mRNA_M-pyrifera_M_contig9769.22494.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig9769.22494.1
Unique NamemRNA_M-pyrifera_M_contig9769.22494.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig9769.22494.1 vs. uniprot
Match: D8LE04_ECTSI (Tubulin delta chain n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LE04_ECTSI)

HSP 1 Score: 254 bits (648), Expect = 8.700e-78
Identity = 166/272 (61.03%), Postives = 187/272 (68.75%), Query Frame = 1
Query:    4 QALRDDLPSAFVLNAAVCAHSSGEVILQNYNTMFTLSKLAKCSDGILVVENETATAVCKKLLRIERPSHADLNKVISNSLVAALIPTAIAMGGAXXXXXXXXXXXXXXXXXXRASAGETMHLGDKLAHLCPNRDFMFLQTSLVPQIPDRSREFTINTWEALVGRAHQMHITGAVADIGLDWRKKALDGAGAGVGLNQSVSSLLTFHGPCDAAAGXXXXXXASPSA--NIFRSRGLYAGWSPTPFMECRSPLRLHGHDRSISLLSNSQVRQGV 813
            +ALRD+LPSAF+LN  V AHSSGEVILQNYNT+FTLSKLAKCSDG+LVVEN+ ATAVC+KLLR+ERPSH DLN+VI +SLVAAL PT       XXXXXXXXXXXXXXXXXX    G  +HLGDKLAHLCPN+DF+FL+ S+VPQ    S  F  +  E +                              GVGLNQSV+SLLTFHG     +G    XX         FR RGLYAGWSPTP MECRSPLRLHGH+R+ISLLSNSQ   GV
Sbjct:  237 EALRDELPSAFLLNTVVGAHSSGEVILQNYNTLFTLSKLAKCSDGVLVVENDAATAVCRKLLRLERPSHTDLNEVICSSLVAALTPTTXXXXXXXXXXXXXXXXXXXXXXXXXG--GMLLHLGDKLAHLCPNKDFVFLRASIVPQ---ESTAFEGSRGERI------------------------------GVGLNQSVASLLTFHGTPVGGSGATQPXXXXXXXXXECFRIRGLYAGWSPTPLMECRSPLRLHGHERAISLLSNSQAVLGV 473          
BLAST of mRNA_M-pyrifera_M_contig9769.22494.1 vs. uniprot
Match: A0A024UES8_9STRA (Tubulin delta chain n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UES8_9STRA)

HSP 1 Score: 152 bits (383), Expect = 2.020e-39
Identity = 94/264 (35.61%), Postives = 138/264 (52.27%), Query Frame = 1
Query:   10 LRDDLPSAFVLNAAVCAHSSGEVILQNYNTMFTLSKLAKCSDGILVVENETATAVCKKLLRIERPSHADLNKVISNSLVAALIPTAIAMGGAXXXXXXXXXXXXXXXXXXRASAGETMHLGDKLAHLCPNRDFMFLQTSLVPQIPDRSREFTINTWEALVGRAHQMHITGAVADIGLDWRKKALDGAGAGVGLNQSVSSLLTFHGPCDAAAGXXXXXXASPSANIFRSRGLYAGWSPTPFMECRSPLRLHGHDRSISLLSNSQV 801
            LR+  PS+++LN+ V  + SGEVI+QNYNT+ T++ L++ SDG+L++EN+ +  +C++LL I  PS A +N+V++N L A L+P                           +S   +  L   L HLC +  +  L   LVPQ+  RSREF+ + W  ++   HQMHI  +  D G+ W   +LD    G   N+SV+S+L   GP     G        PSA  FR   LY  WS  PF     PL    +D++ +LLSN Q 
Sbjct:  159 LRELYPSSYLLNSVVWPYRSGEVIVQNYNTLLTMACLSESSDGMLILENDLSDQICQRLLAIPAPSFAQMNQVLANHLAAVLLPVL------------------PFQKRTHSSRFSSCALPSILQHLCAHPGYKLLNVKLVPQLATRSREFSAHQWPGVLKHLHQMHIANSGMDEGVRW-DVSLDN---GQIFNKSVASMLFLRGPHSDQLGQ-----VDPSA--FRDSRLYTSWSMVPFTCMYHPLPFSQYDKTAALLSNCQA 393          
BLAST of mRNA_M-pyrifera_M_contig9769.22494.1 vs. uniprot
Match: A0A485LB49_9STRA (Tubulin delta chain n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LB49_9STRA)

HSP 1 Score: 149 bits (375), Expect = 2.450e-38
Identity = 85/264 (32.20%), Postives = 138/264 (52.27%), Query Frame = 1
Query:   10 LRDDLPSAFVLNAAVCAHSSGEVILQNYNTMFTLSKLAKCSDGILVVENETATAVCKKLLRIERPSHADLNKVISNSLVAALIPTAIAMGGAXXXXXXXXXXXXXXXXXXRASAGETMHLGDKLAHLCPNRDFMFLQTSLVPQIPDRSREFTINTWEALVGRAHQMHITGAVADIGLDWRKKALDGAGAGVGLNQSVSSLLTFHGPCDAAAGXXXXXXASPSANIFRSRGLYAGWSPTPFMECRSPLRLHGHDRSISLLSNSQV 801
            LR+  PS+++LN  V  + SGEVI+QNYNT+ T++ L++ SDG+L++EN+ A  +C++LL I +PS A +N V++N + + L+P       +                   A+   +  L   + HLC +  +  L   L+PQ+  RSR+F+++ W  ++   HQMHI  +  D G+ W     D +     LN+S++S+L   GP            +S   + F  R L+A W  TPF     P     +D++ +LLSNSQ 
Sbjct:  153 LREHYPSSYLLNTVVWPYRSGEVIVQNYNTLLTMACLSESSDGVLILENDMADQICQRLLAIPKPSFAQMNHVLANHIASILLPATPFQTAS------------------HATRFTSCLLPTIMQHLCAHPGYKLLNVKLIPQLAQRSRDFSVHQWPGMLKHLHQMHIANSGLDEGVRW-----DISLETPTLNKSIASMLFLRGP----------QSSSCLVDAFTDRRLFAKWPTTPFECVHHPASFSQYDKTAALLSNSQA 383          
BLAST of mRNA_M-pyrifera_M_contig9769.22494.1 vs. uniprot
Match: W4GTD2_9STRA (Tubulin delta chain n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GTD2_9STRA)

HSP 1 Score: 148 bits (374), Expect = 3.800e-38
Identity = 89/265 (33.58%), Postives = 135/265 (50.94%), Query Frame = 1
Query:   10 LRDDLPSAFVLNAAVCAHSSGEVILQNYNTMFTLSKLAKCSDGILVVENETATAVCKKLLRIERPSHADLNKVISNSLVAALIPTAIAMGGAXXXXXXXXXXXXXXXXXXRASAGETMHLGDKLAHLCPNRDFMFLQTSLVPQIPDRSREFTINTWEALVGRAHQMHITGAVADIGLDWRKKALDGAGAGVGLNQSVSSLLTFHGP-CDAAAGXXXXXXASPSANIFRSRGLYAGWSPTPFMECRSPLRLHGHDRSISLLSNSQV 801
            LR+  P++++LN  V  + SGEVI+QNYNT+ T++ L++ SDG+L+VEN+ A  +C++LL I  PS   +N+V++N + A L+P                            S   +  L   + HLC +  F  L   LVPQ+  RSR+F+++ W  ++   HQMHI  +  D G+ W     +G      +N+SV+S+L   GP CD            P A  FR   LY  W+  PF     P     +D++ +LLSNSQ 
Sbjct:  158 LRELYPTSYLLNTVVWPYRSGEVIVQNYNTLLTMACLSESSDGVLIVENDLADQICRRLLAIPTPSFHQMNQVLTNHIAAMLMPAL------------------PFQKDTHTSRFSSCALPSIIQHLCAHPGFKLLNVKLVPQLAQRSRDFSVHQWPGVLKHLHQMHIANSGMDEGVRWDVSLENGP-----INKSVASMLFVRGPHCDGQV--------DPFA--FRDPRLYCPWTTAPFTCMYHPRAFSEYDKTAALLSNSQA 389          
BLAST of mRNA_M-pyrifera_M_contig9769.22494.1 vs. uniprot
Match: A0A6G0XD18_9STRA (Tubulin delta chain n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XD18_9STRA)

HSP 1 Score: 141 bits (355), Expect = 1.430e-35
Identity = 80/265 (30.19%), Postives = 136/265 (51.32%), Query Frame = 1
Query:   10 LRDDLPSAFVLNAAVCAHSSGEVILQNYNTMFTLSKLAKCSDGILVVENETATAVCKKLLRIERPSHADLNKVISNSLVAALIPTAIAMGGAXXXXXXXXXXXXXXXXXXRASAGETMHLGDKLAHLCPNRDFMFLQTSLVPQIPDRSREFTINTWEALVGRAHQMHITGAVADIGLDWRKKALDGAGAGVGLNQSVSSLLTFHGPCDAAAGXXXXXXASPSANIFRSRGLYAGW-SPTPFMECRSPLRLHGHDRSISLLSNSQV 801
            LR+  PS+++LN  V  + SGEVI+QNYNT+ T++ L++ SDGI+++EN+ A  +C++LL I +PS   +N+V++N + A L+P                           ++   +  L   + HLC +  +  L   L+P +  RSR+F+++ W  ++   HQM I  A  D G+ W       +G+   +N+S++++L   GP +           S S + F+   LY  W   +PF     P     +D++ +LLSNSQ 
Sbjct:  152 LREHYPSSYLLNTVVWPYRSGEVIVQNYNTLLTMACLSESSDGIMILENDLADQICRRLLAISKPSFGAMNQVLANHMAAVLLPAQ------------------PLQKTTHSTRFTSCLLPTVMQHLCSHPGYKLLNVKLLPHLAQRSRDFSVHQWPGVLKHLHQMQIANAGMDEGVRWDVSL---SGSSHHINKSIAAMLFLRGPYNPQE--------SSSIDAFKDPRLYGSWLGSSPFQCVHHPASFSQYDKTAALLSNSQA 387          
BLAST of mRNA_M-pyrifera_M_contig9769.22494.1 vs. uniprot
Match: A0A1Y1HU41_KLENI (Tubulin delta chain n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1HU41_KLENI)

HSP 1 Score: 141 bits (355), Expect = 2.270e-35
Identity = 95/278 (34.17%), Postives = 135/278 (48.56%), Query Frame = 1
Query:   10 LRDDLPSAFVLNAAVCAHSSGEVILQNYNTMFTLSKLAKCSDGILVVENETATAVCKKLLRIERPSHADLNKVISNSLVAALIPT-------AIAMGGAXXXXXXXXXXXXXXXXXXRASAGETMHLGDKLAHLCPNRDFMFLQTSLVPQIPDRSREFTINTWEALVGRAHQMHITGAVADIGLDWRKKALDGA-------GAGVGLNQSVSSLLTFHGPCDAAAGXXXXXXASPSANIFRSRGLYAGWSPTPFMECRSPLRLHGHDRSISLLSNSQV 801
            LRD+ P++ +L   V  H SGEVI+Q+YN M TL KLA+ +DG+++VENE  TA C++LL I RPS+ DLN V   +L   L+P        ++ +GGA                           L D ++ +C +  +  L    +PQIP  S +FT  TW +LV +  QM  +GA  +  +DW   A  GA       G    +N+SVSSLL   G    A+G      ASP+        LY  W+  P     SP +   ++ +  LLSN Q 
Sbjct:  152 LRDEYPASPLLGHCVWPHESGEVIVQSYNAMLTLPKLAQAADGVILVENEALTATCRRLLNISRPSYTDLNLVAGRALACVLLPAQWRSEADSVGVGGARFRP-----------------------LSDLVSAVCAHPHYPLLSLRALPQIPPASVDFTTFTWPSLVRQLRQMASSGAPLESAVDWA--AASGAPSSPPPAGTFRSVNKSVSSLLVLRGK--GASGVDVSSFASPT--------LYPSWAVDPLTVISSPTQFGKYEMATGLLSNCQT 394          
BLAST of mRNA_M-pyrifera_M_contig9769.22494.1 vs. uniprot
Match: A0A1V9ZME0_9STRA (Tubulin delta chain n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZME0_9STRA)

HSP 1 Score: 138 bits (347), Expect = 5.180e-34
Identity = 86/264 (32.58%), Postives = 131/264 (49.62%), Query Frame = 1
Query:   10 LRDDLPSAFVLNAAVCAHSSGEVILQNYNTMFTLSKLAKCSDGILVVENETATAVCKKLLRIERPSHADLNKVISNSLVAALIPTAIAMGGAXXXXXXXXXXXXXXXXXXRASAGETMHLGDKLAHLCPNRDFMFLQTSLVPQIPDRSREFTINTWEALVGRAHQMHITGAVADIGLDWRKKALDGAGAGVGLNQSVSSLLTFHGPCDAAAGXXXXXXASPSANIFRSRGLYAGWSPTPFMECRSPLRLHGHDRSISLLSNSQV 801
            L D  P +F+LN  V  + SGEVI+QNYNT+ T++ L++ SDGI V+ N+ A  +C+KLL I +PS   +N V++N + + L+P                             A     L   L  LC +  +  +   +VPQ+  RSR F+ + W  ++   HQM I  +  D G++W   +LD +   V +N+SV SLL   GP  AA           +A+ F  R +Y  W+ TP     S    + +D++ +LLSNSQ 
Sbjct:  201 LHDQFPHSFLLNTVVWPYHSGEVIVQNYNTLLTMACLSESSDGIFVLRNDVADKICQKLLTIPKPSLDQMNGVLANHIASVLLPAQTN------------------------DASPRCQLPLILQELCSHPGYKLMDVKVVPQLSSRSRAFSAHQWAGVLKHLHQMQIANSSLDEGVNW-DISLDTSPRAV-VNKSVGSLLYVRGPDTAAV----------AADAFLDRRMYCPWASTPCQVLASTAPFNEYDKTAALLSNSQT 428          
BLAST of mRNA_M-pyrifera_M_contig9769.22494.1 vs. uniprot
Match: A0A2D4CDP5_PYTIN (Tubulin delta chain n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CDP5_PYTIN)

HSP 1 Score: 136 bits (343), Expect = 9.220e-34
Identity = 83/263 (31.56%), Postives = 127/263 (48.29%), Query Frame = 1
Query:   16 DDLPSAFVLNAAVCAHSSGEVILQNYNTMFTLSKLAKCSDGILVVENETATAVCKKLLRIERPSHADLNKVISNSLVAALIPTAIAMGGAXXXXXXXXXXXXXXXXXXRASAGETMHLGDKLAHLCPNRDFMFLQTSLVPQIPDRSREFTINTWEALVGRAHQMHITGAVADIGLDWRKKALDGAGAGVGLNQSVSSLLTFHG-PCDAAAGXXXXXXASPSANIFRSRGLYAGWSPTPFMECRSPLRLHGHDRSISLLSNSQV 801
            D LP A VLNA V  + SGEVI+QNYN + T++ LA  +DGILV++N+ A  +C++LL+I RPS  ++N+V++  L +AL+P                              G     G     LC +  F  L    +PQ+P RS+EF+ +TW   +   HQM +  +  + G+DW       +G     N++V+S L   G   D A            A  F  R +Y  WS  P    R+    + +D++ +L+SNS+ 
Sbjct:  156 DALPHARVLNAVVWPYQSGEVIVQNYNAVLTMASLAAAADGILVLQNDVANEICRRLLQIARPSFEEMNRVLATHLASALLPLE----------------------------GTRDVTGALCEQLCSHPGFKLLDIKTIPQMPQRSKEFSTHTWTGXLKHLHQMQVANSPLEEGIDWSVSLQTPSGRA--WNRAVASALMLRGVDADKA-----------DATAFHRREMYTSWSVRPMEVYRTRKTFNHYDKTATLISNSKA 377          
BLAST of mRNA_M-pyrifera_M_contig9769.22494.1 vs. uniprot
Match: D8TV44_VOLCA (Tubulin delta chain n=1 Tax=Volvox carteri f. nagariensis TaxID=3068 RepID=D8TV44_VOLCA)

HSP 1 Score: 135 bits (339), Expect = 4.340e-33
Identity = 89/274 (32.48%), Postives = 134/274 (48.91%), Query Frame = 1
Query:    4 QALRDDLPSAFVLNAAVCAHSSGEVILQNYNTMFTLSKLAKCSDGILVVENETATAVCKKLLRIERPSHADLNKVISNSLVAALIPTAIAMGGAXXXXXXXXXXXXXXXXXXRASAGETMHLGDKLAHLCPNRDFMFLQTSLVPQIPDRSREFTINTWEALVGRAHQMHITGAVADIGLDWRKKALDGAGA-GVG--------LNQSVSSLLTFHGPCDAAAGXXXXXXASPSANIFRSRGLYAGWSPTPFMECRSPLRLHGHDRSISLLSNSQ 798
            QALRD+  SAF+ N  V  + SGEVI+Q YNT+FTLS L+  SDGI+++ENE     C +L+ I RPS AD+N + + ++ + L+P+ +                         ++  T  L D +  LCP+  +  L    +PQ+P  S +FT  TW A++ R  QM +TG+V + G+DW       AGA G G        +N++V++ L   G    A        A P+        L + W+  P     +P +      S SLLSN +
Sbjct:  149 QALRDEYHSAFITNCCVWPYESGEVIVQPYNTLFTLSHLSDLSDGIVLLENEALHLTCARLMGIPRPSFADMNGIAARAMASVLLPSRLR---------------------GPTNSSTTSPLADLVTQLCPHPAYRMLTLRAIPQLPPASIDFTTFTWPAILKRLRQMLVTGSVLEEGMDWSINPHSPAGARGTGATCGSSPRVNRAVANWLVLRG--QGAGDVDVGEFADPA--------LTSAWTVDPLSVSYNPAKFGRCLMSASLLSNDR 391          
BLAST of mRNA_M-pyrifera_M_contig9769.22494.1 vs. uniprot
Match: A0A8K1FP50_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FP50_PYTOL)

HSP 1 Score: 134 bits (337), Expect = 8.150e-33
Identity = 85/276 (30.80%), Postives = 135/276 (48.91%), Query Frame = 1
Query:   10 LRDDLPSAFVLNAAVCAHSSGEVILQNYNTMFTLSKLAKCSDGILVVENETATAVCKKLLRIERPSHADLNKVISNSLVAALIPTAIAMGGAXXXXXXXXXXXXXXXXXXRASAGETMHLGDKLAHLCPNRDFMFLQTSLVPQIPDRSREFTINTWEALVGRAHQMHITGAVADIGLDWRKKALDGAGAGVGL-NQSVSSLLTFHGP----CDAAAGXXXXXXASPSANIFRSRGLYAGWSPTPFMECRSPLRLHGHDRSISLLSNSQVRQGVAVS 822
            + D   S+ +LN  V  + SGEVI+QNYN + T++ +A  +DGILV++N+ A  +CK+LL + RPS   +N V++  L +  +P      G                     S+ E   + +    LC +  F  L    +PQ+P RS+EF+ +TW  ++   HQM I  +  + G+DW+  +LDG  +     N ++ +LL   G     CD +A              FR  G+YA WS  PF    S  R + +D+S +L+SNS+    +  S
Sbjct:  152 IADAYSSSLLLNTVVWPYQSGEVIVQNYNAILTMASVADVADGILVLQNDVANEICKRLLNMPRPSFDAINSVLATHLASVFLPVHNKQDG---------------NTNSTRSSTEGDVIQEMCERLCSHAGFKLLDIKTIPQMPHRSKEFSTHTWTGILKHLHQMQIANSPLEEGIDWQI-SLDGKSSRRSWRNTALGNLLILRGDDSDSCDVSA--------------FRHPGMYAPWSLQPFECYVSKHRFNAYDKSATLVSNSKSLLPILTS 397          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig9769.22494.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LE04_ECTSI8.700e-7861.03Tubulin delta chain n=1 Tax=Ectocarpus siliculosus... [more]
A0A024UES8_9STRA2.020e-3935.61Tubulin delta chain n=1 Tax=Aphanomyces invadans T... [more]
A0A485LB49_9STRA2.450e-3832.20Tubulin delta chain n=1 Tax=Aphanomyces stellatus ... [more]
W4GTD2_9STRA3.800e-3833.58Tubulin delta chain n=1 Tax=Aphanomyces astaci Tax... [more]
A0A6G0XD18_9STRA1.430e-3530.19Tubulin delta chain n=1 Tax=Aphanomyces euteiches ... [more]
A0A1Y1HU41_KLENI2.270e-3534.17Tubulin delta chain n=1 Tax=Klebsormidium nitens T... [more]
A0A1V9ZME0_9STRA5.180e-3432.58Tubulin delta chain n=1 Tax=Achlya hypogyna TaxID=... [more]
A0A2D4CDP5_PYTIN9.220e-3431.56Tubulin delta chain n=1 Tax=Pythium insidiosum Tax... [more]
D8TV44_VOLCA4.340e-3332.48Tubulin delta chain n=1 Tax=Volvox carteri f. naga... [more]
A0A8K1FP50_PYTOL8.150e-3330.80Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig9769contigM-pyrifera_M_contig9769:55..4671 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score254.6
Seed ortholog evalue5.3e-65
Seed eggNOG ortholog2880.D8LE04
Preferred nameTUBD1
KEGG koko:K10390
Hectar predicted targeting categoryother localisation
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005814,GO:0005815,GO:0005829,GO:0005856,GO:0008150,GO:0008589,GO:0009966,GO:0009967,GO:0010646,GO:0010647,GO:0015630,GO:0023051,GO:0023056,GO:0031974,GO:0031981,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044422,GO:0044424,GO:0044428,GO:0044430,GO:0044444,GO:0044446,GO:0044450,GO:0044464,GO:0045880,GO:0048518,GO:0048522,GO:0048583,GO:0048584,GO:0050789,GO:0050794,GO:0065007,GO:0070013
EggNOG free text desc.microtubule nucleation
EggNOG OGsCOG5023@1,KOG1374@2759
COG Functional cat.Z
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03036,ko04812
Exons5
Model size834
Cds size834
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig9769.22494.1prot_M-pyrifera_M_contig9769.22494.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig9769 55..4671 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816893.6914074-CDS-M-pyrifera_M_contig9769:54..1981622816893.6914074-CDS-M-pyrifera_M_contig9769:54..198Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig9769 55..198 +
1692278240.8692749-CDS-M-pyrifera_M_contig9769:54..1981692278240.8692749-CDS-M-pyrifera_M_contig9769:54..198Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig9769 55..198 +
1622816893.7042735-CDS-M-pyrifera_M_contig9769:1131..14251622816893.7042735-CDS-M-pyrifera_M_contig9769:1131..1425Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig9769 1132..1425 +
1692278240.8815799-CDS-M-pyrifera_M_contig9769:1131..14251692278240.8815799-CDS-M-pyrifera_M_contig9769:1131..1425Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig9769 1132..1425 +
1622816893.7170653-CDS-M-pyrifera_M_contig9769:2595..27341622816893.7170653-CDS-M-pyrifera_M_contig9769:2595..2734Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig9769 2596..2734 +
1692278240.8932312-CDS-M-pyrifera_M_contig9769:2595..27341692278240.8932312-CDS-M-pyrifera_M_contig9769:2595..2734Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig9769 2596..2734 +
1622816893.7278378-CDS-M-pyrifera_M_contig9769:3625..37491622816893.7278378-CDS-M-pyrifera_M_contig9769:3625..3749Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig9769 3626..3749 +
1692278240.9022477-CDS-M-pyrifera_M_contig9769:3625..37491692278240.9022477-CDS-M-pyrifera_M_contig9769:3625..3749Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig9769 3626..3749 +
1622816893.7389262-CDS-M-pyrifera_M_contig9769:4538..46711622816893.7389262-CDS-M-pyrifera_M_contig9769:4538..4671Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig9769 4539..4671 +
1692278240.910564-CDS-M-pyrifera_M_contig9769:4538..46711692278240.910564-CDS-M-pyrifera_M_contig9769:4538..4671Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig9769 4539..4671 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig9769.22494.1

>prot_M-pyrifera_M_contig9769.22494.1 ID=prot_M-pyrifera_M_contig9769.22494.1|Name=mRNA_M-pyrifera_M_contig9769.22494.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=278bp
MQALRDDLPSAFVLNAAVCAHSSGEVILQNYNTMFTLSKLAKCSDGILVV
ENETATAVCKKLLRIERPSHADLNKVISNSLVAALIPTAIAMGGAGGGGG
GGGGGWSGGGGGGRASAGETMHLGDKLAHLCPNRDFMFLQTSLVPQIPDR
SREFTINTWEALVGRAHQMHITGAVADIGLDWRKKALDGAGAGVGLNQSV
SSLLTFHGPCDAAAGGAAAAAASPSANIFRSRGLYAGWSPTPFMECRSPL
RLHGHDRSISLLSNSQVRQGVAVSPRW*
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mRNA from alignment at M-pyrifera_M_contig9769:55..4671+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig9769.22494.1 ID=mRNA_M-pyrifera_M_contig9769.22494.1|Name=mRNA_M-pyrifera_M_contig9769.22494.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=4617bp|location=Sequence derived from alignment at M-pyrifera_M_contig9769:55..4671+ (Macrocystis pyrifera P11B4 male)
ATGCAGGCGTTACGAGACGATCTACCTTCAGCGTTTGTGCTCAACGCGGC GGTGTGCGCCCACAGCTCGGGGGAGGTGATTCTGCAGAACTACAACACCA TGTTCACTCTCAGCAAGCTTGCTAAGTGTTCTGACGGGATACTGGTGGGT TTCGATGCTCCGCGGTTTGCGTTCCGCCGTATCCAGCCAGAAATGGGGGT ATATGTGGGTGGTATGCGTACCTGTACGAAGGCGTTTTTATCCCTCCTTC CCTCTTTTAGGTCGGCTGTCACCACGGGGGGCGGTCGAGTTAGATACTTT GCGCGGGATGAAGCACCTCTACTCCGCACAACAGGGATGATCGTATCGCC TAGTGTGTATATGGTGAGGCACCCACGGGGCAGTTAGATAGTCTACCCCC ATTGCTATCTCTGGAAGTGACCACACCAGACAACAAGTCTATTCAGTTGA CGCTGTCATGCGTATGCAAGTCCGTCTCACAAGCGGTTCTTAGTAGGAAG CAGCTCACCCTTCGTTCGACTCGCCCAACACCTCACGGCCCTTCGCGCTT GGTGCAAACCATGCCTGCCTGGTCGGTGAAAACCCGACGTGCTCCGTCCC GACATTGTAGGGATGAGGGTCTATGGTAATACGACTATTAATACCATTCA TGGCATGAGTACATCCCCCCAGCTCTTCCCCTTTCCCCTCCCTTCCTCCC CCCTCTACCCCCTCCCCGGCTCCGTCCATATCCTATCCTATTCAATCCGA TCCGATCCAACCCCATCCCGCCGTCCAAGGTGGTTGAAAACGAAACGGCC ACGGCGGTGTGCAAAATTCTGCTTGATATTGAACCTTTCCCAACGGTCCC GGCATTATAGGGATGCAAGGGTCTATGGCCACGCGACTACAGCCATGCAT GAGAATGAGTACCCCCCCCTCCCCCCACCCCAGCCCCCCTTCCCTCTCCC CCAAAATACCCCCCCCCCCTACCCCCCTCCCCACCCCGACTACGGCCATG CATGACATGAGTACACCCCTCCCCACCCGCCGCTTCCCCCCCCCCAATCC CACCCAATTTAAATCCCGCGGTCCAAGGTGGTGGAAAACGAAACGGCAAC AGCGGTGTGCAAAAAGCTTCTCCGGATCGAACGCCCCTCCCACGCGGACC TCAACAAAGTCATTAGCAACAGCCTTGTAGCGGCTCTCATTCCGACTGCG ATAGCGATGGGGGGGGCAGGGGGAGGTGGTGGTGGTGGTGGTGGTGGTTG GAGTGGAGGAGGCGGTGGTGGGAGGGCGAGCGCCGGGGAGACGATGCACC TGGGGGACAAGCTGGCTCACCTGTGCCCCAACAGGGATTTCATGTTTTTG CAGACGTCTCTGGTGCCGCAGGTGAGATTGCTTTGGCGAGCCATGCTACC CCTACGGGAGGGGGTCGGGTACCTTCCTTTTTTATGGGGTCAACTCAACT CGCCCGGAAGATAATCTATACGTCGTACCTCGACCCATACACCGATGTCG ATTGTCAAAAAAAGAAAATGTACGCGCCGCTGCCGGGCGGACGAACAATC TCATTGGCCAGGAAATACCACGAATCAAAATTTTTGTTGTCACATGCCGT CGTCGCGTTAGTTCGCACCACCACTCCGTCCCTGAATGTTCGAGCAGCTT GTGTATTACTATTGAATCGAAAAGTTTCTTATTTTTTCGCACATAGTGGC ACACAGTTTCGGATCGAGGAGGCGTCTCTGATGCCGTCGGCAGGAGAGAC TTCTTACCCGGGGCTACTACCCCCGCACTGATTCGCCGGCAGTCGACGAC GCGGCACCTTTCTCTCCTCCCCCAACCCGGGGCTACTACCCCCGCATTGA TTCGCTGGCAGTCGACGACGCGGCACCTTTCTCCCCTCCCCCAACCCCCG GGGGGGGACACAATTATTTCTCCCCTCCCCCATCCCCGGGGGGGGACACA ATTATTGCATCCCCCCCTTTCTGTTCCGAAATTGCACTACGTATGCAAAA CGATTGGTTGAATAGTTCCTCCGGCTGAGGAGCCCCGTCAGTACTAAAAA GGATCTGCCTATGCCTGACGTTAGGAACCGCGGTCCGTGGTTCATGGCCG ACGCCTGGTGGAGAGGGCTGGAGCTTATCGTGTTTAGATTGGGGTTGGTG GTTTGGTAGTGGTGTTGGGGTTGGGGTTTGGGTTTAGGGTCGGTTCTCAG TGTGTTGGGGTTGGGGGTGGGGTTGGAGTCGGTTGTCAGTGTGTTGGGGT TGGGGTTGGTGTTAGGGTCTGTGTCGAGATCGGGGATGGGGTTAGCTTGT TAGTGGGTTGGTTCTGGTGTTAGTTTTACGGTTAGTGTTACGAATAGCGG GTTTCCGCCAGCGTTAGAGCTGGGGTTGGGGTTGGGGTTGGGGTCAGTAG ATCGAGATTGGGTTAGCGTTAGGCTCGGGATTGGGGTTAGTGTTGATTTC AGTGTTGGTGTTGGTGTTAGGGTAGCTTTCACCGCGCAGCTCTTGTTCTT ATCGTCATGGCGCTCTCTTCGCTCATGTTTCGACCCCTCAGATACCGGAC AGGTCTAGGGAATTCACCATCAACACCTGGGAGGCGTTAGTGGGGAGGGC GCACCAGATGCACATAACCGGGGCCGTCGCTGACATCGGCTTGGACTGGC GCAAGAAAGCTTTGGATGGGGCCGGGGCAGGTGCAAGTGCTAGCTACTAA TAACAAACAAGCGAAAACATAGCACACACAGCAAAATACATGTATGAAAG TAACAGAAACTAGAGATCATTACTGCATGCTTCAGTCTATCTGAAACAGG CGACGTGATCGCAGCCCCCCCCCCCCCACGGGCAGAGCCTAGAGCAAAGA ATTTGTCGTGCCGAAGTACCAGCGTACATCGGGGCAGATATACAGTATTG CCCCCACGAACGATGAACAACCTTATCGCGAACGTTAGGCTCACCTTTTC GAGGACGCTAATAAACTTGGATTGAGAAATCGTGCTTAGCGGCGCGCACT GCTCTAAACCCCACCAGTCTGTAAAAAAAAAGTATCGGTACACGTACAAC TTTTTTTGGACTGTATAGAAATAAGTACAAGCAACTTTTGAAAGACGCCG TAATGAGGTGAAACAGGTGAGTTACGGGCTAAAAAATAGTACAGGACGCA TGTTGGCGGGGGGGGGGGCAGGGGGGGGGGTAAAAAAATTCCCGGGATGG CCAGGGGACGCCTGGATACCATCCCCGTTTTTTTTGCATAGTTGTCACGG TACCTGTAATAGCCTATGCTCAATATTGCTCAAGGTCGGTGTCACAATAC GGCCAGGTGTTTCTTGTTGGCAGGCCCATACCGTATTAAGGTAATATGCA CGAGCATACAACTTGCTGAGGTACTGCCGCAGCTGTCAAGGCTCGTACCG GTTACGACTCGTAGCGCTGTTGTTGGCATGTTTCTCTTTATGAACTCCTT TTAACCTCTCACTTCAGTGCACTTTGATTTTTTTTTTTTTTCTCTGTGTT TCCTCTCGCGCGCCGCCGCCGCCGCCGCCGCGGCGATGCCATGGAATGAC CCGATCGCACGGCGATGACAGGTGTCGGCCTCAACCAATCGGTTTCATCG CTGCTGACGTTTCACGGACCCTGCGACGCCGCCGCTGGCGGAGCAGCAGC AGCAGCAGCTTCTCCCTCGGCGAACATATTCCGCAGCCGAGGATTGTAAG GCTCAAAATACCGAACACCTCGGACCGGTCATCGATTCCCACTTGGAATA TGAGAGCGCGTAGTAGCATAAAAGCGGGAATAGTTGTCGTACGGTGTCTT TGCCGTACAGCCACATGGCTCCCCACATTGTAGTCTGAGCTCTAACTTCC GTTTTCACCCCCCAACTTGATTGACAGTGAGGCGCCGTAATCGGCAGGTT TCTGTCTCGTGTTTTTCCCGTATCAAGTTCCATCGTGGTTGTCAGGGTAA TAACTACAGTAGTACTTATAGCTCGTTTCAACGTGCGGACTGGTGTTTCC GTGCTACGATAAGCACAGACATCTGTGTGTCGGAGGGGGGACTTGCTTCG GTATGTTGCTTCCGTGGTTCTTGTTTTTTTTATCGCACAACGCGCCAGTC CCGTCTTCCTACTGTATCTCTCTTGTGTATGATGGCGCCGAGAGACCGGT CTTTTTGAGCTCTCTCTCTCTATCTCGCTCTTTCTCTCGCTCTCCCTCTT TCTCTCTCTCCCGCTCAAGCATATTATTTTCGTCCGATAGCAGTCACTGC CGATCACCCAATAGCACACAGCTCCGCAAAGCAAGCGCACCACCCCACGC GCGGCAAGCTAACTGCAAGGATACTAATCTACCCCCTCTCCCCCGGCCCT GCCTCTGTCCCCCTCCTTACTATATCGTGCGCCAGATACGCACCACCCCA CACGCGGTCGTTCAGCTGCGGGGATGTTAACCCCCCCCATCTCCCCTCCT CCGTGTGCCCCCTCTTGACTCTGTCGTGCGTCAGATATGCAGGTTGGTCG CCGACACCGTTCATGGAGTGTCGCTCGCCGCTGCGGCTTCACGGACACGA CCGATCGATCTCCCTCCTTTCTAACTCCCAGGTTCGACAAGGAGTTGCGG TATCACCCAGGTGGTAA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig9769:55..4671+

>mRNA_M-pyrifera_M_contig9769.22494.1 ID=mRNA_M-pyrifera_M_contig9769.22494.1|Name=mRNA_M-pyrifera_M_contig9769.22494.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1668bp|location=Sequence derived from alignment at M-pyrifera_M_contig9769:55..4671+ (Macrocystis pyrifera P11B4 male)
ATGCAGGCGTTACGAGACGATCTACCTTCAGCGTTTGTGCTCAACGCGGC
GGTGTGCGCCCACAGCTCGGGGGAGGTGATTCTGCAGAACTACAACACCA
TGTTCACTCTCAGCAAGCTTGCTAAGTGTTCTGACGGGATACTGATGCAG
GCGTTACGAGACGATCTACCTTCAGCGTTTGTGCTCAACGCGGCGGTGTG
CGCCCACAGCTCGGGGGAGGTGATTCTGCAGAACTACAACACCATGTTCA
CTCTCAGCAAGCTTGCTAAGTGTTCTGACGGGATACTGGTGGTGGAAAAC
GAAACGGCAACAGCGGTGTGCAAAAAGCTTCTCCGGATCGAACGCCCCTC
CCACGCGGACCTCAACAAAGTCATTAGCAACAGCCTTGTAGCGGCTCTCA
TTCCGACTGCGATAGCGATGGGGGGGGCAGGGGGAGGTGGTGGTGGTGGT
GGTGGTGGTTGGAGTGGAGGAGGCGGTGGTGGGAGGGCGAGCGCCGGGGA
GACGATGCACCTGGGGGACAAGCTGGCTCACCTGTGCCCCAACAGGGATT
TCATGTTTTTGCAGACGTCTCTGGTGCCGCAGGTGGTGGAAAACGAAACG
GCAACAGCGGTGTGCAAAAAGCTTCTCCGGATCGAACGCCCCTCCCACGC
GGACCTCAACAAAGTCATTAGCAACAGCCTTGTAGCGGCTCTCATTCCGA
CTGCGATAGCGATGGGGGGGGCAGGGGGAGGTGGTGGTGGTGGTGGTGGT
GGTTGGAGTGGAGGAGGCGGTGGTGGGAGGGCGAGCGCCGGGGAGACGAT
GCACCTGGGGGACAAGCTGGCTCACCTGTGCCCCAACAGGGATTTCATGT
TTTTGCAGACGTCTCTGGTGCCGCAGATACCGGACAGGTCTAGGGAATTC
ACCATCAACACCTGGGAGGCGTTAGTGGGGAGGGCGCACCAGATGCACAT
AACCGGGGCCGTCGCTGACATCGGCTTGGACTGGCGCAAGAAAGCTTTGG
ATGGGGCCGGGGCAGATACCGGACAGGTCTAGGGAATTCACCATCAACAC
CTGGGAGGCGTTAGTGGGGAGGGCGCACCAGATGCACATAACCGGGGCCG
TCGCTGACATCGGCTTGGACTGGCGCAAGAAAGCTTTGGATGGGGCCGGG
GCAGGTGTCGGCCTCAACCAATCGGTTTCATCGCTGCTGACGTTTCACGG
ACCCTGCGACGCCGCCGCTGGCGGAGCAGCAGCAGCAGCAGCTTCTCCCT
CGGCGAACATATTCCGCAGCCGAGGATTGTGTCGGCCTCAACCAATCGGT
TTCATCGCTGCTGACGTTTCACGGACCCTGCGACGCCGCCGCTGGCGGAG
CAGCAGCAGCAGCAGCTTCTCCCTCGGCGAACATATTCCGCAGCCGAGGA
TTATATGCAGGTTGGTCGCCGACACCGTTCATGGAGTGTCGCTCGCCGCT
GCGGCTTCACGGACACGACCGATCGATCTCCCTCCTTTCTAACTCCCAGG
TTCGACAAGGAGTTGCGGTATCACCCAGGTGGTAAATATGCAGGTTGGTC
GCCGACACCGTTCATGGAGTGTCGCTCGCCGCTGCGGCTTCACGGACACG
ACCGATCGATCTCCCTCCTTTCTAACTCCCAGGTTCGACAAGGAGTTGCG
GTATCACCCAGGTGGTAA
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