mRNA_M-pyrifera_M_contig97600.22483.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig97600.22483.1 vs. uniprot
Match: A0A7S4I2J4_9EUKA (Hypothetical protein n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4I2J4_9EUKA) HSP 1 Score: 143 bits (360), Expect = 1.200e-41 Identity = 75/127 (59.06%), Postives = 94/127 (74.02%), Query Frame = 1 Query: 1 MSQELTWQLIKKHNSFLIRRDGVLFSTEPNNLTNKNSFKYSGLANNSTVGVEINTEG-----KGCVLVTKKKSSAARRSPASAHNRT-FELTGSSRVARTIKAETQGKNYRGDLTSAALARWSKISQ 363 MS ELTWQLI+KHN F+ RRDG F++EPNNL NK++FK+SGLAN VGV+ N + KGCVL TK + S+ RR PA NRT F+ + RVA+ IK+ETQGK YR DLT+AALARWS+I++ Sbjct: 1 MSSELTWQLIRKHNCFITRRDGATFTSEPNNLMNKHAFKWSGLANKDAVGVDFNRDANGNVTKGCVLSTKSRKSSLRRQPAKTWNRTTFKTSDFRRVAKAIKSETQGKYYRRDLTNAALARWSQINR 127
BLAST of mRNA_M-pyrifera_M_contig97600.22483.1 vs. uniprot
Match: A0A1Y1XV27_9FUNG (Ribosomal protein L28 n=1 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1XV27_9FUNG) HSP 1 Score: 112 bits (280), Expect = 2.190e-29 Identity = 63/119 (52.94%), Postives = 78/119 (65.55%), Query Frame = 1 Query: 1 MSQELTWQLIKKHNSFLIRRDGVLFSTEPNNLTNKNSFKYSGLANNSTVGVEINTEGKGCVLVTKKKSSAARRSPASAHNRTFELTGSSRVARTIKAETQGKNYRGDLTSAALARWSKI 357 MS +LTW L+K ++SFL++R+GV F+TEPNNLTN NSFKYSGLANN VGV GKG VL TKK+S +A + P+ + +T S R A+ I T YR DL AAL R S I Sbjct: 1 MSADLTWLLVKDNSSFLVKRNGVQFTTEPNNLTNLNSFKYSGLANNKVVGVTAAPSGKGVVLTTKKQSVSATK-PSKSFQKTSVSGSSRRAAKVIVNSTARSGYRADLRKAALGRLSAI 118
BLAST of mRNA_M-pyrifera_M_contig97600.22483.1 vs. uniprot
Match: A0A1Y1Z5T5_9FUNG (Putative ribosomal protein L28 n=1 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1Z5T5_9FUNG) HSP 1 Score: 110 bits (275), Expect = 1.250e-28 Identity = 62/119 (52.10%), Postives = 77/119 (64.71%), Query Frame = 1 Query: 1 MSQELTWQLIKKHNSFLIRRDGVLFSTEPNNLTNKNSFKYSGLANNSTVGVEINTEGKGCVLVTKKKSSAARRSPASAHNRTFELTGSSRVARTIKAETQGKNYRGDLTSAALARWSKI 357 MS +LTW L+K ++SFL++R GV F+TEPNNLTN NSFKYSGLAN VGVE N GKG VL TKK+S ++ + P + + S R A++I T YR DL AAL R S I Sbjct: 1 MSADLTWLLVKDNSSFLVKRSGVQFTTEPNNLTNLNSFKYSGLANAKVVGVEANASGKGVVLTTKKQSVSSGK-PGKSFQKVAISGSSRRAAKSIVNATARSGYRADLRKAALGRLSAI 118
BLAST of mRNA_M-pyrifera_M_contig97600.22483.1 vs. uniprot
Match: A0A1Y1X9A3_9FUNG (60S ribosomal protein l28 n=1 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1X9A3_9FUNG) HSP 1 Score: 110 bits (274), Expect = 1.780e-28 Identity = 62/119 (52.10%), Postives = 76/119 (63.87%), Query Frame = 1 Query: 1 MSQELTWQLIKKHNSFLIRRDGVLFSTEPNNLTNKNSFKYSGLANNSTVGVEINTEGKGCVLVTKKKSSAARRSPASAHNRTFELTGSSRVARTIKAETQGKNYRGDLTSAALARWSKI 357 MS +LTW L+K ++SFL++R+GV F+TEPNNLTN NSFKYSGLAN G+ N GKG VL TKK++ +A + PA + R S R AR I T YR DL AAL R S I Sbjct: 1 MSADLTWLLVKDNSSFLVKRNGVQFTTEPNNLTNLNSFKYSGLANTKAFGISANPSGKGVVLSTKKQAVSASK-PAKSSQRVAISGSSRRAARAIVNATARSGYRADLRKAALGRLSAI 118
BLAST of mRNA_M-pyrifera_M_contig97600.22483.1 vs. uniprot
Match: A0A1D1ZMD1_9ARAE (60S ribosomal protein L28 n=1 Tax=Anthurium amnicola TaxID=1678845 RepID=A0A1D1ZMD1_9ARAE) HSP 1 Score: 101 bits (252), Expect = 4.470e-25 Identity = 56/121 (46.28%), Postives = 76/121 (62.81%), Query Frame = 1 Query: 1 MSQELTWQLIKKHNSFLIRRDGVLFSTEPNNLTNKNSFKYSGLANNSTVGVEINTEGKGCVLVTKKKSSAARRSPASAHNRTFELTGSSRVARTIKAETQGKNYRGDLTSAALARWSKISQ 363 MS +L WQL+K +SFL++R+G F++EPNNLTN NSFKYSGLAN +G+ +G +VTKK ++ A PA A N+ G R A++ A+ +YR DL AALAR S + Q Sbjct: 1 MSDDLIWQLLKSRSSFLVKRNGAEFNSEPNNLTNLNSFKYSGLANKKAIGITTGPNNRGVTVVTKK-TNVAYYKPAKAINKVTLSKGIRRSAKSFTAQFTKSHYRPDLRKAALARISAVYQ 120
BLAST of mRNA_M-pyrifera_M_contig97600.22483.1 vs. uniprot
Match: A9UDT8_9BILA (60S ribosomal protein L28 (Fragment) n=1 Tax=Flustra foliacea TaxID=478208 RepID=A9UDT8_9BILA) HSP 1 Score: 100 bits (248), Expect = 9.790e-25 Identity = 57/120 (47.50%), Postives = 75/120 (62.50%), Query Frame = 1 Query: 1 MSQELTWQLIKKHNSFLIRRDGVLFSTEPNNLTNKNSFKYSGLANNSTVGVEINTEGKGCVLVTKKKSSAARRSPASAHNR-TFELTGSSRVARTIKAETQGKNYRGDLTSAALARWSKI 357 MS L W +I+K++SFL++R+ VL++ EPNNL NSF+++GL TVGVE N +GKG LVTK K S PA +NR + S R +TI +G+ YR DL SAAL R S I Sbjct: 1 MSSALQWSIIRKNSSFLLKRNDVLYTKEPNNLRGINSFRFNGLVQEKTVGVEANADGKGVTLVTKNKKS---NQPAKNYNRIALKKNNSRRAFKTIMKTLKGQGYRKDLQSAALRRASTI 117
BLAST of mRNA_M-pyrifera_M_contig97600.22483.1 vs. uniprot
Match: A0A1Y1YJU1_9FUNG (Ribosomal protein L28e n=1 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1YJU1_9FUNG) HSP 1 Score: 99.8 bits (247), Expect = 1.390e-24 Identity = 58/108 (53.70%), Postives = 72/108 (66.67%), Query Frame = 1 Query: 1 MSQELTWQLIKKHNSFLIRRDGVLFSTEPNNLTNKNSFKYSGLANNSTVGVEINTEGKGCVLVTKKKSSAARRSPASAHNRTFELTGSSRVARTIKAETQGKNYRGDL 324 MS +LTW L+K ++SFL++R+GV F+TEPNNLTN NSFKYSGLANN VGV + GKG VL TKK+S +A + PA A N+ S R A+ I YR DL Sbjct: 1 MSADLTWLLVKDNSSFLVKRNGVQFTTEPNNLTNLNSFKYSGLANNKVVGVAAS--GKGVVLTTKKQSVSAAK-PAKAFNKVTISGSSRRSAKVIANSIARSGYRADL 105
BLAST of mRNA_M-pyrifera_M_contig97600.22483.1 vs. uniprot
Match: A0A7S0L8E0_9EUKA (Hypothetical protein (Fragment) n=2 Tax=Eukaryota TaxID=2759 RepID=A0A7S0L8E0_9EUKA) HSP 1 Score: 99.4 bits (246), Expect = 2.670e-24 Identity = 56/122 (45.90%), Postives = 77/122 (63.11%), Query Frame = 1 Query: 1 MSQELTWQLIKKHNSFLIR-RDGVLFSTEPNNLTNKNSFKYSGLANNSTVGVEINTEGKGCVLVTKKKSSAARRSPASAHNRTFELTGSSRVARTIKAETQGKNYRGDLTSAALARWSKISQ 363 MS L WQ+I+ ++ FL++ R+GV FS+EPNNLT NSFK+SGLAN+ VGV N +G G L K K + + PA A + R A+TI T G +YR DL +AALAR++ I++ Sbjct: 1 MSASLVWQIIRNNSCFLVKQRNGVSFSSEPNNLTKINSFKFSGLANDRVVGVNANADG-GVTLAVKSKKKSKTQKPAKAFTKIVLKKDFRRTAKTIINNTSGNHYRSDLKAAALARYTAIAK 121
BLAST of mRNA_M-pyrifera_M_contig97600.22483.1 vs. uniprot
Match: A0A397TK07_9GLOM (Ribosomal L28e/Mak16 n=1 Tax=Glomus cerebriforme TaxID=658196 RepID=A0A397TK07_9GLOM) HSP 1 Score: 99.0 bits (245), Expect = 5.240e-24 Identity = 58/122 (47.54%), Postives = 79/122 (64.75%), Query Frame = 1 Query: 1 MSQELTWQLIKKHNSFLIRRDGVLFSTEPNNLTNKNSFKYSGLANNSTVGVEIN-TEGKGCVLVTKKKSSAARRSPASAHNRTFELTGSSRVARTIKAETQGKNYRGDLTSAALARWSKISQ 363 MS +LTW LIK +SFL++R+G F++EPNNLTN NSFKYSGLAN +GV+ T KG +VTKK + A+ + PA + N+ G + A++ ++ +YR DL AALAR S I Q Sbjct: 1 MSDDLTWLLIKNRSSFLVKRNGAEFNSEPNNLTNLNSFKYSGLANKKAIGVKDGPTNYKGVTVVTKKTNVASYK-PAKSINKVILTKGVRKSAKSFTSQFTKSHYRPDLRKAALARISAIYQ 121
BLAST of mRNA_M-pyrifera_M_contig97600.22483.1 vs. uniprot
Match: A0A433D7L2_9FUNG (Ribosomal protein L28e n=1 Tax=Jimgerdemannia flammicorona TaxID=994334 RepID=A0A433D7L2_9FUNG) HSP 1 Score: 98.2 bits (243), Expect = 1.080e-23 Identity = 58/128 (45.31%), Postives = 78/128 (60.94%), Query Frame = 1 Query: 1 MSQELTWQLIKKHNSFLIRRDGVLFSTEPNNLTNKNSFKYSGLANNSTVGVEINTEGKGCVLVTKKKSSAARRSPASAHN---RTFELT---GSSRVARTIKAETQGKNYRGDLTSAALARWSKISQI 366 MS +L W L+K +N++L++R GV FS+EP NLTN N+FKYSGLANN TVGV GKG L+TKK+ SAHN R ++T GS R A ++ YR DL A++A +++S I Sbjct: 1 MSADLVWSLVKNNNAYLVKRPGVQFSSEPGNLTNLNTFKYSGLANNKTVGVVPAVSGKGIELITKKQK-------LSAHNVNKRVNKITIAKGSRRTALSVANIVARNGYRPDLRQASIAALARVSAI 121 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig97600.22483.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig97600.22483.1 >prot_M-pyrifera_M_contig97600.22483.1 ID=prot_M-pyrifera_M_contig97600.22483.1|Name=mRNA_M-pyrifera_M_contig97600.22483.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=126bp MSQELTWQLIKKHNSFLIRRDGVLFSTEPNNLTNKNSFKYSGLANNSTVGback to top mRNA from alignment at M-pyrifera_M_contig97600:82..565+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig97600.22483.1 ID=mRNA_M-pyrifera_M_contig97600.22483.1|Name=mRNA_M-pyrifera_M_contig97600.22483.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=484bp|location=Sequence derived from alignment at M-pyrifera_M_contig97600:82..565+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig97600:82..565+ >mRNA_M-pyrifera_M_contig97600.22483.1 ID=mRNA_M-pyrifera_M_contig97600.22483.1|Name=mRNA_M-pyrifera_M_contig97600.22483.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=756bp|location=Sequence derived from alignment at M-pyrifera_M_contig97600:82..565+ (Macrocystis pyrifera P11B4 male)back to top |