prot_M-pyrifera_M_contig9793.22554.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig9793.22554.1
Unique Nameprot_M-pyrifera_M_contig9793.22554.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length195
Homology
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BLAST of mRNA_M-pyrifera_M_contig9793.22554.1 vs. uniprot
Match: D7FUR7_ECTSI (SET and MYND domain containing 3 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUR7_ECTSI)

HSP 1 Score: 163 bits (413), Expect = 9.120e-44
Identity = 108/205 (52.68%), Postives = 125/205 (60.98%), Query Frame = 0 
Query:    2 RQCLQPC------APEAT----APXXXXXXXXXCLRSVVCAECAAVATWSADPGDLPSCDGGGAAARSVLHGSLECEALSRLSALQRSQPDMVGSLLGGSTVYLRLLLRLLAMRAEQRGRKGTAXXXXXXXXXXXXXXXXXXXXXRGDSP--LSAIDDLEDHLDDLLDGGEMETRIMNTVEAARLVAPAAWKASQDTCAEYLGKL 194
            R+CLQP        PEAT               CLRSV+C+ C   A  SA+ G     DGGG +     HGSLEC+AL RLSALQR QPD+  SLLGGSTVYLRLLL+LLAMR+ + G   TA                      GD+   LS +DDLEDHLDDLLDGGEME R+ NT+ AARLVAPAAWKA+QD C+E+LGKL
Sbjct:   16 RRCLQPSHLSPRLVPEATPQGGTSPPHPRSCAKCLRSVLCSRCITAAD-SAEVGG----DGGGCS-----HGSLECDALVRLSALQREQPDLASSLLGGSTVYLRLLLQLLAMRSRELGTNSTAGSAAARA---------------GDATAYLSDMDDLEDHLDDLLDGGEMEARMGNTIGAARLVAPAAWKANQDVCSEFLGKL 195
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BLAST of mRNA_M-pyrifera_M_contig9793.22554.1 vs. uniprot
Match: A0A6H5KQZ9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQZ9_9PHAE)

HSP 1 Score: 87.4 bits (215), Expect = 8.830e-19
Identity = 41/50 (82.00%), Postives = 46/50 (92.00%), Query Frame = 0 
Query:  145 IDDLEDHLDDLLDGGEMETRIMNTVEAARLVAPAAWKASQDTCAEYLGKL 194
            +DDLEDHLDDLLDGGEME RI NT+ AARLVAPAAWKA+QD C+E+LGKL
Sbjct:    1 MDDLEDHLDDLLDGGEMEARIGNTIGAARLVAPAAWKANQDVCSEFLGKL 50
[Close]
BLAST of mRNA_M-pyrifera_M_contig9793.22554.1 vs. uniprot
Match: A0A6H5JVN9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVN9_9PHAE)

HSP 1 Score: 72.4 bits (176), Expect = 9.060e-13
Identity = 49/105 (46.67%), Postives = 56/105 (53.33%), Query Frame = 0 
Query:    2 RQCLQP----------CAPEATAPXXXXXXXXXCLRSVVCAECAAVATWSADPGDLPSCDGGGAAARSVLHGSLECEALSRLSALQRSQPDMVGSLLGGSTVYLR 96
            R+CLQP           AP+             CLRSV+C+ C   A      GD     GGG +     HGSLEC+AL RLSALQR QPD+  SLLGGSTVYLR
Sbjct:   16 RRCLQPSHLSPRLMPDAAPQRGTSPPHPRSCAKCLRSVLCSRCITAAETVEVGGD-----GGGCS-----HGSLECDALVRLSALQREQPDLASSLLGGSTVYLR 110
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig9793.22554.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FUR7_ECTSI9.120e-4452.68SET and MYND domain containing 3 n=1 Tax=Ectocarpu... [more]
A0A6H5KQZ9_9PHAE8.830e-1982.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JVN9_9PHAE9.060e-1346.67Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 104..194
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 83..103
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..82

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig9793contigM-pyrifera_M_contig9793:7844..10393 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig9793.22554.1mRNA_M-pyrifera_M_contig9793.22554.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig9793 7844..10393 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig9793.22554.1 ID=prot_M-pyrifera_M_contig9793.22554.1|Name=mRNA_M-pyrifera_M_contig9793.22554.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=195bp
CRQCLQPCAPEATAPSPPPPPCPVCLRSVVCAECAAVATWSADPGDLPSC
DGGGAAARSVLHGSLECEALSRLSALQRSQPDMVGSLLGGSTVYLRLLLR
LLAMRAEQRGRKGTAAAAAAAEAAAAEAAAAAAGAGRGDSPLSAIDDLED
HLDDLLDGGEMETRIMNTVEAARLVAPAAWKASQDTCAEYLGKL*
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