mRNA_M-pyrifera_M_contig99975.22988.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig99975.22988.1 vs. uniprot
Match: G5AID6_PHYSP (Uncharacterized protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G5AID6_PHYSP) HSP 1 Score: 139 bits (351), Expect = 7.310e-36 Identity = 71/150 (47.33%), Postives = 89/150 (59.33%), Query Frame = 1 Query: 4 ALGGNCPLSCSGHGEC-RAYGRCECWGGWTGFGCQQRECQYAPAF-----GVDSSLPHQPVECAGQGICDPHTGECMCFAGFEGAACERTACPNKCSGHGICTLLSSLSNL--------PSSYSDWEMDRIVTCQCDPGFMGADCSLRQC 411 ALG +C CSGHG C RA GRC C+ G+ G C R C A+ G+D L HQP EC+ G CD TG C C +GFEG ACER +CPN CSG+G C + + L ++Y+ W+ D+I+ CQCDPGF G DCS+R C Sbjct: 24 ALGFSCDGGCSGHGACQRATGRCTCFPGFGGATCASRLCPMGAAWVDRAWGID--LAHQPAECSAMGRCDRTTGTCTCESGFEGLACERLSCPNACSGNGRCVSMRDAATLRDDRQFFVSTTYTLWDADKIMGCQCDPGFTGMDCSMRMC 171
BLAST of mRNA_M-pyrifera_M_contig99975.22988.1 vs. uniprot
Match: A0A2P4XFN2_9STRA (Uncharacterized protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XFN2_9STRA) HSP 1 Score: 139 bits (349), Expect = 1.370e-35 Identity = 71/149 (47.65%), Postives = 88/149 (59.06%), Query Frame = 1 Query: 4 ALGGNCPLSCSGHGEC-RAYGRCECWGGWTGFGCQQRECQYAPAFGVD----SSLPHQPVECAGQGICDPHTGECMCFAGFEGAACERTACPNKCSGHGICTLLSSLSNLP--------SSYSDWEMDRIVTCQCDPGFMGADCSLRQC 411 ALG +C CSGHG C R GRC C+ G+ G C R C A A+ VD + + HQP EC+ G CD TG C C GFEG ACER +CPN CSG+G C + + L ++Y+ W+ D+I+ CQCDPGF G DCSLR C Sbjct: 21 ALGFSCDGGCSGHGACQRLTGRCTCFPGFGGATCASRLCPMAAAW-VDRAWTTDMAHQPAECSAMGRCDRSTGTCTCETGFEGVACERLSCPNACSGNGRCVSMRDAATLQDDRHFYVKTTYTLWDADKIMGCQCDPGFTGMDCSLRTC 168
BLAST of mRNA_M-pyrifera_M_contig99975.22988.1 vs. uniprot
Match: A0A0W8D933_PHYNI (EGF-like domain-containing protein n=10 Tax=Phytophthora TaxID=4783 RepID=A0A0W8D933_PHYNI) HSP 1 Score: 134 bits (338), Expect = 2.860e-34 Identity = 69/151 (45.70%), Postives = 88/151 (58.28%), Query Frame = 1 Query: 1 SALGGNCPLSCSGHGEC-RAYGRCECWGGWTGFGCQQRECQYAPAF-----GVDSSLPHQPVECAGQGICDPHTGECMCFAGFEGAACERTACPNKCSGHGICTLLSSLSNLP--------SSYSDWEMDRIVTCQCDPGFMGADCSLRQC 411 SA G +C CSGHG C R+ GRC C+ G+ G C R C A+ VD + HQP EC+ G CD TG C C +GFEG ACER +CPN CSG+G C + + + ++YS W+ D+I+ CQCDPGF G DCS R+C Sbjct: 17 SAFGFSCDGGCSGHGACQRSTGRCTCFPGYGGATCASRLCPTGAAWVDRAWAVDKA--HQPAECSAMGRCDRSTGTCTCESGFEGVACERLSCPNLCSGNGRCISMRDAATIQDDRNFFVSTTYSLWDADKIMGCQCDPGFTGFDCSQREC 165
BLAST of mRNA_M-pyrifera_M_contig99975.22988.1 vs. uniprot
Match: D0NQ83_PHYIT (Uncharacterized protein n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0NQ83_PHYIT) HSP 1 Score: 135 bits (339), Expect = 3.230e-34 Identity = 70/149 (46.98%), Postives = 89/149 (59.73%), Query Frame = 1 Query: 4 ALGGNCPLSCSGHGEC-RAYGRCECWGGWTGFGCQQRECQYAPAFGVDSSLP----HQPVECAGQGICDPHTGECMCFAGFEGAACERTACPNKCSGHGICTLLSSLSNLP--------SSYSDWEMDRIVTCQCDPGFMGADCSLRQC 411 ALG +C CSGHG C R+ GRC C+ G+ G C + C A+ VD + HQPVEC+ G CD TG C C +GFEG ACER +CPN CSG+G C + + L ++YS W+ D+I+ CQCDPGF G DCS R+C Sbjct: 17 ALGFSCDGGCSGHGACQRSTGRCSCFPGYGGATCVSKLCPTGAAW-VDRAWTTDNAHQPVECSAMGRCDRPTGICACESGFEGVACERLSCPNACSGNGRCISMRDAATLQDDRNFLVSTTYSLWDADKIMGCQCDPGFSGFDCSQREC 164
BLAST of mRNA_M-pyrifera_M_contig99975.22988.1 vs. uniprot
Match: Q9Y0F6_THAWE (Sexually induced protein 3 n=1 Tax=Thalassiosira weissflogii TaxID=1577725 RepID=Q9Y0F6_THAWE) HSP 1 Score: 125 bits (315), Expect = 1.590e-33 Identity = 58/143 (40.56%), Postives = 82/143 (57.34%), Query Frame = 1 Query: 19 CPLSCSGHGECRAYGRCECW------GGWTGFGCQQRECQYAPAFGVDSSLP----HQPVECAGQGICDPHTGECMCFAGFEGAACERTACPNKCSGHGICTLLSSLSNLPSSYSD--WEMDRIVTCQCDPGFMGADCSLRQC 411 CP +CSGHG C +C C+ WTG C R C A+ + ++ H +EC+ +G+CD TGEC+CF ++G ACERT CPN CSG GIC SL+ L + D W+ ++ + C+CD G+ G DCS ++C Sbjct: 19 CPNACSGHGSCGINDKCTCYLRPNGDPAWTGHDCSMRTCPKGNAWVAEEAVSLDDVHPRMECSNKGMCDRETGECVCFENYDGKACERTICPNDCSGRGICLPQKSLAALEGATYDTPWDAEKHLGCKCDAGYRGPDCSQKEC 161
BLAST of mRNA_M-pyrifera_M_contig99975.22988.1 vs. uniprot
Match: A0A8J5IJG9_9STRA (EGF_2 domain-containing protein n=1 Tax=Phytophthora aleatoria TaxID=2496075 RepID=A0A8J5IJG9_9STRA) HSP 1 Score: 131 bits (330), Expect = 5.230e-33 Identity = 68/149 (45.64%), Postives = 87/149 (58.39%), Query Frame = 1 Query: 7 LGGNCPLSCSGHGEC-RAYGRCECWGGWTGFGCQQRECQYAPAF-----GVDSSLPHQPVECAGQGICDPHTGECMCFAGFEGAACERTACPNKCSGHGICTLLSSLSNLP--------SSYSDWEMDRIVTCQCDPGFMGADCSLRQC 411 LG +C CSGHG C R+ GRC C+ G+ G C R C A+ VD + HQP +C+ G CD TG C C +GFEG ACER +CPN CSG+G C + + L ++YS W+ D+I+ CQCDPGF G DCS R+C Sbjct: 21 LGFSCDGGCSGHGACQRSTGRCTCFPGFGGATCASRLCPTGAAWVDRAWAVDKA--HQPSQCSAMGRCDRSTGACTCESGFEGVACERLSCPNLCSGNGRCISMRDAATLQDDRNFFVSTTYSLWDADKIMGCQCDPGFTGFDCSQREC 167
BLAST of mRNA_M-pyrifera_M_contig99975.22988.1 vs. uniprot
Match: A0A7R9WEC2_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9WEC2_9STRA) HSP 1 Score: 123 bits (308), Expect = 2.830e-32 Identity = 65/164 (39.63%), Postives = 83/164 (50.61%), Query Frame = 1 Query: 1 SALGGNCPLSCSGHGECRAYGRCECW--------------GGWTGFGCQQRECQYAPAFGVD----SSLPHQPVECAGQGICDPHTGECMCFAGFEGAACERTACPNKCSGHGICTLLSSL--------SNLPSSYSD-WEMDRIVTCQCDPGFMGADCSLRQC 411 S +CP +CSGHG C + RC C+ W G C R C YA A+ VD +++ H EC+ G CD TG C CF G+EG AC+RT CPNKCSGHG C S+ YS W+ +I C+C+ GF G DCSL++C Sbjct: 16 SMASASCPNACSGHGRCSEFDRCTCFTRKDGTVDSEGNTVAAWQGPDCSLRTCPYAKAW-VDVPFANNVAHLSAECSNAGTCDRKTGLCQCFPGYEGRACDRTVCPNKCSGHGTCQSQKQFFVDHADEASDASIVYSTAWDAKKIYGCKCELGFRGPDCSLKEC 178
BLAST of mRNA_M-pyrifera_M_contig99975.22988.1 vs. uniprot
Match: A0A7S3GPS4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GPS4_9STRA) HSP 1 Score: 128 bits (322), Expect = 7.980e-32 Identity = 64/153 (41.83%), Postives = 80/153 (52.29%), Query Frame = 1 Query: 19 CPLSCSGHGECRAYGRCECWGGWTGFG--CQQRECQYAPAFGVDSS----LPHQPVECAGQGICDPHTGECMCFAGFEGAACERTACPNKCSGHGICTLLSSLS----------------NLPSSYSDWEMDRIVTCQCDPGFMGADCSLRQC 411 CP C+GHG C C C+ W G C R C + A+ VD + + HQ EC+ G CD TG C CFAGF G AC+R+ACP CSGHGIC+ + +S SYS+W+ + I C+CD GF GADCSL C Sbjct: 21 CPNGCNGHGSCSTSNVCTCYPQWDGGAADCSARVCPFGTAW-VDKAYAADVAHQSAECSNAGFCDRETGNCKCFAGFTGNACQRSACPADCSGHGICSTIGDVSLYEGPDYDPSIIFAGDGFGPSYSNWDKNSIQLCKCDQGFFGADCSLAMC 172
BLAST of mRNA_M-pyrifera_M_contig99975.22988.1 vs. uniprot
Match: A0A7S0T0J1_9STRA (Hypothetical protein n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0T0J1_9STRA) HSP 1 Score: 128 bits (322), Expect = 8.500e-32 Identity = 64/152 (42.11%), Postives = 78/152 (51.32%), Query Frame = 1 Query: 19 CPLSCSGHGECRAYGRCECWGGWTGFG--CQQRECQYAPAFG---VDSSLPHQPVECAGQGICDPHTGECMCFAGFEGAACERTACPNKCSGHGICTLLSSLSNLP----------------SSYSDWEMDRIVTCQCDPGFMGADCSLRQC 411 CP SCSGHG C C+C+ GW G C R+C A+ + HQ EC+ GICD TG C CF GF G+AC+R+ CPN CSGHG C ++ +S SSYS W+ I C CD GF G DCSL+ C Sbjct: 32 CPNSCSGHGTCAGGNICQCFTGWNGGAADCSFRQCANGTAWADKAYATDEAHQTTECSNAGICDRSTGLCKCFDGFTGSACQRSVCPNDCSGHGSCLTINDISVFEGPPYDPTSVYKGTGRGSSYSYWDKSSITMCNCDDGFFGPDCSLKMC 183
BLAST of mRNA_M-pyrifera_M_contig99975.22988.1 vs. uniprot
Match: A0A7S3LYS2_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3LYS2_9STRA) HSP 1 Score: 128 bits (322), Expect = 8.760e-32 Identity = 64/153 (41.83%), Postives = 80/153 (52.29%), Query Frame = 1 Query: 19 CPLSCSGHGECRAYGRCECWGGWTGFG--CQQRECQYAPAFGVDSS----LPHQPVECAGQGICDPHTGECMCFAGFEGAACERTACPNKCSGHGICTLLSSLS----------------NLPSSYSDWEMDRIVTCQCDPGFMGADCSLRQC 411 CP C+GHG C C C+ W G C R C + A+ VD + + HQ EC+ G CD TG C CFAGF G AC+R+ACP CSGHGIC+ + +S SYS+W+ + I C+CD GF GADCSL C Sbjct: 21 CPNGCNGHGSCSTSNVCTCYPQWDGGAADCSARVCPFGTAW-VDKAYAADVAHQSAECSNAGFCDRETGNCKCFAGFTGNACQRSACPADCSGHGICSTIGDVSLYEGPDYDPSIIFAGDGFGPSYSNWDKNSIQLCKCDQGFFGADCSLAMC 172 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig99975.22988.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig99975.22988.1 >prot_M-pyrifera_M_contig99975.22988.1 ID=prot_M-pyrifera_M_contig99975.22988.1|Name=mRNA_M-pyrifera_M_contig99975.22988.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=137bp SALGGNCPLSCSGHGECRAYGRCECWGGWTGFGCQQRECQYAPAFGVDSSback to top mRNA from alignment at M-pyrifera_M_contig99975:27..437- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig99975.22988.1 ID=mRNA_M-pyrifera_M_contig99975.22988.1|Name=mRNA_M-pyrifera_M_contig99975.22988.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=411bp|location=Sequence derived from alignment at M-pyrifera_M_contig99975:27..437- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig99975:27..437- >mRNA_M-pyrifera_M_contig99975.22988.1 ID=mRNA_M-pyrifera_M_contig99975.22988.1|Name=mRNA_M-pyrifera_M_contig99975.22988.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=822bp|location=Sequence derived from alignment at M-pyrifera_M_contig99975:27..437- (Macrocystis pyrifera P11B4 male)back to top |