mRNA_M-pyrifera_M_contig97940.22559.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig97940.22559.1 vs. uniprot
Match: A0A7V3DV50_9BACT (Glycosyltransferase n=1 Tax=bacterium TaxID=1869227 RepID=A0A7V3DV50_9BACT) HSP 1 Score: 122 bits (306), Expect = 1.750e-30 Identity = 71/182 (39.01%), Postives = 93/182 (51.10%), Query Frame = 1 Query: 4 WVNSDDYLLPGALATLAAHIEQNPHERVFMSNHVRVASDGSTIARIVPNYSPWKLRHWWWAALQLWQPGLVFHRSAFETAGPLDARLHYAMDFDFFLKLQDVQRFHYLDADLVAFRVHDAQKGHANEVPFIEERIAATNAYWQNRSALRAVFYRYLLYFVE-GSLVFVEALRQYESGDAATA 546 WVNSDDYLLPGAL A + P SN + V + G I R +YS HWW + Q G F R ++ GP D L+YAMD+DF+LKL D F++LD LVA+R+H+A K ++PF E + YW R YR LL G + + Q+ESG A+A Sbjct: 91 WVNSDDYLLPGALEKFLAFVHSVPAATFVFSNCLYVDTTGREIERKRASYSRDGFFHWWRRGVGFAQTGTFFRRELWQAHGPFDVSLNYAMDYDFWLKLTDSTEFYFLDDYLVAYRLHEASKTGEGQLPFAREMVQICQRYWDARGGWAKWKYRLLLRLAAYGRQLMFSGIEQWESGRRASA 272
BLAST of mRNA_M-pyrifera_M_contig97940.22559.1 vs. uniprot
Match: A0A353GGC8_9BACT (Glyco_trans_2-like domain-containing protein n=1 Tax=Candidatus Sumerlaeota bacterium TaxID=2107588 RepID=A0A353GGC8_9BACT) HSP 1 Score: 115 bits (288), Expect = 1.320e-27 Identity = 63/185 (34.05%), Postives = 95/185 (51.35%), Query Frame = 1 Query: 1 IWVNSDDYLLPGALATLAAHIEQNPHERVFMSN--HVRVASDGSTIARIVPNYSPWKLRHWWWAALQLWQPGLVFHRSAFETAGPLDARLHYAMDFDFFLKLQDVQRFHYLDADLVAFRVHDAQKGHANEVPFIEERIAATNAYWQNRSALRAVFYRYLLYFVEGSLVFVEALRQYESGDAATAR 549 +W+NSDD+LLPGAL L A +E+ P S+ V V+ + + + + P L +WW QPG F ++ +E GP D LHY MDFDF+LK+ D +FHY+ L +R+HDA K PF E + Y + + +R+LL + + +E LR ++GD A+ Sbjct: 117 VWINSDDFLLPGALDKLRAFLEKTPDAEFIYSDCQFVNVSGRSTQVRKAFYHEDPSALYYWWRRGAGFGQPGSFFPKALWEKYGPFDESLHYTMDFDFWLKISDYVKFHYIPECLATYRLHDASKTLEGWKPFTREHMKVERRYMEAKGGWLKWKFRWLLELMYAKSLILEGLRCRDAGDKKRAK 301
BLAST of mRNA_M-pyrifera_M_contig97940.22559.1 vs. uniprot
Match: A0A846NZT7_9ARCH (Glycosyltransferase n=1 Tax=Candidatus Aenigmarchaeota archaeon TaxID=2093792 RepID=A0A846NZT7_9ARCH) HSP 1 Score: 75.9 bits (185), Expect = 5.490e-13 Identity = 49/158 (31.01%), Postives = 75/158 (47.47%), Query Frame = 1 Query: 4 WVNSDDYLLPGALATLAAHIEQNPHERVFMSNHVRVASD-GSTIARIVPNYSPWK-LRHWWWAALQLWQPGLVFHRSAFETAGPLDARLHYAMDFDFFLKLQDVQRFHYLDADLVAFRVHDAQKGHANEVPFIEERIAATNAYWQNRSALRAVFYRYL 471 W+NSDD PGA T+ A + + + + +S V D G + +S K L +W + QP + F+R G LD +LHY MD++F+L++ ++ HY++ L RVHD K F E + YW S L +YR+L Sbjct: 120 WLNSDDCYEPGAFFTIVAELNK-VYGKYIVSGDCSVIDDRGDRVGYCKGRFSDHKDLIKYWDRDYTIPQPSVFFYRDILHECGYLDEKLHYGMDYEFWLRISKHRKIHYIEKPLAKIRVHDRAKSSPGYEVFEREWFRVSKKYWG--SLLSVNYYRHL 274
BLAST of mRNA_M-pyrifera_M_contig97940.22559.1 vs. uniprot
Match: A0A1I1WIL1_9ACTN (Glycosyltransferase involved in cell wall bisynthesis n=2 Tax=Blastococcus sp. DSM 46838 TaxID=1798228 RepID=A0A1I1WIL1_9ACTN) HSP 1 Score: 74.3 bits (181), Expect = 8.410e-13 Identity = 48/126 (38.10%), Postives = 63/126 (50.00%), Query Frame = 1 Query: 4 WVNSDDYLLPGALATLAAHIEQNPHERVFMSNHVRVASDGSTIARIVPNYSPWKLRHWWWAALQLW----QPGLVFHRSAFETAGPLDARLHYAMDFDFFLKLQDVQRFHYLDADLVAFRVHDAQK 369 W+NSDDYLLPGAL + + +P + V V DG+ I R V Y R A L L QP + RS + G LD LHY MD+D++L+L R +D + FR+HDA K Sbjct: 85 WLNSDDYLLPGALQAVGEYFAAHPEATWVTGDGVIVDVDGTPIQRPVRTYKQVLRRFGPSAYLGLANGIVQPATFWRRSVHDELGYLDESLHYTMDYDWWLRLLTTGRPGKIDRPMCGFRIHDASK 210
BLAST of mRNA_M-pyrifera_M_contig97940.22559.1 vs. uniprot
Match: A0A533SDG1_9BACT (Glycosyltransferase n=1 Tax=bacterium TaxID=1869227 RepID=A0A533SDG1_9BACT) HSP 1 Score: 75.9 bits (185), Expect = 1.100e-12 Identity = 50/177 (28.25%), Postives = 86/177 (48.59%), Query Frame = 1 Query: 4 WVNSDDYLLPGALATLAAHIEQNPHERVFMSNHVRVASDGSTIARIVPNYSPW-KLRHWWWAALQLWQPGLVFHRSAFETAGPLDARLHYAMDFDFFLKLQDVQRFHYLDADLVAFRVH-DAQKGHANEVPFIEERIAATNAYWQNRSALRAVFYRYLLYFVEG-SLVFVEALRQYE 525 W+NSDD+ PGA +A NP + + M + V +DG R++ + +LR +W + QP + F R+ + G LD LH+AMD+D +++ R +++D L +R H DA+ G + FI + + Y + ++ Y Y Y E S V + +++E Sbjct: 953 WINSDDWYEPGAFKAVADFFTANPGKNIVMGDCNLVDADGVIFDRVINQERGFDELRKYWISRSIPTQPAIFFRRNLLDEFGLLDESLHFAMDYDLWMRFSQKNRLYHIDRTLANYRFHSDAKGGDQDWSKFIPDCRIVYDRYSPPQVSVIIPCYNYGQYLAEAVSSVITQTYQEFE 1129
BLAST of mRNA_M-pyrifera_M_contig97940.22559.1 vs. uniprot
Match: A0A5A9XTA1_9DELT (Glycosyltransferase n=1 Tax=Oryzomonas rubra TaxID=2509454 RepID=A0A5A9XTA1_9DELT) HSP 1 Score: 71.2 bits (173), Expect = 1.730e-11 Identity = 40/99 (40.40%), Postives = 51/99 (51.52%), Query Frame = 1 Query: 4 WVNSDDYLLPGALATLAAHIEQNPHERVFMSNHVRVASDGSTIARIVPNYSPWKLRHWWWAALQLWQPGLVFHRSAFETAGPLDARLHYAMDFDFFLKL 300 W+NSDDYLLPGALAT+AA +NP F+ V G + P + + W QP F R A+E AG LD +H AMD D +LK+ Sbjct: 93 WLNSDDYLLPGALATIAAMYRENPTAGAFVGGGEYVDVKGKVLLSKEPAEVTLESLYDWLDIFHFMQPSCFFTREAWERAGGLDESVHVAMDVDLWLKI 191
BLAST of mRNA_M-pyrifera_M_contig97940.22559.1 vs. uniprot
Match: A0A023XSL4_BRAJP (Glyco_trans_2-like domain-containing protein n=35 Tax=Bradyrhizobiaceae TaxID=41294 RepID=A0A023XSL4_BRAJP) HSP 1 Score: 70.5 bits (171), Expect = 4.280e-11 Identity = 44/124 (35.48%), Postives = 70/124 (56.45%), Query Frame = 1 Query: 4 WVNSDDYLLPGALATLAAHIEQNPHERVFMSNHVRVASDGSTIAR-IVPNYSPWKLRHWWWAALQLWQPGLVFHRSAFETAGPLDARLHYAMDFDFFLKLQDVQ-RFHYLDADLVAFRVHDAQK 369 ++NSDD LLPGALA +A + +P+ V + V V +G + R ++P + L++ A + Q + + + ++ GP+D HYAMD+DF L+ Q + +F L L FR+HDAQK Sbjct: 157 YLNSDDMLLPGALAYVADYFMSHPNVDVVYGHRVFVDREGLEVGRAVLPPHDGKALQY----ADYIPQETMFWRKRVWDRIGPIDESFHYAMDWDFILRAQAAECKFVRLPRFLACFRIHDAQK 276
BLAST of mRNA_M-pyrifera_M_contig97940.22559.1 vs. uniprot
Match: A0A1Y2JEV4_BRAJP (Glycosyltransferase n=9 Tax=Bradyrhizobium TaxID=374 RepID=A0A1Y2JEV4_BRAJP) HSP 1 Score: 70.5 bits (171), Expect = 4.280e-11 Identity = 44/124 (35.48%), Postives = 69/124 (55.65%), Query Frame = 1 Query: 4 WVNSDDYLLPGALATLAAHIEQNPHERVFMSNHVRVASDGSTIAR-IVPNYSPWKLRHWWWAALQLWQPGLVFHRSAFETAGPLDARLHYAMDFDFFLKLQDVQ-RFHYLDADLVAFRVHDAQK 369 ++NSDD LLPGALA +A + +P + + V V +G + R ++P + L++ A + Q + + + +E GP+D HYAMD+DF L+ Q + +F L L FR+HDAQK Sbjct: 157 YLNSDDMLLPGALAYVADYFMSHPDVDIVYGHRVFVDREGLEVGRAVLPPHDGKALQY----ADYIPQETMFWRKRVWERIGPIDESFHYAMDWDFILRAQAAEFKFVRLPRFLACFRIHDAQK 276
BLAST of mRNA_M-pyrifera_M_contig97940.22559.1 vs. uniprot
Match: UPI0003FB657F (glycosyltransferase n=1 Tax=Bradyrhizobium TaxID=374 RepID=UPI0003FB657F) HSP 1 Score: 70.5 bits (171), Expect = 4.320e-11 Identity = 44/124 (35.48%), Postives = 69/124 (55.65%), Query Frame = 1 Query: 4 WVNSDDYLLPGALATLAAHIEQNPHERVFMSNHVRVASDGSTIAR-IVPNYSPWKLRHWWWAALQLWQPGLVFHRSAFETAGPLDARLHYAMDFDFFLKLQDVQ-RFHYLDADLVAFRVHDAQK 369 ++NSDD LLPGALA +A + +P + + V V +G + R ++P + L++ A + Q + + + +E GP+D HYAMD+DF L+ Q + +F L L FR+HDAQK Sbjct: 157 YLNSDDMLLPGALAYVADYFMSHPDVDIVYGHRVFVDREGLEVGRAVLPPHDGKALQY----ADYIPQETMFWRKRVWERIGPIDESFHYAMDWDFILRAQAAEFKFVRLPRFLACFRIHDAQK 276
BLAST of mRNA_M-pyrifera_M_contig97940.22559.1 vs. uniprot
Match: A0A160ULQ5_9BRAD (Glycosyl transferase family 2 CDS n=1 Tax=Bradyrhizobium sp. G22 TaxID=1839752 RepID=A0A160ULQ5_9BRAD) HSP 1 Score: 69.3 bits (168), Expect = 5.720e-11 Identity = 43/124 (34.68%), Postives = 69/124 (55.65%), Query Frame = 1 Query: 4 WVNSDDYLLPGALATLAAHIEQNPHERVFMSNHVRVASDGSTIAR-IVPNYSPWKLRHWWWAALQLWQPGLVFHRSAFETAGPLDARLHYAMDFDFFLKLQDVQ-RFHYLDADLVAFRVHDAQK 369 ++NSDD LLPGALA +A + +P V + + V +G + R ++P + L++ A + Q + + + ++ GP+D HYAMD+DF L+ Q + +F L L FR+HDAQK Sbjct: 79 YLNSDDMLLPGALAYVANYFMSHPDVDVVYGHRIFVDREGLEVGRAVLPPHDGKALQY----ADYIPQETMFWRKRVWDMIGPIDESFHYAMDWDFILRAQAAEFKFVRLPRFLACFRIHDAQK 198 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig97940.22559.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig97940.22559.1 >prot_M-pyrifera_M_contig97940.22559.1 ID=prot_M-pyrifera_M_contig97940.22559.1|Name=mRNA_M-pyrifera_M_contig97940.22559.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=183bp IWVNSDDYLLPGALATLAAHIEQNPHERVFMSNHVRVASDGSTIARIVPNback to top mRNA from alignment at M-pyrifera_M_contig97940:2..550+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig97940.22559.1 ID=mRNA_M-pyrifera_M_contig97940.22559.1|Name=mRNA_M-pyrifera_M_contig97940.22559.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=549bp|location=Sequence derived from alignment at M-pyrifera_M_contig97940:2..550+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig97940:2..550+ >mRNA_M-pyrifera_M_contig97940.22559.1 ID=mRNA_M-pyrifera_M_contig97940.22559.1|Name=mRNA_M-pyrifera_M_contig97940.22559.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1098bp|location=Sequence derived from alignment at M-pyrifera_M_contig97940:2..550+ (Macrocystis pyrifera P11B4 male)back to top |