mRNA_M-pyrifera_M_contig9769.22494.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig9769.22494.1 vs. uniprot
Match: D8LE04_ECTSI (Tubulin delta chain n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LE04_ECTSI) HSP 1 Score: 254 bits (648), Expect = 8.700e-78 Identity = 166/272 (61.03%), Postives = 187/272 (68.75%), Query Frame = 1 Query: 4 QALRDDLPSAFVLNAAVCAHSSGEVILQNYNTMFTLSKLAKCSDGILVVENETATAVCKKLLRIERPSHADLNKVISNSLVAALIPTAIAMGGAXXXXXXXXXXXXXXXXXXRASAGETMHLGDKLAHLCPNRDFMFLQTSLVPQIPDRSREFTINTWEALVGRAHQMHITGAVADIGLDWRKKALDGAGAGVGLNQSVSSLLTFHGPCDAAAGXXXXXXASPSA--NIFRSRGLYAGWSPTPFMECRSPLRLHGHDRSISLLSNSQVRQGV 813 +ALRD+LPSAF+LN V AHSSGEVILQNYNT+FTLSKLAKCSDG+LVVEN+ ATAVC+KLLR+ERPSH DLN+VI +SLVAAL PT XXXXXXXXXXXXXXXXXX G +HLGDKLAHLCPN+DF+FL+ S+VPQ S F + E + GVGLNQSV+SLLTFHG +G XX FR RGLYAGWSPTP MECRSPLRLHGH+R+ISLLSNSQ GV Sbjct: 237 EALRDELPSAFLLNTVVGAHSSGEVILQNYNTLFTLSKLAKCSDGVLVVENDAATAVCRKLLRLERPSHTDLNEVICSSLVAALTPTTXXXXXXXXXXXXXXXXXXXXXXXXXG--GMLLHLGDKLAHLCPNKDFVFLRASIVPQ---ESTAFEGSRGERI------------------------------GVGLNQSVASLLTFHGTPVGGSGATQPXXXXXXXXXECFRIRGLYAGWSPTPLMECRSPLRLHGHERAISLLSNSQAVLGV 473
BLAST of mRNA_M-pyrifera_M_contig9769.22494.1 vs. uniprot
Match: A0A024UES8_9STRA (Tubulin delta chain n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UES8_9STRA) HSP 1 Score: 152 bits (383), Expect = 2.020e-39 Identity = 94/264 (35.61%), Postives = 138/264 (52.27%), Query Frame = 1 Query: 10 LRDDLPSAFVLNAAVCAHSSGEVILQNYNTMFTLSKLAKCSDGILVVENETATAVCKKLLRIERPSHADLNKVISNSLVAALIPTAIAMGGAXXXXXXXXXXXXXXXXXXRASAGETMHLGDKLAHLCPNRDFMFLQTSLVPQIPDRSREFTINTWEALVGRAHQMHITGAVADIGLDWRKKALDGAGAGVGLNQSVSSLLTFHGPCDAAAGXXXXXXASPSANIFRSRGLYAGWSPTPFMECRSPLRLHGHDRSISLLSNSQV 801 LR+ PS+++LN+ V + SGEVI+QNYNT+ T++ L++ SDG+L++EN+ + +C++LL I PS A +N+V++N L A L+P +S + L L HLC + + L LVPQ+ RSREF+ + W ++ HQMHI + D G+ W +LD G N+SV+S+L GP G PSA FR LY WS PF PL +D++ +LLSN Q Sbjct: 159 LRELYPSSYLLNSVVWPYRSGEVIVQNYNTLLTMACLSESSDGMLILENDLSDQICQRLLAIPAPSFAQMNQVLANHLAAVLLPVL------------------PFQKRTHSSRFSSCALPSILQHLCAHPGYKLLNVKLVPQLATRSREFSAHQWPGVLKHLHQMHIANSGMDEGVRW-DVSLDN---GQIFNKSVASMLFLRGPHSDQLGQ-----VDPSA--FRDSRLYTSWSMVPFTCMYHPLPFSQYDKTAALLSNCQA 393
BLAST of mRNA_M-pyrifera_M_contig9769.22494.1 vs. uniprot
Match: A0A485LB49_9STRA (Tubulin delta chain n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LB49_9STRA) HSP 1 Score: 149 bits (375), Expect = 2.450e-38 Identity = 85/264 (32.20%), Postives = 138/264 (52.27%), Query Frame = 1 Query: 10 LRDDLPSAFVLNAAVCAHSSGEVILQNYNTMFTLSKLAKCSDGILVVENETATAVCKKLLRIERPSHADLNKVISNSLVAALIPTAIAMGGAXXXXXXXXXXXXXXXXXXRASAGETMHLGDKLAHLCPNRDFMFLQTSLVPQIPDRSREFTINTWEALVGRAHQMHITGAVADIGLDWRKKALDGAGAGVGLNQSVSSLLTFHGPCDAAAGXXXXXXASPSANIFRSRGLYAGWSPTPFMECRSPLRLHGHDRSISLLSNSQV 801 LR+ PS+++LN V + SGEVI+QNYNT+ T++ L++ SDG+L++EN+ A +C++LL I +PS A +N V++N + + L+P + A+ + L + HLC + + L L+PQ+ RSR+F+++ W ++ HQMHI + D G+ W D + LN+S++S+L GP +S + F R L+A W TPF P +D++ +LLSNSQ Sbjct: 153 LREHYPSSYLLNTVVWPYRSGEVIVQNYNTLLTMACLSESSDGVLILENDMADQICQRLLAIPKPSFAQMNHVLANHIASILLPATPFQTAS------------------HATRFTSCLLPTIMQHLCAHPGYKLLNVKLIPQLAQRSRDFSVHQWPGMLKHLHQMHIANSGLDEGVRW-----DISLETPTLNKSIASMLFLRGP----------QSSSCLVDAFTDRRLFAKWPTTPFECVHHPASFSQYDKTAALLSNSQA 383
BLAST of mRNA_M-pyrifera_M_contig9769.22494.1 vs. uniprot
Match: W4GTD2_9STRA (Tubulin delta chain n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GTD2_9STRA) HSP 1 Score: 148 bits (374), Expect = 3.800e-38 Identity = 89/265 (33.58%), Postives = 135/265 (50.94%), Query Frame = 1 Query: 10 LRDDLPSAFVLNAAVCAHSSGEVILQNYNTMFTLSKLAKCSDGILVVENETATAVCKKLLRIERPSHADLNKVISNSLVAALIPTAIAMGGAXXXXXXXXXXXXXXXXXXRASAGETMHLGDKLAHLCPNRDFMFLQTSLVPQIPDRSREFTINTWEALVGRAHQMHITGAVADIGLDWRKKALDGAGAGVGLNQSVSSLLTFHGP-CDAAAGXXXXXXASPSANIFRSRGLYAGWSPTPFMECRSPLRLHGHDRSISLLSNSQV 801 LR+ P++++LN V + SGEVI+QNYNT+ T++ L++ SDG+L+VEN+ A +C++LL I PS +N+V++N + A L+P S + L + HLC + F L LVPQ+ RSR+F+++ W ++ HQMHI + D G+ W +G +N+SV+S+L GP CD P A FR LY W+ PF P +D++ +LLSNSQ Sbjct: 158 LRELYPTSYLLNTVVWPYRSGEVIVQNYNTLLTMACLSESSDGVLIVENDLADQICRRLLAIPTPSFHQMNQVLTNHIAAMLMPAL------------------PFQKDTHTSRFSSCALPSIIQHLCAHPGFKLLNVKLVPQLAQRSRDFSVHQWPGVLKHLHQMHIANSGMDEGVRWDVSLENGP-----INKSVASMLFVRGPHCDGQV--------DPFA--FRDPRLYCPWTTAPFTCMYHPRAFSEYDKTAALLSNSQA 389
BLAST of mRNA_M-pyrifera_M_contig9769.22494.1 vs. uniprot
Match: A0A6G0XD18_9STRA (Tubulin delta chain n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XD18_9STRA) HSP 1 Score: 141 bits (355), Expect = 1.430e-35 Identity = 80/265 (30.19%), Postives = 136/265 (51.32%), Query Frame = 1 Query: 10 LRDDLPSAFVLNAAVCAHSSGEVILQNYNTMFTLSKLAKCSDGILVVENETATAVCKKLLRIERPSHADLNKVISNSLVAALIPTAIAMGGAXXXXXXXXXXXXXXXXXXRASAGETMHLGDKLAHLCPNRDFMFLQTSLVPQIPDRSREFTINTWEALVGRAHQMHITGAVADIGLDWRKKALDGAGAGVGLNQSVSSLLTFHGPCDAAAGXXXXXXASPSANIFRSRGLYAGW-SPTPFMECRSPLRLHGHDRSISLLSNSQV 801 LR+ PS+++LN V + SGEVI+QNYNT+ T++ L++ SDGI+++EN+ A +C++LL I +PS +N+V++N + A L+P ++ + L + HLC + + L L+P + RSR+F+++ W ++ HQM I A D G+ W +G+ +N+S++++L GP + S S + F+ LY W +PF P +D++ +LLSNSQ Sbjct: 152 LREHYPSSYLLNTVVWPYRSGEVIVQNYNTLLTMACLSESSDGIMILENDLADQICRRLLAISKPSFGAMNQVLANHMAAVLLPAQ------------------PLQKTTHSTRFTSCLLPTVMQHLCSHPGYKLLNVKLLPHLAQRSRDFSVHQWPGVLKHLHQMQIANAGMDEGVRWDVSL---SGSSHHINKSIAAMLFLRGPYNPQE--------SSSIDAFKDPRLYGSWLGSSPFQCVHHPASFSQYDKTAALLSNSQA 387
BLAST of mRNA_M-pyrifera_M_contig9769.22494.1 vs. uniprot
Match: A0A1Y1HU41_KLENI (Tubulin delta chain n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1HU41_KLENI) HSP 1 Score: 141 bits (355), Expect = 2.270e-35 Identity = 95/278 (34.17%), Postives = 135/278 (48.56%), Query Frame = 1 Query: 10 LRDDLPSAFVLNAAVCAHSSGEVILQNYNTMFTLSKLAKCSDGILVVENETATAVCKKLLRIERPSHADLNKVISNSLVAALIPT-------AIAMGGAXXXXXXXXXXXXXXXXXXRASAGETMHLGDKLAHLCPNRDFMFLQTSLVPQIPDRSREFTINTWEALVGRAHQMHITGAVADIGLDWRKKALDGA-------GAGVGLNQSVSSLLTFHGPCDAAAGXXXXXXASPSANIFRSRGLYAGWSPTPFMECRSPLRLHGHDRSISLLSNSQV 801 LRD+ P++ +L V H SGEVI+Q+YN M TL KLA+ +DG+++VENE TA C++LL I RPS+ DLN V +L L+P ++ +GGA L D ++ +C + + L +PQIP S +FT TW +LV + QM +GA + +DW A GA G +N+SVSSLL G A+G ASP+ LY W+ P SP + ++ + LLSN Q Sbjct: 152 LRDEYPASPLLGHCVWPHESGEVIVQSYNAMLTLPKLAQAADGVILVENEALTATCRRLLNISRPSYTDLNLVAGRALACVLLPAQWRSEADSVGVGGARFRP-----------------------LSDLVSAVCAHPHYPLLSLRALPQIPPASVDFTTFTWPSLVRQLRQMASSGAPLESAVDWA--AASGAPSSPPPAGTFRSVNKSVSSLLVLRGK--GASGVDVSSFASPT--------LYPSWAVDPLTVISSPTQFGKYEMATGLLSNCQT 394
BLAST of mRNA_M-pyrifera_M_contig9769.22494.1 vs. uniprot
Match: A0A1V9ZME0_9STRA (Tubulin delta chain n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZME0_9STRA) HSP 1 Score: 138 bits (347), Expect = 5.180e-34 Identity = 86/264 (32.58%), Postives = 131/264 (49.62%), Query Frame = 1 Query: 10 LRDDLPSAFVLNAAVCAHSSGEVILQNYNTMFTLSKLAKCSDGILVVENETATAVCKKLLRIERPSHADLNKVISNSLVAALIPTAIAMGGAXXXXXXXXXXXXXXXXXXRASAGETMHLGDKLAHLCPNRDFMFLQTSLVPQIPDRSREFTINTWEALVGRAHQMHITGAVADIGLDWRKKALDGAGAGVGLNQSVSSLLTFHGPCDAAAGXXXXXXASPSANIFRSRGLYAGWSPTPFMECRSPLRLHGHDRSISLLSNSQV 801 L D P +F+LN V + SGEVI+QNYNT+ T++ L++ SDGI V+ N+ A +C+KLL I +PS +N V++N + + L+P A L L LC + + + +VPQ+ RSR F+ + W ++ HQM I + D G++W +LD + V +N+SV SLL GP AA +A+ F R +Y W+ TP S + +D++ +LLSNSQ Sbjct: 201 LHDQFPHSFLLNTVVWPYHSGEVIVQNYNTLLTMACLSESSDGIFVLRNDVADKICQKLLTIPKPSLDQMNGVLANHIASVLLPAQTN------------------------DASPRCQLPLILQELCSHPGYKLMDVKVVPQLSSRSRAFSAHQWAGVLKHLHQMQIANSSLDEGVNW-DISLDTSPRAV-VNKSVGSLLYVRGPDTAAV----------AADAFLDRRMYCPWASTPCQVLASTAPFNEYDKTAALLSNSQT 428
BLAST of mRNA_M-pyrifera_M_contig9769.22494.1 vs. uniprot
Match: A0A2D4CDP5_PYTIN (Tubulin delta chain n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CDP5_PYTIN) HSP 1 Score: 136 bits (343), Expect = 9.220e-34 Identity = 83/263 (31.56%), Postives = 127/263 (48.29%), Query Frame = 1 Query: 16 DDLPSAFVLNAAVCAHSSGEVILQNYNTMFTLSKLAKCSDGILVVENETATAVCKKLLRIERPSHADLNKVISNSLVAALIPTAIAMGGAXXXXXXXXXXXXXXXXXXRASAGETMHLGDKLAHLCPNRDFMFLQTSLVPQIPDRSREFTINTWEALVGRAHQMHITGAVADIGLDWRKKALDGAGAGVGLNQSVSSLLTFHG-PCDAAAGXXXXXXASPSANIFRSRGLYAGWSPTPFMECRSPLRLHGHDRSISLLSNSQV 801 D LP A VLNA V + SGEVI+QNYN + T++ LA +DGILV++N+ A +C++LL+I RPS ++N+V++ L +AL+P G G LC + F L +PQ+P RS+EF+ +TW + HQM + + + G+DW +G N++V+S L G D A A F R +Y WS P R+ + +D++ +L+SNS+ Sbjct: 156 DALPHARVLNAVVWPYQSGEVIVQNYNAVLTMASLAAAADGILVLQNDVANEICRRLLQIARPSFEEMNRVLATHLASALLPLE----------------------------GTRDVTGALCEQLCSHPGFKLLDIKTIPQMPQRSKEFSTHTWTGXLKHLHQMQVANSPLEEGIDWSVSLQTPSGRA--WNRAVASALMLRGVDADKA-----------DATAFHRREMYTSWSVRPMEVYRTRKTFNHYDKTATLISNSKA 377
BLAST of mRNA_M-pyrifera_M_contig9769.22494.1 vs. uniprot
Match: D8TV44_VOLCA (Tubulin delta chain n=1 Tax=Volvox carteri f. nagariensis TaxID=3068 RepID=D8TV44_VOLCA) HSP 1 Score: 135 bits (339), Expect = 4.340e-33 Identity = 89/274 (32.48%), Postives = 134/274 (48.91%), Query Frame = 1 Query: 4 QALRDDLPSAFVLNAAVCAHSSGEVILQNYNTMFTLSKLAKCSDGILVVENETATAVCKKLLRIERPSHADLNKVISNSLVAALIPTAIAMGGAXXXXXXXXXXXXXXXXXXRASAGETMHLGDKLAHLCPNRDFMFLQTSLVPQIPDRSREFTINTWEALVGRAHQMHITGAVADIGLDWRKKALDGAGA-GVG--------LNQSVSSLLTFHGPCDAAAGXXXXXXASPSANIFRSRGLYAGWSPTPFMECRSPLRLHGHDRSISLLSNSQ 798 QALRD+ SAF+ N V + SGEVI+Q YNT+FTLS L+ SDGI+++ENE C +L+ I RPS AD+N + + ++ + L+P+ + ++ T L D + LCP+ + L +PQ+P S +FT TW A++ R QM +TG+V + G+DW AGA G G +N++V++ L G A A P+ L + W+ P +P + S SLLSN + Sbjct: 149 QALRDEYHSAFITNCCVWPYESGEVIVQPYNTLFTLSHLSDLSDGIVLLENEALHLTCARLMGIPRPSFADMNGIAARAMASVLLPSRLR---------------------GPTNSSTTSPLADLVTQLCPHPAYRMLTLRAIPQLPPASIDFTTFTWPAILKRLRQMLVTGSVLEEGMDWSINPHSPAGARGTGATCGSSPRVNRAVANWLVLRG--QGAGDVDVGEFADPA--------LTSAWTVDPLSVSYNPAKFGRCLMSASLLSNDR 391
BLAST of mRNA_M-pyrifera_M_contig9769.22494.1 vs. uniprot
Match: A0A8K1FP50_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FP50_PYTOL) HSP 1 Score: 134 bits (337), Expect = 8.150e-33 Identity = 85/276 (30.80%), Postives = 135/276 (48.91%), Query Frame = 1 Query: 10 LRDDLPSAFVLNAAVCAHSSGEVILQNYNTMFTLSKLAKCSDGILVVENETATAVCKKLLRIERPSHADLNKVISNSLVAALIPTAIAMGGAXXXXXXXXXXXXXXXXXXRASAGETMHLGDKLAHLCPNRDFMFLQTSLVPQIPDRSREFTINTWEALVGRAHQMHITGAVADIGLDWRKKALDGAGAGVGL-NQSVSSLLTFHGP----CDAAAGXXXXXXASPSANIFRSRGLYAGWSPTPFMECRSPLRLHGHDRSISLLSNSQVRQGVAVS 822 + D S+ +LN V + SGEVI+QNYN + T++ +A +DGILV++N+ A +CK+LL + RPS +N V++ L + +P G S+ E + + LC + F L +PQ+P RS+EF+ +TW ++ HQM I + + G+DW+ +LDG + N ++ +LL G CD +A FR G+YA WS PF S R + +D+S +L+SNS+ + S Sbjct: 152 IADAYSSSLLLNTVVWPYQSGEVIVQNYNAILTMASVADVADGILVLQNDVANEICKRLLNMPRPSFDAINSVLATHLASVFLPVHNKQDG---------------NTNSTRSSTEGDVIQEMCERLCSHAGFKLLDIKTIPQMPHRSKEFSTHTWTGILKHLHQMQIANSPLEEGIDWQI-SLDGKSSRRSWRNTALGNLLILRGDDSDSCDVSA--------------FRHPGMYAPWSLQPFECYVSKHRFNAYDKSATLVSNSKSLLPILTS 397 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig9769.22494.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig9769.22494.1 >prot_M-pyrifera_M_contig9769.22494.1 ID=prot_M-pyrifera_M_contig9769.22494.1|Name=mRNA_M-pyrifera_M_contig9769.22494.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=278bp MQALRDDLPSAFVLNAAVCAHSSGEVILQNYNTMFTLSKLAKCSDGILVVback to top mRNA from alignment at M-pyrifera_M_contig9769:55..4671+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig9769.22494.1 ID=mRNA_M-pyrifera_M_contig9769.22494.1|Name=mRNA_M-pyrifera_M_contig9769.22494.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=4617bp|location=Sequence derived from alignment at M-pyrifera_M_contig9769:55..4671+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig9769:55..4671+ >mRNA_M-pyrifera_M_contig9769.22494.1 ID=mRNA_M-pyrifera_M_contig9769.22494.1|Name=mRNA_M-pyrifera_M_contig9769.22494.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1668bp|location=Sequence derived from alignment at M-pyrifera_M_contig9769:55..4671+ (Macrocystis pyrifera P11B4 male)back to top |