mRNA_M-pyrifera_M_contig99986.22993.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig99986.22993.1 vs. uniprot
Match: A0A2W4KY61_9PROT (2-dehydro-3-deoxy-6-phosphogalactonate aldolase n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A2W4KY61_9PROT) HSP 1 Score: 67.8 bits (164), Expect = 2.640e-12 Identity = 33/62 (53.23%), Postives = 47/62 (75.81%), Query Frame = 1 Query: 1 LRAVLPTNIRLIPVGGVGAENAAQWMSAGAAALGVGSALFKPEWSSEEVEEAARALYMAMHS 186 LRAVLP ++RL+PVGG+GA+N A +++AGAA G+GS L+KP S+++ +E AR L A S Sbjct: 145 LRAVLPASVRLLPVGGIGAQNMAAYLAAGAAGFGIGSTLYKPGKSADQTQEDARKLMEAWRS 206
BLAST of mRNA_M-pyrifera_M_contig99986.22993.1 vs. uniprot
Match: A0A4S1XHI3_9SPHN (2-dehydro-3-deoxy-6-phosphogalactonate aldolase n=1 Tax=Sphingomonas gei TaxID=1395960 RepID=A0A4S1XHI3_9SPHN) HSP 1 Score: 65.1 bits (157), Expect = 2.810e-11 Identity = 33/60 (55.00%), Postives = 43/60 (71.67%), Query Frame = 1 Query: 1 LRAVLPTNIRLIPVGGVGAENAAQWMSAGAAALGVGSALFKPEWSSEEVEEAARALYMAM 180 +RAVLP ++RL+PVGGV +N A W AGAA G+GSAL+KP ++ EV E ARA A+ Sbjct: 148 MRAVLPKDLRLLPVGGVAPDNMAPWREAGAAGFGLGSALYKPGLTAAEVGERARAFVSAL 207
BLAST of mRNA_M-pyrifera_M_contig99986.22993.1 vs. uniprot
Match: UPI001B002F32 (2-dehydro-3-deoxy-6-phosphogalactonate aldolase n=1 Tax=Novosphingobium sp. TaxID=1874826 RepID=UPI001B002F32) HSP 1 Score: 63.5 bits (153), Expect = 1.080e-10 Identity = 31/60 (51.67%), Postives = 43/60 (71.67%), Query Frame = 1 Query: 1 LRAVLPTNIRLIPVGGVGAENAAQWMSAGAAALGVGSALFKPEWSSEEVEEAARALYMAM 180 +RAVLP ++RL+PVGGV +N A W++AGAA G+GSAL+KP ++EV AR A+ Sbjct: 148 MRAVLPRDLRLLPVGGVSPDNMAPWLAAGAAGFGLGSALYKPGMGADEVGANARGFVAAL 207
BLAST of mRNA_M-pyrifera_M_contig99986.22993.1 vs. uniprot
Match: A0A2S5JH24_9RHOB (2-keto-3-deoxy-phosphogalactonate aldolase n=1 Tax=Albidovulum inexpectatum TaxID=196587 RepID=A0A2S5JH24_9RHOB) HSP 1 Score: 62.8 bits (151), Expect = 1.900e-10 Identity = 33/59 (55.93%), Postives = 41/59 (69.49%), Query Frame = 1 Query: 1 LRAVLPTNIRLIPVGGVGAENAAQWMSAGAAALGVGSALFKPEWSSEEVEEAARALYMA 177 +RAVLP R+ VGGVGA+N AQW +AGA G+GSAL+KP + E+V E AR L A Sbjct: 137 MRAVLPEGARVYAVGGVGADNFAQWRAAGADGFGIGSALYKPGLTVEQVAERARELVQA 195
BLAST of mRNA_M-pyrifera_M_contig99986.22993.1 vs. uniprot
Match: A0A2T6F055_9BURK (2-dehydro-3-deoxy-6-phosphogalactonate aldolase n=1 Tax=Glaciimonas sp. PCH181 TaxID=2133943 RepID=A0A2T6F055_9BURK) HSP 1 Score: 62.8 bits (151), Expect = 2.030e-10 Identity = 32/58 (55.17%), Postives = 43/58 (74.14%), Query Frame = 1 Query: 4 RAVLPTNIRLIPVGGVGAENAAQWMSAGAAALGVGSALFKPEWSSEEVEEAARALYMA 177 RAV+PTNI L+PVGG+ EN A +M+AGA+ G+GSAL+KP S+EEV + A+ A Sbjct: 144 RAVIPTNIALVPVGGITPENMATFMAAGASGFGLGSALYKPGMSAEEVSKNAQQFVAA 201
BLAST of mRNA_M-pyrifera_M_contig99986.22993.1 vs. uniprot
Match: A0A841HNY3_9GAMM (2-dehydro-3-deoxyphosphogalactonate aldolase n=1 Tax=Povalibacter uvarum TaxID=732238 RepID=A0A841HNY3_9GAMM) HSP 1 Score: 62.0 bits (149), Expect = 4.250e-10 Identity = 28/56 (50.00%), Postives = 42/56 (75.00%), Query Frame = 1 Query: 1 LRAVLPTNIRLIPVGGVGAENAAQWMSAGAAALGVGSALFKPEWSSEEVEEAARAL 168 L VLP ++R+ PVGGVGA++ A+W+ AGAA G GS LF+P +S++E+ + AR + Sbjct: 144 LNDVLPKHVRVYPVGGVGADDIAEWLQAGAAGFGFGSELFRPTYSTQEISQRARRV 199
BLAST of mRNA_M-pyrifera_M_contig99986.22993.1 vs. uniprot
Match: S9QTE6_9RHOB (2-keto-3-deoxy-phosphogalactonate aldolase n=1 Tax=Rubellimicrobium thermophilum DSM 16684 TaxID=1123069 RepID=S9QTE6_9RHOB) HSP 1 Score: 61.6 bits (148), Expect = 5.430e-10 Identity = 31/59 (52.54%), Postives = 42/59 (71.19%), Query Frame = 1 Query: 1 LRAVLPTNIRLIPVGGVGAENAAQWMSAGAAALGVGSALFKPEWSSEEVEEAARALYMA 177 +RAVLP+ R+ VGG G EN A W++AGA G+GSAL++P ++E+V E ARAL A Sbjct: 137 MRAVLPSGTRVYAVGGAGPENFAAWLAAGADGFGIGSALYRPGMTAEQVGERARALVAA 195
BLAST of mRNA_M-pyrifera_M_contig99986.22993.1 vs. uniprot
Match: UPI001B16B97D (2-dehydro-3-deoxy-6-phosphogalactonate aldolase n=1 Tax=Sphingomonas sp. TaxID=28214 RepID=UPI001B16B97D) HSP 1 Score: 61.6 bits (148), Expect = 5.720e-10 Identity = 29/60 (48.33%), Postives = 43/60 (71.67%), Query Frame = 1 Query: 1 LRAVLPTNIRLIPVGGVGAENAAQWMSAGAAALGVGSALFKPEWSSEEVEEAARALYMAM 180 +RAVLP ++RL+PVGG+ +N W AGAA G+GSAL+KP +++++V ARA A+ Sbjct: 148 MRAVLPKDMRLLPVGGIAPDNMDPWREAGAAGFGLGSALYKPGFTADDVRPRARAFVAAL 207
BLAST of mRNA_M-pyrifera_M_contig99986.22993.1 vs. uniprot
Match: A0A845A7E5_9SPHN (2-dehydro-3-deoxy-6-phosphogalactonate aldolase n=2 Tax=Altericroceibacterium indicum TaxID=374177 RepID=A0A845A7E5_9SPHN) HSP 1 Score: 61.2 bits (147), Expect = 8.310e-10 Identity = 28/60 (46.67%), Postives = 44/60 (73.33%), Query Frame = 1 Query: 1 LRAVLPTNIRLIPVGGVGAENAAQWMSAGAAALGVGSALFKPEWSSEEVEEAARALYMAM 180 +RAVLP ++R++PVGG+ +N W++AGAA G+GSAL+KP ++EEV A+A ++ Sbjct: 149 MRAVLPKDLRILPVGGITPDNCGPWLAAGAAGFGLGSALYKPGMTAEEVRGHAQAFQKSL 208
BLAST of mRNA_M-pyrifera_M_contig99986.22993.1 vs. uniprot
Match: A0A8J3DRR4_9HYPH (2-dehydro-3-deoxy-6-phosphogalactonate aldolase n=1 Tax=Corticibacterium populi TaxID=1607949 RepID=A0A8J3DRR4_9HYPH) HSP 1 Score: 60.8 bits (146), Expect = 1.010e-9 Identity = 31/57 (54.39%), Postives = 43/57 (75.44%), Query Frame = 1 Query: 1 LRAVLPTNIRLIPVGGVGAENAAQWMSAGAAALGVGSALFKPEWSSEEV-EEAARAL 168 LRAVLP ++ PVGGVG ++ A W +AGA G+GS+LFKP+WS++ V EEA R++ Sbjct: 137 LRAVLPFETQIYPVGGVGPDDFAVWRAAGANGFGLGSSLFKPDWSADRVGEEAKRSV 193 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig99986.22993.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig99986.22993.1 >prot_M-pyrifera_M_contig99986.22993.1 ID=prot_M-pyrifera_M_contig99986.22993.1|Name=mRNA_M-pyrifera_M_contig99986.22993.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=64bp LRAVLPTNIRLIPVGGVGAENAAQWMSAGAAALGVGSALFKPEWSSEEVEback to top mRNA from alignment at M-pyrifera_M_contig99986:5..196+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig99986.22993.1 ID=mRNA_M-pyrifera_M_contig99986.22993.1|Name=mRNA_M-pyrifera_M_contig99986.22993.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=192bp|location=Sequence derived from alignment at M-pyrifera_M_contig99986:5..196+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig99986:5..196+ >mRNA_M-pyrifera_M_contig99986.22993.1 ID=mRNA_M-pyrifera_M_contig99986.22993.1|Name=mRNA_M-pyrifera_M_contig99986.22993.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=384bp|location=Sequence derived from alignment at M-pyrifera_M_contig99986:5..196+ (Macrocystis pyrifera P11B4 male)back to top |