPRTSCAAMLGD*
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