prot_M-pyrifera_M_contig99456.22879.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_M-pyrifera_M_contig99456.22879.1
Unique Name	prot_M-pyrifera_M_contig99456.22879.1
Type	polypeptide
Organism	Macrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length	208

Homology

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BLAST of mRNA_M-pyrifera_M_contig99456.22879.1 vs. uniprot
Match: A0A7M7P576_STRPU (F-box domain-containing protein n=1 Tax=Strongylocentrotus purpuratus TaxID=7668 RepID=A0A7M7P576_STRPU)

HSP 1 Score: 84.0 bits (206), Expect = 2.880e-15
Identity = 61/209 (29.19%), Postives = 115/209 (55.02%), Query Frame = 0

Query:    2 EAIAG-CHQLTHLSLAGCQSMGDDALEVIVAGXGNIQVLDLTECERLSGSAVAQILRTYRGLVSVKLNGVKKINDRSLEPLAAGDGSPALKVLEL-RYAPVTNVGIAYIAAGCPNLEELDLGW-NDKHVNDESMRIVVQGCSKLRRLNVDRCKDITDHGIEWLGTHLLHLEVLHM--SRLLCVSRLHSLAEGCPFLKHLDLSQCNMVSL 205
            EAIA  C +L  L+L+ C+S+  ++   + +   N++ L+L    +++ + + QI      + ++ L G++ ++      L      P L+ L+L R   ++ VG+ Y+AAGCPNL ELD+GW +D  VN   +R +V GC KL++L +   + I D  +  + ++L  LE L +  ++ + ++ +  + + C  L  LD+S C  ++L
Sbjct:  369 EAIATVCTKLKELNLSSCRSLTPNSYGCLHS-LKNLETLNLYRA-KITEAEMIQIFSHTPQMRNLNLGGIRFVSTLDNVILQLSQTCPRLENLDLWRAKTLSFVGLGYLAAGCPNLLELDVGWCSDLSVNTTWLRKLVSGCPKLKKLLLTSIRSIADGDLYSIASNLPDLEQLDLLGAQRVSLNGITRVLDKCTKLVFLDVSFCQQLTL 575

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BLAST of mRNA_M-pyrifera_M_contig99456.22879.1 vs. uniprot
Match: UPI001BB28A04 (F-box/LRR-repeat protein 4-like isoform X1 n=2 Tax=Lytechinus variegatus TaxID=7654 RepID=UPI001BB28A04)

HSP 1 Score: 74.3 bits (181), Expect = 6.030e-12
Identity = 64/211 (30.33%), Postives = 114/211 (54.03%), Query Frame = 0

Query:    2 EAIAG-CHQLTHLSLAGCQSMGDDALEVIVAGXGNIQVLDLTECERLSGSAVAQILRTYRGLVSVKLNGVKKIN--DRSLEPLAAGDGSPALKVLEL-RYAPVTNVGIAYIAAGCPNLEELDLGW-NDKHVNDESMRIVVQGCSKLRRLNVDRCKDITDHGIEWLGTHLLHLEVLHMSRLLCVSR--LHSLAEGCPFLKHLDLSQCNMVSL 205
            EAIA  C +L  L+L+ C+S+  ++   + +   N++ L+L    +++ + + QI      +  + L G++ I   D  ++ LA     P L+ L+L R   ++ VG+ +IAAGCPNL ELD+GW +D  VN   +R +V  C +L++L +   + I D  +  + ++L  LE L +     VS+  +  + + C  L  LD+S C  ++L
Sbjct:  367 EAIASVCTKLKELNLSSCRSLKPNSYGCLHS-LKNLERLNLYRA-KITEAEMIQIFSHTPHIRHLNLGGIRFIVTLDNVMQQLAKT--CPHLESLDLWRAKTLSFVGLGHIAAGCPNLLELDVGWCSDLSVNTTWLRKLVCNCPRLKKLFLTSIRSIADCDLHSIASNLPDLEQLDLLGAQRVSQQGITRVLDKCSKLIFLDVSFCQQLTL 573

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BLAST of mRNA_M-pyrifera_M_contig99456.22879.1 vs. uniprot
Match: A0A7S1U2X0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U2X0_9STRA)

HSP 1 Score: 72.4 bits (176), Expect = 2.950e-11
Identity = 55/183 (30.05%), Postives = 91/183 (49.73%), Query Frame = 0

Query:    2 EAIAG-CHQLTHLSLAGCQSMGDDALEVIVAGXGN-IQVLDLTECERLSGSAVAQILRTYRGLVSVKLNGV-KKINDRSLEPLAAGDGSPALKVLELRYAP-VTNVGIAYIAAGCPNLEELDLGWNDKHVNDESMRIV--VQGCSKLRRLNVDRCKDITDHGIEWLGTHLLHLEVLHMSRLLC 178
            +A+ G   ++ HL L GC  +   A+  I  G G  ++ L L+ C +L+ + +  +      L  + LNG  + I D    PL     +  L+ LEL  A  +T+ G+AY+ AGCP L++L+L      +NDE+M  +   Q    LR L++  C +I+D G+ W+   +  L  L +    C
Sbjct:  439 QALCGDLDEVQHLHLHGCFQISTTAMRAIANGLGAPLRSLSLSNCPKLTLNGMQALWEHCASLEYLSLNGCGENIVDNFFRPLVRRPAA-CLRTLELEDAECLTHTGVAYLVAGCPQLDKLNLS-GCVGLNDEAMLHLGESQFYPGLRHLHLTNCTNISDAGLSWMSDGVDSLYTLSLRGTRC 619

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BLAST of mRNA_M-pyrifera_M_contig99456.22879.1 vs. uniprot
Match: A0A210PSH5_MIZYE (F-box/LRR-repeat protein 4 n=1 Tax=Mizuhopecten yessoensis TaxID=6573 RepID=A0A210PSH5_MIZYE)

HSP 1 Score: 70.9 bits (172), Expect = 9.530e-11
Identity = 53/226 (23.45%), Postives = 102/226 (45.13%), Query Frame = 0

Query:    9 QLTHLSLAGCQSMGDDALEVIVAGXGNIQVLDLTECERLSGS------------------------AVAQILRTYRGLVSVKLNGVKKINDRSLEPLAAGDGSPALKVLEL-RYAPVTNVGIAYIAAGCPNLEELDLGW-NDKHVNDESMRIVVQGCSKLRRLNVDRCKDITDHGIEWLGTHLLHLEVLHMSRLLCVSR--LHSLAEGCPFLKHLDLSQCNMVSLS 206
            +L+ L LA C  +  D ++ I      ++ LD+  C ++ G+                        ++  +++ ++ L ++ +    +IN+     LA G     L  ++  R   +T  G+  +A GCP+LEELD+GW         S+  +VQ C+KL++L +   +++ D  +  + TH   L+ L +     V+R  +  + + CP L   D+S C  +  S
Sbjct:  433 ELSTLYLANCTFVNSDVMKCIANFCPKLKDLDIQGCSKIDGTDLLHLQKIPNLTRLNLYRSLVDTNSLVSLIKVFKNLEALNIGSCIRINNFDEVCLALGKNCKKLVSVDFWRSKTITGDGLVALAQGCPDLEELDIGWCPGLRSGSASLIQLVQTCTKLKKLFLTANRNVCDVDLMAISTHSRQLQQLDILGTREVTRDAVLRVLQNCPKLTMFDVSFCMSIDFS 658

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BLAST of mRNA_M-pyrifera_M_contig99456.22879.1 vs. uniprot
Match: UPI001AACF9F7 (F-box/LRR-repeat protein 4 n=2 Tax=Ranoidea TaxID=30352 RepID=UPI001AACF9F7)

HSP 1 Score: 70.5 bits (171), Expect = 1.260e-10
Identity = 65/223 (29.15%), Postives = 99/223 (44.39%), Query Frame = 0

Query:    9 QLTHLSLAGCQSMGDDALEVIVAGXGNIQVLDLTECERLSGSAVAQI--------LRTYR------GLVSV----------KLNGVKKINDRSLEPLAAGDGSPALKVLEL-RYAPVTNVGIAYIAAGCPNLEELDLGWNDK-HVNDESMRIVVQGCSKLRRLNVDRCKDITDHGIEWLGTHLLHLEVLHM--SRLLCVSRLHSLAEGCPFLKHLDLSQCNMV 203
            +L  L LA    + +  LEVI     N+Q L+L+ C++L   A + I        L  YR       L+S+           L     I D  L     G     L+ L+L R   +T  G+  +AAGCP LEE+DLGW    H        + +  + LR+L +   + + D  IE L  +  HL+ L +  +R++  + L  L E C  L  LD+S C+ +
Sbjct:  381 ELVRLELACGHFLNEACLEVIAEMCPNLQELNLSSCDKLPPQAFSHISKLCGLKRLVLYRTKIEQTALLSILNFCLEIQHLNLGSCVLIEDYDLIASVIGAKCKKLRSLDLWRCKNITEKGLGELAAGCPLLEEIDLGWCPMLHSGTGCFTNLARKLTGLRKLFLTANRSVCDSDIEELAANCPHLQYLDILGTRMVSPAALRKLLECCKELILLDVSFCSQI 603

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BLAST of mRNA_M-pyrifera_M_contig99456.22879.1 vs. uniprot
Match: UPI001457EF85 (F-box/LRR-repeat protein 4-like isoform X1 n=3 Tax=Pecten maximus TaxID=6579 RepID=UPI001457EF85)

HSP 1 Score: 65.9 bits (159), Expect = 4.920e-9
Identity = 52/173 (30.06%), Postives = 81/173 (46.82%), Query Frame = 0

Query:    1 FEA-IAGC-HQLTHLSLAGCQSMGDDALEVIVAGXGNIQVLDLTECERLSGSAVAQI--------LRTYRGLVSVK----------------LNGVKKINDRSLEPLAAGDGSPALKVLEL-RYAPVTNVGIAYIAAGCPNLEELDLGW-NDKHVNDESMRIVVQGCSKLRRL 145
            FEA +  C  +L+ L LA C  +  D ++ I      ++ LD+  C ++ G+ + Q+        L  YR LV V+                L    +IN+     LA G+    L  L+L R   +T  G+  +A GCP LEELD+GW  +  +   S+  +VQ C KL++L
Sbjct:  417 FEAFLRTCGRELSTLYLANCSFVNSDVMKSIANFCPKLKDLDIQSCSKIDGTDLLQLKNLPNITRLNLYRSLVDVQSLTALLEVFKNLEILNLGSCTRINNFDEVCLALGENCKKLISLDLWRSRTITGDGLVSLANGCPELEELDIGWCPELRLCSTSLVQLVQKCPKLKKL 589

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BLAST of mRNA_M-pyrifera_M_contig99456.22879.1 vs. uniprot
Match: A0A3L6VRT1_9STRA (Uncharacterized protein (Fragment) n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3L6VRT1_9STRA)

HSP 1 Score: 62.4 bits (150), Expect = 3.960e-8
Identity = 63/221 (28.51%), Postives = 99/221 (44.80%), Query Frame = 0

Query:    4 IAGCHQLTHLSLAGCQSMGDDALEVI---------------VAGXGNIQVLDLTECERLSGS---AVAQILRTYRGLVSVKLNGVKKINDRSLEPLAAGDGSPALKVLEL-RYAPVTNVGIAYIAAGCPNLEELDLGWNDKHVNDESMRIVVQGCSKLRRLNVDRCKDITDHGIEWLGTHLL-HLEVLHMSRLLCVSRLHSLAEGCPF-LKHLDLSQCNMV 203
            + GC++L+   +   Q+     LE                 + G  ++  L L EC +L       + Q++ T   L  + L  + K  DR LE L A      ++ L + R A +T+VG+      CP L  LD+  +   + D+++  V      L+R+N+ RC +ITD GIE L      HLE L +S    +  +  LA  C   LKHLD+S C  +
Sbjct:   11 LDGCYRLSDRGIQYLQAKCSPTLETFELSSNQRITATSISYIQGWTHLHTLSLAECPQLVDQDFVPLKQLVTT--SLRKLSLVQLDKATDRLLELLFADATDTLVEELSVARCARLTDVGVQVALQACPRLISLDVA-DVLLLTDDTLATVRASNLALQRVNLRRCTNITDKGIEDLVVSCAGHLERLEISS---IPSMVLLATHCATSLKHLDISFCRHI 225

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BLAST of mRNA_M-pyrifera_M_contig99456.22879.1 vs. uniprot
Match: W4FWE4_9STRA (Uncharacterized protein n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FWE4_9STRA)

HSP 1 Score: 62.4 bits (150), Expect = 7.010e-8
Identity = 62/225 (27.56%), Postives = 96/225 (42.67%), Query Frame = 0

Query:    4 IAGCHQLTHLSLAGCQSMGDDALEVI---------------VAGXGNIQVLDLTECERLSGSAVAQILRTYRGLVSVKLNGVK-----KINDRSLEPLAAGDGSPALKVLEL-RYAPVTNVGIAYIAAGCPNLEELDLGWNDKHVNDESMRIVVQGCSKLRRLNVDRCKDITDHGIEWL----GTHLLHLEVLHMSRLLCVSRLHSLAEGCPFLKHLDLSQCNMV 203
            + GC++L+   +   Q+     LE                 + G  ++  L L EC +L    V Q     R LV+  L  +      K  DR LE L A      ++ L + R + +T+VG+      CP L  LD+  +   + D+++  V      L+R+N+ RC +ITD GIE L      HL  LE+  +  L   S +         LKHLD+S C  +
Sbjct:  258 LDGCYRLSDRGIQYLQAKCSPTLETFELSSNQRITATSISYIQGWTHLHTLSLAECPQL----VDQDFVPLRQLVTTSLRKLSLVQLDKATDRLLELLFADATDTLVEELSVARCSRLTDVGVQVALQACPRLISLDVA-DVLLLTDDTLATVRASNLTLQRVNLRRCTNITDKGIEDLVVSCAGHLERLEISSIPLLTGKSMVLLATHXXTSLKHLDISFCRHI 477

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BLAST of mRNA_M-pyrifera_M_contig99456.22879.1 vs. uniprot
Match: A0A6A2XNV8_HIBSY (F-box/LRR-repeat protein 3-like isoform X2 n=1 Tax=Hibiscus syriacus TaxID=106335 RepID=A0A6A2XNV8_HIBSY)

HSP 1 Score: 62.0 bits (149), Expect = 8.400e-8
Identity = 60/215 (27.91%), Postives = 93/215 (43.26%), Query Frame = 0

Query:   26 LEVIVAGXGNIQVLDLTECERLSGSAVAQIL-RTYRGLVSVKLNGVKKINDRSLEPLAAGDGSPALKVLEL-RYAPVTNVGIAYIAAGCPNLEELDL----GWNDKH--------------------VNDESMRIVVQGCSKLRRLNVDRCKDITDHGIEWLGTH----LLHLEVLHMSRLLCVSR--LHSLAEGCPFLKHLDLSQCNMVSLSPL 208
            L +++     +Q LDL+ C R+    V+ +L R   G  S+ L                G+ S  LK L L R   +   G+  +A  CP LE +D+    G+ D+                     + D  +  +  GCSKL +L++  C +ITD G+     H    LL LEVL +     +    L  +  GCP LK +D+S+C ++S S L
Sbjct:   60 LPILLHKYHRLQSLDLSACPRIEDEVVSLLLSRVGTGSNSMGL----------------GNWSRCLKSLVLSRATGLRFSGLEMLARACPCLESVDVSYCCGFGDREAAALSSAVGLRDLNMDKCLGLTDVGLAKIAVGCSKLEKLSLKWCMEITDLGVTNESLHSIASLLKLEVLGLMACPLIDDVGLQFIEHGCPLLKVIDVSRCKVLSSSGL 258

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BLAST of mRNA_M-pyrifera_M_contig99456.22879.1 vs. uniprot
Match: A0A1S3TXD2_VIGRR (uncharacterized protein LOC106759641 n=5 Tax=Vigna TaxID=3913 RepID=A0A1S3TXD2_VIGRR)

HSP 1 Score: 59.7 bits (143), Expect = 6.320e-7
Identity = 45/155 (29.03%), Postives = 74/155 (47.74%), Query Frame = 0

Query:    4 IAGCHQLTHLSLAGCQSMGDDALEVIVAGXGNIQVLDLTECERLSGSAVAQILRTYRGLVSVKLNGVKKINDRSLEPLAAGDGSPALKVLELRYAPVTNVGI---AYIAAGCPNLEELDLGWNDKHVNDESMRIVVQGCSKLRRLNVDRCKDITD 155
            +A    +  L L  C ++ D +++VIV     +QVLDLT   RL+  +V  +  + R L ++KL      N  S E +AA   +    + EL    +  VG      +A    NL  LDL W  +++ D ++ ++V  C  LR L +  C  +T+
Sbjct:  541 VARGQNMKELVLKDCINLTDSSIKVIVEHCPGLQVLDLTNLNRLTDLSVGYLTNSCRSLHTLKLCR----NPFSDEAIAAFVETTGGTLKELSLNNIKKVGYHTTLSLANHAKNLHSLDLSWC-RNLTDNALGLIVDSCLALRLLKLFGCTQVTE 690

The following BLAST results are available for this feature:

BLAST of mRNA_M-pyrifera_M_contig99456.22879.1 vs. uniprot

BLAST of mRNA_M-pyrifera_M_contig99456.22879.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 18


Match Name	E-value	Identity	Description
A0A7M7P576_STRPU	2.880e-15	29.19	F-box domain-containing protein n=1 Tax=Strongyloc...	[more]
UPI001BB28A04	6.030e-12	30.33	F-box/LRR-repeat protein 4-like isoform X1 n=2 Tax...	[more]
A0A7S1U2X0_9STRA	2.950e-11	30.05	Hypothetical protein (Fragment) n=1 Tax=Phaeomonas...	[more]
A0A210PSH5_MIZYE	9.530e-11	23.45	F-box/LRR-repeat protein 4 n=1 Tax=Mizuhopecten ye...	[more]
UPI001AACF9F7	1.260e-10	29.15	F-box/LRR-repeat protein 4 n=2 Tax=Ranoidea TaxID=...	[more]
UPI001457EF85	4.920e-9	30.06	F-box/LRR-repeat protein 4-like isoform X1 n=3 Tax...	[more]
A0A3L6VRT1_9STRA	3.960e-8	28.51	Uncharacterized protein (Fragment) n=2 Tax=Aphanom...	[more]
W4FWE4_9STRA	7.010e-8	27.56	Uncharacterized protein n=3 Tax=Aphanomyces astaci...	[more]
A0A6A2XNV8_HIBSY	8.400e-8	27.91	F-box/LRR-repeat protein 3-like isoform X2 n=1 Tax...	[more]
A0A1S3TXD2_VIGRR	6.320e-7	29.03	uncharacterized protein LOC106759641 n=5 Tax=Vigna...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006553	Leucine-rich repeat, cysteine-containing subtype	SMART	SM00367	LRR_CC_2	coord: 7..32 e-value: 0.11 score: 21.6 coord: 33..58 e-value: 5.2 score: 16.0 coord: 87..111 e-value: 130.0 score: 5.9 coord: 139..164 e-value: 0.028 score: 23.6 coord: 189..208 e-value: 46.0 score: 9.4 coord: 112..138 e-value: 0.065 score: 22.4
IPR001611	Leucine-rich repeat	PFAM	PF13516	LRR_6	coord: 139..159 e-value: 0.63 score: 10.3 coord: 7..29 e-value: 0.1 score: 12.7 coord: 112..124 e-value: 0.49 score: 10.6
IPR032675	Leucine-rich repeat domain superfamily	GENE3D	3.80.10.10		coord: 2..85 e-value: 1.3E-13 score: 52.6
IPR032675	Leucine-rich repeat domain superfamily	GENE3D	3.80.10.10		coord: 86..208 e-value: 6.2E-25 score: 89.8
None	No IPR available	PANTHER	PTHR13382	MITOCHONDRIAL ATP SYNTHASE COUPLING FACTOR B	coord: 9..174
None	No IPR available	SUPERFAMILY	52047	RNI-like	coord: 4..202

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
M-pyrifera_M_contig99456	contig	M-pyrifera_M_contig99456:13..636 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male	2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90	2022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_M-pyrifera_M_contig99456.22879.1	mRNA_M-pyrifera_M_contig99456.22879.1	Macrocystis pyrifera P11B4 male	mRNA	M-pyrifera_M_contig99456 13..636 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_M-pyrifera_M_contig99456.22879.1 ID=prot_M-pyrifera_M_contig99456.22879.1|Name=mRNA_M-pyrifera_M_contig99456.22879.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=208bp
FEAIAGCHQLTHLSLAGCQSMGDDALEVIVAGCGNIQVLDLTECERLSGS
AVAQILRTYRGLVSVKLNGVKKINDRSLEPLAAGDGSPALKVLELRYAPV
TNVGIAYIAAGCPNLEELDLGWNDKHVNDESMRIVVQGCSKLRRLNVDRC
KDITDHGIEWLGTHLLHLEVLHMSRLLCVSRLHSLAEGCPFLKHLDLSQC
NMVSLSPL

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR006553	Leu-rich_rpt_Cys-con_subtyp
IPR001611	Leu-rich_rpt
IPR032675	LRR_dom_sf