mRNA_M-pyrifera_M_contig97530.22469.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig97530.22469.1 vs. uniprot
Match: A0A7S1WYB5_ALECA (Hypothetical protein (Fragment) n=1 Tax=Alexandrium catenella TaxID=2925 RepID=A0A7S1WYB5_ALECA) HSP 1 Score: 56.2 bits (134), Expect = 1.220e-7 Identity = 27/61 (44.26%), Postives = 39/61 (63.93%), Query Frame = 1 Query: 1 MAAGDDSDVEEEVWPELVCGLTMGIMVEPVTLSCGHTFEKSALRRALLGGTSVCPLCRAPV 183 MA+ EEV PE C + M ++++PVT+SCGHTF + L ++L G +C +CRAPV Sbjct: 11 MASAQGDAGSEEVPPEFECTICMKLLLDPVTVSCGHTFCRVCLEQSL-GYRGLCAVCRAPV 70
BLAST of mRNA_M-pyrifera_M_contig97530.22469.1 vs. uniprot
Match: A0A8J2B3Y6_9DINO (Hypothetical protein n=1 Tax=Amoebophrya sp. A25 TaxID=1410381 RepID=A0A8J2B3Y6_9DINO) HSP 1 Score: 54.3 bits (129), Expect = 5.910e-7 Identity = 29/68 (42.65%), Postives = 41/68 (60.29%), Query Frame = 1 Query: 1 MAA--GDDSDV-----EEEVWPELVCGLTMGIMVEPVTLSCGHTFEKSALRRALLGGTSVCPLCRAPV 183 MAA GDD DV + PE C L + ++++PV++SCGHTF +S + +L S CPLCR P+ Sbjct: 1 MAASPGDDPDVLAAGGPSGISPEFECALCLRLLLDPVSVSCGHTFCRSCIETSL-DHRSACPLCRQPI 67
BLAST of mRNA_M-pyrifera_M_contig97530.22469.1 vs. uniprot
Match: A0A2I0AMS9_9ASPA (RING-type E3 ubiquitin transferase n=1 Tax=Apostasia shenzhenica TaxID=1088818 RepID=A0A2I0AMS9_9ASPA) HSP 1 Score: 53.9 bits (128), Expect = 8.190e-7 Identity = 25/60 (41.67%), Postives = 35/60 (58.33%), Query Frame = 1 Query: 13 DDSDVEEEVWPELVCGLTMGIMVEPVTLSCGHTFEKSALRRALLGGTSVCPLCRAPVHSS 192 DD D++ P C LT +MV+PV+ SCGH FE+ AL + G C +C AP+ S+ Sbjct: 189 DDGDIKPS--PFFYCPLTCDLMVDPVSGSCGHCFERRALEASFQEGNRFCTICNAPLTST 246
BLAST of mRNA_M-pyrifera_M_contig97530.22469.1 vs. uniprot
Match: A0A6T1BC94_9DINO (Hypothetical protein n=1 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A6T1BC94_9DINO) HSP 1 Score: 53.1 bits (126), Expect = 1.500e-6 Identity = 24/51 (47.06%), Postives = 36/51 (70.59%), Query Frame = 1 Query: 31 EEVWPELVCGLTMGIMVEPVTLSCGHTFEKSALRRALLGGTSVCPLCRAPV 183 E+V PE C + M +M++PVT+SCGHTF + L ++L G +C +CR+PV Sbjct: 9 EDVPPEFECTICMKLMLDPVTVSCGHTFCRVCLEQSL-GYRGLCAVCRSPV 58
BLAST of mRNA_M-pyrifera_M_contig97530.22469.1 vs. uniprot
Match: A0A8J1Z118_9DINO (Hypothetical protein n=1 Tax=Amoebophrya sp. A120 TaxID=2202890 RepID=A0A8J1Z118_9DINO) HSP 1 Score: 52.8 bits (125), Expect = 2.060e-6 Identity = 24/51 (47.06%), Postives = 34/51 (66.67%), Query Frame = 1 Query: 31 EEVWPELVCGLTMGIMVEPVTLSCGHTFEKSALRRALLGGTSVCPLCRAPV 183 EEV E C L + +++EPV++SCGHTF +S + A L + CPLCR P+ Sbjct: 3 EEVSSEFECALCLRLLLEPVSVSCGHTFCRSCIE-ASLDHRAACPLCRQPI 52
BLAST of mRNA_M-pyrifera_M_contig97530.22469.1 vs. uniprot
Match: A0A812KBY1_9DINO (LONRF3 protein n=1 Tax=Symbiodinium natans TaxID=878477 RepID=A0A812KBY1_9DINO) HSP 1 Score: 52.4 bits (124), Expect = 2.790e-6 Identity = 23/52 (44.23%), Postives = 37/52 (71.15%), Query Frame = 1 Query: 28 EEEVWPELVCGLTMGIMVEPVTLSCGHTFEKSALRRALLGGTSVCPLCRAPV 183 +E + P L C + M +++EPV++ CGHTF ++ L +AL G ++C +CRAPV Sbjct: 3 DESIPPHLECAICMKLLLEPVSVPCGHTFCQTCLDQAL-GYRNLCAVCRAPV 53
BLAST of mRNA_M-pyrifera_M_contig97530.22469.1 vs. uniprot
Match: A0A812WVL6_9DINO (LONRF3 protein n=1 Tax=Symbiodinium sp. CCMP2592 TaxID=631055 RepID=A0A812WVL6_9DINO) HSP 1 Score: 52.4 bits (124), Expect = 2.840e-6 Identity = 22/52 (42.31%), Postives = 37/52 (71.15%), Query Frame = 1 Query: 28 EEEVWPELVCGLTMGIMVEPVTLSCGHTFEKSALRRALLGGTSVCPLCRAPV 183 +E + P L C + M +++EPV++ CGHTF ++ L +A+ G ++C +CRAPV Sbjct: 216 DESIPPHLECAICMKLLLEPVSVPCGHTFCQTCLEQAM-GYRNLCAVCRAPV 266
BLAST of mRNA_M-pyrifera_M_contig97530.22469.1 vs. uniprot
Match: A0A6A5CAJ5_NAEFO (Uncharacterized protein n=1 Tax=Naegleria fowleri TaxID=5763 RepID=A0A6A5CAJ5_NAEFO) HSP 1 Score: 51.6 bits (122), Expect = 5.320e-6 Identity = 27/57 (47.37%), Postives = 34/57 (59.65%), Query Frame = 1 Query: 16 DSDVEEEVWPELVCGLTMGIMVEPVTLSCGHTFEKSALRRALLGGTSVCPLCRAPVH 186 D DVEE L C L + EPVTLSCGHTF++S + R + + CPLCR +H Sbjct: 289 DEDVEE-----LECPLCYRVFYEPVTLSCGHTFDRSCICR-VHDYSDKCPLCRQTIH 339
BLAST of mRNA_M-pyrifera_M_contig97530.22469.1 vs. uniprot
Match: UPI00145B6409 (E3 ubiquitin-protein ligase TRIM21-like n=1 Tax=Periophthalmus magnuspinnatus TaxID=409849 RepID=UPI00145B6409) HSP 1 Score: 50.8 bits (120), Expect = 9.900e-6 Identity = 23/42 (54.76%), Postives = 28/42 (66.67%), Query Frame = 1 Query: 46 ELVCGLTMGIMVEPVTLSCGHTFEKSALRRALLGGTSVCPLC 171 +L C + M + VEPVT SCGH+F + L RAL TS CPLC Sbjct: 20 QLNCSICMEMFVEPVTTSCGHSFCRRCLDRALRLNTSACPLC 61
BLAST of mRNA_M-pyrifera_M_contig97530.22469.1 vs. uniprot
Match: UPI001CFCF708 (uncharacterized protein n=1 Tax=Naegleria lovaniensis TaxID=51637 RepID=UPI001CFCF708) HSP 1 Score: 50.4 bits (119), Expect = 1.360e-5 Identity = 25/55 (45.45%), Postives = 34/55 (61.82%), Query Frame = 1 Query: 22 DVEEEVWPELVCGLTMGIMVEPVTLSCGHTFEKSALRRALLGGTSVCPLCRAPVH 186 D E++ EL C L + EPVTLSCGHTF++S + R + + CPLCR +H Sbjct: 302 DFNEDI-EELECPLCYRVFYEPVTLSCGHTFDRSCICR-VHDYSDKCPLCRQTIH 354 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig97530.22469.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 20
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig97530.22469.1 >prot_M-pyrifera_M_contig97530.22469.1 ID=prot_M-pyrifera_M_contig97530.22469.1|Name=mRNA_M-pyrifera_M_contig97530.22469.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=64bp MAAGDDSDVEEEVWPELVCGLTMGIMVEPVTLSCGHTFEKSALRRALLGGback to top mRNA from alignment at M-pyrifera_M_contig97530:511..702+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig97530.22469.1 ID=mRNA_M-pyrifera_M_contig97530.22469.1|Name=mRNA_M-pyrifera_M_contig97530.22469.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=192bp|location=Sequence derived from alignment at M-pyrifera_M_contig97530:511..702+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig97530:511..702+ >mRNA_M-pyrifera_M_contig97530.22469.1 ID=mRNA_M-pyrifera_M_contig97530.22469.1|Name=mRNA_M-pyrifera_M_contig97530.22469.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=384bp|location=Sequence derived from alignment at M-pyrifera_M_contig97530:511..702+ (Macrocystis pyrifera P11B4 male)back to top |