mRNA_M-pyrifera_M_contig101051.230.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig101051.230.1 vs. uniprot
Match: A0A482V3N3_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482V3N3_9ARCH) HSP 1 Score: 62.4 bits (150), Expect = 1.370e-10 Identity = 28/49 (57.14%), Postives = 36/49 (73.47%), Query Frame = 1 Query: 34 TARVYSTATGMCESILVGHEGEVSNLTFNCRGTRLLTASSDHTARIWDV 180 TA Y +G C +IL GHEGE+S + FN +G+R+LTASSD TARIW+ Sbjct: 24 TAYTYPYVSGACHAILTGHEGEISKVAFNPQGSRVLTASSDKTARIWET 72
BLAST of mRNA_M-pyrifera_M_contig101051.230.1 vs. uniprot
Match: UPI001494AE7D (dynein assembly factor with WDR repeat domains 1-like n=1 Tax=Ailuropoda melanoleuca TaxID=9646 RepID=UPI001494AE7D) HSP 1 Score: 54.7 bits (130), Expect = 1.890e-7 Identity = 26/44 (59.09%), Postives = 33/44 (75.00%), Query Frame = 1 Query: 31 GTARVYSTATGMCESILVGHEGEVSNLTFNCRGTRLLTASSDHT 162 GTARV+S AT C + L GHEGE+S ++FN +G RLLT S+D T Sbjct: 12 GTARVFSAATRKCITTLEGHEGEISKISFNPQGNRLLTGSADKT 55
BLAST of mRNA_M-pyrifera_M_contig101051.230.1 vs. uniprot
Match: UPI0019E340C4 (Uncharacterized protein n=1 Tax=filamentous cyanobacterium LEGE 11480 TaxID=2777977 RepID=UPI0019E340C4) HSP 1 Score: 56.6 bits (135), Expect = 4.340e-7 Identity = 27/51 (52.94%), Postives = 36/51 (70.59%), Query Frame = 1 Query: 28 DGTARVYSTATGMCESILVGHEGEVSNLTFNCRGTRLLTASSDHTARIWDV 180 D TAR++ +TG L GH+G V+N F+ G R+LTASSD+TAR+WDV Sbjct: 2 DNTARLWDASTGQMLQELKGHQGWVNNAVFSQDGRRILTASSDNTARLWDV 52
BLAST of mRNA_M-pyrifera_M_contig101051.230.1 vs. uniprot
Match: UPI000DC18D29 (dynein assembly factor with WDR repeat domains 1 n=1 Tax=Theropithecus gelada TaxID=9565 RepID=UPI000DC18D29) HSP 1 Score: 54.7 bits (130), Expect = 1.400e-6 Identity = 26/44 (59.09%), Postives = 33/44 (75.00%), Query Frame = 1 Query: 31 GTARVYSTATGMCESILVGHEGEVSNLTFNCRGTRLLTASSDHT 162 GTAR++S AT C + L GHEGE+S ++FN +G RLLT SSD T Sbjct: 149 GTARIFSAATRKCIAKLEGHEGEISKISFNPQGNRLLTGSSDKT 192
BLAST of mRNA_M-pyrifera_M_contig101051.230.1 vs. uniprot
Match: A0A6V7H851_9HYME (Hypothetical protein (Fragment) n=1 Tax=Heterotrigona itama TaxID=395501 RepID=A0A6V7H851_9HYME) HSP 1 Score: 53.1 bits (126), Expect = 1.480e-6 Identity = 26/52 (50.00%), Postives = 35/52 (67.31%), Query Frame = 1 Query: 28 DGTARVYSTATGMCESILVGHEGEVSNLTFNCRGTRLLTASSDHTARIWDVS 183 D TA+V+ T C + L H+ EV +LTFN G +L +ASSD TAR+WDV+ Sbjct: 2 DKTAKVWETRMNSCLATLREHDDEVLDLTFNNNGKKLASASSDTTARVWDVT 53
BLAST of mRNA_M-pyrifera_M_contig101051.230.1 vs. uniprot
Match: UPI00077F8E89 (WD repeat-containing protein 37 n=1 Tax=Parasteatoda tepidariorum TaxID=114398 RepID=UPI00077F8E89) HSP 1 Score: 53.9 bits (128), Expect = 3.960e-6 Identity = 27/68 (39.71%), Postives = 41/68 (60.29%), Query Frame = 1 Query: 7 QLATASADGTARVYSTATGMCESILVGHEGEVSNLTFNCRGTRLLTASSDHTARIWDVSESGSGTPLQ 210 Q+ATASAD TAR++ G C GH+G V+++ F+ +++AS D TA +W VS S T ++ Sbjct: 139 QIATASADHTARIWDIHNGKCIVQYWGHKGSVNSVRFHPNQDLVVSASGDQTAHVWSVSSSSGNTDMK 206
BLAST of mRNA_M-pyrifera_M_contig101051.230.1 vs. uniprot
Match: A0A7S3NJX1_9STRA (Hypothetical protein n=2 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NJX1_9STRA) HSP 1 Score: 52.0 bits (123), Expect = 1.090e-5 Identity = 28/68 (41.18%), Postives = 44/68 (64.71%), Query Frame = 1 Query: 7 QLATASADGTARVYSTATGMCESILVGHEGEVSNLTFNCRGTRLLTASSDHTARIWDVSESGSGTPLQ 210 QLAT + D R+++T T C LVGHE V ++ ++ G L++AS+DHT R+W+V+ +GT L+ Sbjct: 23 QLATGTDDNKVRIWNTDTSECRE-LVGHEDSVISIAYSQDGITLVSASADHTCRLWNVA---NGTELR 86
BLAST of mRNA_M-pyrifera_M_contig101051.230.1 vs. uniprot
Match: A0A1C7MBJ2_GRIFR (Ribosome assembly protein 4 n=1 Tax=Grifola frondosa TaxID=5627 RepID=A0A1C7MBJ2_GRIFR) HSP 1 Score: 52.4 bits (124), Expect = 1.410e-5 Identity = 32/74 (43.24%), Postives = 42/74 (56.76%), Query Frame = 1 Query: 7 QLATASADGTARVYSTATGMCESILVGHEGEVSNLTFNCRGTR----LLTASSDHTARIWDVSESGSGTPLQTL 216 +LA++S DGT RV+ST T +CE L GH V+ + + G L TASSD T R+WD + G PL L Sbjct: 281 RLASSSKDGTVRVWSTLTRLCEYTLGGHTASVNVVRWGGGGLNGKGVLYTASSDRTVRVWDAN---GGKPLHVL 351
BLAST of mRNA_M-pyrifera_M_contig101051.230.1 vs. uniprot
Match: A0A168F6A7_9HYPO (Nuclear distribution protein PAC1 n=1 Tax=Moelleriella libera RCEF 2490 TaxID=1081109 RepID=A0A168F6A7_9HYPO) HSP 1 Score: 52.0 bits (123), Expect = 1.880e-5 Identity = 26/58 (44.83%), Postives = 37/58 (63.79%), Query Frame = 1 Query: 10 LATASADGTARVYSTATGMCESILVGHEGEVSNLTFNCRGTRLLTASSDHTARIWDVS 183 L +ASAD + R++ T TG C L GH V ++ + G +L+A SDHTAR+WD+S Sbjct: 228 LISASADKSLRIWDTTTGYCLKALRGHTDWVRDVCPSLDGQYILSAGSDHTARLWDIS 285
BLAST of mRNA_M-pyrifera_M_contig101051.230.1 vs. uniprot
Match: D8LUW1_BLAHO (Utp12 domain-containing protein n=1 Tax=Blastocystis hominis TaxID=12968 RepID=D8LUW1_BLAHO) HSP 1 Score: 52.0 bits (123), Expect = 2.000e-5 Identity = 25/50 (50.00%), Postives = 31/50 (62.00%), Query Frame = 1 Query: 43 VYSTATGMCESILVGHEGEVSNLTFNCRGTRLLTASSDHTARIWDVSESG 192 ++S TG L GHEG +S L FN RGT+L + S DHT R WD+ SG Sbjct: 564 IWSLRTGKLLDTLTGHEGPISCLRFNGRGTQLASGSWDHTVRTWDLLGSG 613 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig101051.230.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 15
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig101051.230.1 >prot_M-pyrifera_M_contig101051.230.1 ID=prot_M-pyrifera_M_contig101051.230.1|Name=mRNA_M-pyrifera_M_contig101051.230.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=107bp CLQLATASADGTARVYSTATGMCESILVGHEGEVSNLTFNCRGTRLLTASback to top mRNA from alignment at M-pyrifera_M_contig101051:135..562- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig101051.230.1 ID=mRNA_M-pyrifera_M_contig101051.230.1|Name=mRNA_M-pyrifera_M_contig101051.230.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=428bp|location=Sequence derived from alignment at M-pyrifera_M_contig101051:135..562- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig101051:135..562- >mRNA_M-pyrifera_M_contig101051.230.1 ID=mRNA_M-pyrifera_M_contig101051.230.1|Name=mRNA_M-pyrifera_M_contig101051.230.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=642bp|location=Sequence derived from alignment at M-pyrifera_M_contig101051:135..562- (Macrocystis pyrifera P11B4 male)back to top |