mRNA_M-pyrifera_M_contig99456.22879.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig99456.22879.1 vs. uniprot
Match: A0A7M7P576_STRPU (F-box domain-containing protein n=1 Tax=Strongylocentrotus purpuratus TaxID=7668 RepID=A0A7M7P576_STRPU) HSP 1 Score: 84.0 bits (206), Expect = 2.880e-15 Identity = 61/209 (29.19%), Postives = 115/209 (55.02%), Query Frame = 1 Query: 4 EAIAG-CHQLTHLSLAGCQSMGDDALEVIVAGXGNIQVLDLTECERLSGSAVAQILRTYRGLVSVKLNGVKKINDRSLEPLAAGDGSPALKVLEL-RYAPVTNVGIAYIAAGCPNLEELDLGW-NDKHVNDESMRIVVQGCSKLRRLNVDRCKDITDHGIEWLGTHLLHLEVLHM--SRLLCVSRLHSLAEGCPFLKHLDLSQCNMVSL 615 EAIA C +L L+L+ C+S+ ++ + + N++ L+L +++ + + QI + ++ L G++ ++ L P L+ L+L R ++ VG+ Y+AAGCPNL ELD+GW +D VN +R +V GC KL++L + + I D + + ++L LE L + ++ + ++ + + + C L LD+S C ++L Sbjct: 369 EAIATVCTKLKELNLSSCRSLTPNSYGCLHS-LKNLETLNLYRA-KITEAEMIQIFSHTPQMRNLNLGGIRFVSTLDNVILQLSQTCPRLENLDLWRAKTLSFVGLGYLAAGCPNLLELDVGWCSDLSVNTTWLRKLVSGCPKLKKLLLTSIRSIADGDLYSIASNLPDLEQLDLLGAQRVSLNGITRVLDKCTKLVFLDVSFCQQLTL 575
BLAST of mRNA_M-pyrifera_M_contig99456.22879.1 vs. uniprot
Match: UPI001BB28A04 (F-box/LRR-repeat protein 4-like isoform X1 n=2 Tax=Lytechinus variegatus TaxID=7654 RepID=UPI001BB28A04) HSP 1 Score: 74.3 bits (181), Expect = 6.030e-12 Identity = 64/211 (30.33%), Postives = 114/211 (54.03%), Query Frame = 1 Query: 4 EAIAG-CHQLTHLSLAGCQSMGDDALEVIVAGXGNIQVLDLTECERLSGSAVAQILRTYRGLVSVKLNGVKKIN--DRSLEPLAAGDGSPALKVLEL-RYAPVTNVGIAYIAAGCPNLEELDLGW-NDKHVNDESMRIVVQGCSKLRRLNVDRCKDITDHGIEWLGTHLLHLEVLHMSRLLCVSR--LHSLAEGCPFLKHLDLSQCNMVSL 615 EAIA C +L L+L+ C+S+ ++ + + N++ L+L +++ + + QI + + L G++ I D ++ LA P L+ L+L R ++ VG+ +IAAGCPNL ELD+GW +D VN +R +V C +L++L + + I D + + ++L LE L + VS+ + + + C L LD+S C ++L Sbjct: 367 EAIASVCTKLKELNLSSCRSLKPNSYGCLHS-LKNLERLNLYRA-KITEAEMIQIFSHTPHIRHLNLGGIRFIVTLDNVMQQLAKT--CPHLESLDLWRAKTLSFVGLGHIAAGCPNLLELDVGWCSDLSVNTTWLRKLVCNCPRLKKLFLTSIRSIADCDLHSIASNLPDLEQLDLLGAQRVSQQGITRVLDKCSKLIFLDVSFCQQLTL 573
BLAST of mRNA_M-pyrifera_M_contig99456.22879.1 vs. uniprot
Match: A0A7S1U2X0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U2X0_9STRA) HSP 1 Score: 72.4 bits (176), Expect = 2.950e-11 Identity = 55/183 (30.05%), Postives = 91/183 (49.73%), Query Frame = 1 Query: 4 EAIAG-CHQLTHLSLAGCQSMGDDALEVIVAGXGN-IQVLDLTECERLSGSAVAQILRTYRGLVSVKLNGV-KKINDRSLEPLAAGDGSPALKVLELRYAP-VTNVGIAYIAAGCPNLEELDLGWNDKHVNDESMRIV--VQGCSKLRRLNVDRCKDITDHGIEWLGTHLLHLEVLHMSRLLC 534 +A+ G ++ HL L GC + A+ I G G ++ L L+ C +L+ + + + L + LNG + I D PL + L+ LEL A +T+ G+AY+ AGCP L++L+L +NDE+M + Q LR L++ C +I+D G+ W+ + L L + C Sbjct: 439 QALCGDLDEVQHLHLHGCFQISTTAMRAIANGLGAPLRSLSLSNCPKLTLNGMQALWEHCASLEYLSLNGCGENIVDNFFRPLVRRPAA-CLRTLELEDAECLTHTGVAYLVAGCPQLDKLNLS-GCVGLNDEAMLHLGESQFYPGLRHLHLTNCTNISDAGLSWMSDGVDSLYTLSLRGTRC 619
BLAST of mRNA_M-pyrifera_M_contig99456.22879.1 vs. uniprot
Match: A0A210PSH5_MIZYE (F-box/LRR-repeat protein 4 n=1 Tax=Mizuhopecten yessoensis TaxID=6573 RepID=A0A210PSH5_MIZYE) HSP 1 Score: 70.9 bits (172), Expect = 9.530e-11 Identity = 53/226 (23.45%), Postives = 102/226 (45.13%), Query Frame = 1 Query: 25 QLTHLSLAGCQSMGDDALEVIVAGXGNIQVLDLTECERLSGS------------------------AVAQILRTYRGLVSVKLNGVKKINDRSLEPLAAGDGSPALKVLEL-RYAPVTNVGIAYIAAGCPNLEELDLGW-NDKHVNDESMRIVVQGCSKLRRLNVDRCKDITDHGIEWLGTHLLHLEVLHMSRLLCVSR--LHSLAEGCPFLKHLDLSQCNMVSLS 618 +L+ L LA C + D ++ I ++ LD+ C ++ G+ ++ +++ ++ L ++ + +IN+ LA G L ++ R +T G+ +A GCP+LEELD+GW S+ +VQ C+KL++L + +++ D + + TH L+ L + V+R + + + CP L D+S C + S Sbjct: 433 ELSTLYLANCTFVNSDVMKCIANFCPKLKDLDIQGCSKIDGTDLLHLQKIPNLTRLNLYRSLVDTNSLVSLIKVFKNLEALNIGSCIRINNFDEVCLALGKNCKKLVSVDFWRSKTITGDGLVALAQGCPDLEELDIGWCPGLRSGSASLIQLVQTCTKLKKLFLTANRNVCDVDLMAISTHSRQLQQLDILGTREVTRDAVLRVLQNCPKLTMFDVSFCMSIDFS 658
BLAST of mRNA_M-pyrifera_M_contig99456.22879.1 vs. uniprot
Match: UPI001AACF9F7 (F-box/LRR-repeat protein 4 n=2 Tax=Ranoidea TaxID=30352 RepID=UPI001AACF9F7) HSP 1 Score: 70.5 bits (171), Expect = 1.260e-10 Identity = 65/223 (29.15%), Postives = 99/223 (44.39%), Query Frame = 1 Query: 25 QLTHLSLAGCQSMGDDALEVIVAGXGNIQVLDLTECERLSGSAVAQI--------LRTYR------GLVSV----------KLNGVKKINDRSLEPLAAGDGSPALKVLEL-RYAPVTNVGIAYIAAGCPNLEELDLGWNDK-HVNDESMRIVVQGCSKLRRLNVDRCKDITDHGIEWLGTHLLHLEVLHM--SRLLCVSRLHSLAEGCPFLKHLDLSQCNMV 609 +L L LA + + LEVI N+Q L+L+ C++L A + I L YR L+S+ L I D L G L+ L+L R +T G+ +AAGCP LEE+DLGW H + + + LR+L + + + D IE L + HL+ L + +R++ + L L E C L LD+S C+ + Sbjct: 381 ELVRLELACGHFLNEACLEVIAEMCPNLQELNLSSCDKLPPQAFSHISKLCGLKRLVLYRTKIEQTALLSILNFCLEIQHLNLGSCVLIEDYDLIASVIGAKCKKLRSLDLWRCKNITEKGLGELAAGCPLLEEIDLGWCPMLHSGTGCFTNLARKLTGLRKLFLTANRSVCDSDIEELAANCPHLQYLDILGTRMVSPAALRKLLECCKELILLDVSFCSQI 603
BLAST of mRNA_M-pyrifera_M_contig99456.22879.1 vs. uniprot
Match: UPI001457EF85 (F-box/LRR-repeat protein 4-like isoform X1 n=3 Tax=Pecten maximus TaxID=6579 RepID=UPI001457EF85) HSP 1 Score: 65.9 bits (159), Expect = 4.920e-9 Identity = 52/173 (30.06%), Postives = 81/173 (46.82%), Query Frame = 1 Query: 1 FEA-IAGC-HQLTHLSLAGCQSMGDDALEVIVAGXGNIQVLDLTECERLSGSAVAQI--------LRTYRGLVSVK----------------LNGVKKINDRSLEPLAAGDGSPALKVLEL-RYAPVTNVGIAYIAAGCPNLEELDLGW-NDKHVNDESMRIVVQGCSKLRRL 435 FEA + C +L+ L LA C + D ++ I ++ LD+ C ++ G+ + Q+ L YR LV V+ L +IN+ LA G+ L L+L R +T G+ +A GCP LEELD+GW + + S+ +VQ C KL++L Sbjct: 417 FEAFLRTCGRELSTLYLANCSFVNSDVMKSIANFCPKLKDLDIQSCSKIDGTDLLQLKNLPNITRLNLYRSLVDVQSLTALLEVFKNLEILNLGSCTRINNFDEVCLALGENCKKLISLDLWRSRTITGDGLVSLANGCPELEELDIGWCPELRLCSTSLVQLVQKCPKLKKL 589
BLAST of mRNA_M-pyrifera_M_contig99456.22879.1 vs. uniprot
Match: A0A3L6VRT1_9STRA (Uncharacterized protein (Fragment) n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3L6VRT1_9STRA) HSP 1 Score: 62.4 bits (150), Expect = 3.960e-8 Identity = 63/221 (28.51%), Postives = 99/221 (44.80%), Query Frame = 1 Query: 10 IAGCHQLTHLSLAGCQSMGDDALEVI---------------VAGXGNIQVLDLTECERLSGS---AVAQILRTYRGLVSVKLNGVKKINDRSLEPLAAGDGSPALKVLEL-RYAPVTNVGIAYIAAGCPNLEELDLGWNDKHVNDESMRIVVQGCSKLRRLNVDRCKDITDHGIEWLGTHLL-HLEVLHMSRLLCVSRLHSLAEGCPF-LKHLDLSQCNMV 609 + GC++L+ + Q+ LE + G ++ L L EC +L + Q++ T L + L + K DR LE L A ++ L + R A +T+VG+ CP L LD+ + + D+++ V L+R+N+ RC +ITD GIE L HLE L +S + + LA C LKHLD+S C + Sbjct: 11 LDGCYRLSDRGIQYLQAKCSPTLETFELSSNQRITATSISYIQGWTHLHTLSLAECPQLVDQDFVPLKQLVTT--SLRKLSLVQLDKATDRLLELLFADATDTLVEELSVARCARLTDVGVQVALQACPRLISLDVA-DVLLLTDDTLATVRASNLALQRVNLRRCTNITDKGIEDLVVSCAGHLERLEISS---IPSMVLLATHCATSLKHLDISFCRHI 225
BLAST of mRNA_M-pyrifera_M_contig99456.22879.1 vs. uniprot
Match: W4FWE4_9STRA (Uncharacterized protein n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FWE4_9STRA) HSP 1 Score: 62.4 bits (150), Expect = 7.010e-8 Identity = 62/225 (27.56%), Postives = 96/225 (42.67%), Query Frame = 1 Query: 10 IAGCHQLTHLSLAGCQSMGDDALEVI---------------VAGXGNIQVLDLTECERLSGSAVAQILRTYRGLVSVKLNGVK-----KINDRSLEPLAAGDGSPALKVLEL-RYAPVTNVGIAYIAAGCPNLEELDLGWNDKHVNDESMRIVVQGCSKLRRLNVDRCKDITDHGIEWL----GTHLLHLEVLHMSRLLCVSRLHSLAEGCPFLKHLDLSQCNMV 609 + GC++L+ + Q+ LE + G ++ L L EC +L V Q R LV+ L + K DR LE L A ++ L + R + +T+VG+ CP L LD+ + + D+++ V L+R+N+ RC +ITD GIE L HL LE+ + L S + LKHLD+S C + Sbjct: 258 LDGCYRLSDRGIQYLQAKCSPTLETFELSSNQRITATSISYIQGWTHLHTLSLAECPQL----VDQDFVPLRQLVTTSLRKLSLVQLDKATDRLLELLFADATDTLVEELSVARCSRLTDVGVQVALQACPRLISLDVA-DVLLLTDDTLATVRASNLTLQRVNLRRCTNITDKGIEDLVVSCAGHLERLEISSIPLLTGKSMVLLATHXXTSLKHLDISFCRHI 477
BLAST of mRNA_M-pyrifera_M_contig99456.22879.1 vs. uniprot
Match: A0A6A2XNV8_HIBSY (F-box/LRR-repeat protein 3-like isoform X2 n=1 Tax=Hibiscus syriacus TaxID=106335 RepID=A0A6A2XNV8_HIBSY) HSP 1 Score: 62.0 bits (149), Expect = 8.400e-8 Identity = 60/215 (27.91%), Postives = 93/215 (43.26%), Query Frame = 1 Query: 76 LEVIVAGXGNIQVLDLTECERLSGSAVAQIL-RTYRGLVSVKLNGVKKINDRSLEPLAAGDGSPALKVLEL-RYAPVTNVGIAYIAAGCPNLEELDL----GWNDKH--------------------VNDESMRIVVQGCSKLRRLNVDRCKDITDHGIEWLGTH----LLHLEVLHMSRLLCVSR--LHSLAEGCPFLKHLDLSQCNMVSLSPL 624 L +++ +Q LDL+ C R+ V+ +L R G S+ L G+ S LK L L R + G+ +A CP LE +D+ G+ D+ + D + + GCSKL +L++ C +ITD G+ H LL LEVL + + L + GCP LK +D+S+C ++S S L Sbjct: 60 LPILLHKYHRLQSLDLSACPRIEDEVVSLLLSRVGTGSNSMGL----------------GNWSRCLKSLVLSRATGLRFSGLEMLARACPCLESVDVSYCCGFGDREAAALSSAVGLRDLNMDKCLGLTDVGLAKIAVGCSKLEKLSLKWCMEITDLGVTNESLHSIASLLKLEVLGLMACPLIDDVGLQFIEHGCPLLKVIDVSRCKVLSSSGL 258
BLAST of mRNA_M-pyrifera_M_contig99456.22879.1 vs. uniprot
Match: A0A1S3TXD2_VIGRR (uncharacterized protein LOC106759641 n=5 Tax=Vigna TaxID=3913 RepID=A0A1S3TXD2_VIGRR) HSP 1 Score: 59.7 bits (143), Expect = 6.320e-7 Identity = 45/155 (29.03%), Postives = 74/155 (47.74%), Query Frame = 1 Query: 10 IAGCHQLTHLSLAGCQSMGDDALEVIVAGXGNIQVLDLTECERLSGSAVAQILRTYRGLVSVKLNGVKKINDRSLEPLAAGDGSPALKVLELRYAPVTNVGI---AYIAAGCPNLEELDLGWNDKHVNDESMRIVVQGCSKLRRLNVDRCKDITD 465 +A + L L C ++ D +++VIV +QVLDLT RL+ +V + + R L ++KL N S E +AA + + EL + VG +A NL LDL W +++ D ++ ++V C LR L + C +T+ Sbjct: 541 VARGQNMKELVLKDCINLTDSSIKVIVEHCPGLQVLDLTNLNRLTDLSVGYLTNSCRSLHTLKLCR----NPFSDEAIAAFVETTGGTLKELSLNNIKKVGYHTTLSLANHAKNLHSLDLSWC-RNLTDNALGLIVDSCLALRLLKLFGCTQVTE 690 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig99456.22879.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 18
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig99456.22879.1 >prot_M-pyrifera_M_contig99456.22879.1 ID=prot_M-pyrifera_M_contig99456.22879.1|Name=mRNA_M-pyrifera_M_contig99456.22879.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=208bp FEAIAGCHQLTHLSLAGCQSMGDDALEVIVAGCGNIQVLDLTECERLSGSback to top mRNA from alignment at M-pyrifera_M_contig99456:13..636- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig99456.22879.1 ID=mRNA_M-pyrifera_M_contig99456.22879.1|Name=mRNA_M-pyrifera_M_contig99456.22879.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=624bp|location=Sequence derived from alignment at M-pyrifera_M_contig99456:13..636- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig99456:13..636- >mRNA_M-pyrifera_M_contig99456.22879.1 ID=mRNA_M-pyrifera_M_contig99456.22879.1|Name=mRNA_M-pyrifera_M_contig99456.22879.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1248bp|location=Sequence derived from alignment at M-pyrifera_M_contig99456:13..636- (Macrocystis pyrifera P11B4 male)back to top |