mRNA_M-pyrifera_M_contig97500.22457.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig97500.22457.1 vs. uniprot
Match: A0A7V9NRF9_9ACTN (Glycosyltransferase family 4 protein n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A7V9NRF9_9ACTN) HSP 1 Score: 75.1 bits (183), Expect = 2.760e-14 Identity = 37/63 (58.73%), Postives = 45/63 (71.43%), Query Frame = 1 Query: 25 GFRPAGEIVQAMSESDVALLPYRIASQSGVVVLAQAMGTVPIVHAVGGLPEQVRDGVDGLVLP 213 GF G + + +S LLPYRIASQSG VVLAQA+G+VP+ AVGGLPEQ+ DG G +LP Sbjct: 234 GFLDPGALRSTVEQSSATLLPYRIASQSGAVVLAQALGSVPVASAVGGLPEQISDGETGRLLP 296
BLAST of mRNA_M-pyrifera_M_contig97500.22457.1 vs. uniprot
Match: A0A7C4TF15_9ACTN (Glyco_trans_4-like_N domain-containing protein n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A7C4TF15_9ACTN) HSP 1 Score: 70.9 bits (172), Expect = 9.630e-13 Identity = 32/65 (49.23%), Postives = 48/65 (73.85%), Query Frame = 1 Query: 19 LSGFRPAGEIVQAMSESDVALLPYRIASQSGVVVLAQAMGTVPIVHAVGGLPEQVRDGVDGLVLP 213 L G+ P G ++ A++ ++V L PY A+QSG VVLA +G+VP+ AVGG+PEQ+ GVDG+++P Sbjct: 232 LPGYLPPGALLGAVAATEVTLAPYAHATQSGAVVLAHVLGSVPVASAVGGIPEQIDGGVDGILVP 296
BLAST of mRNA_M-pyrifera_M_contig97500.22457.1 vs. uniprot
Match: A0A848EHE6_9PROT (Glycosyltransferase family 4 protein n=3 Tax=Roseomonas TaxID=125216 RepID=A0A848EHE6_9PROT) HSP 1 Score: 64.7 bits (156), Expect = 1.720e-10 Identity = 35/69 (50.72%), Postives = 46/69 (66.67%), Query Frame = 1 Query: 1 MTNATTLSGFRPAGEIVQAMSESDVALLPYRIASQSGVVVLAQAMGTVPIVHAVGGLPEQVRDGVDGLV 207 + T G+ ++V ++ +D A+LPYR ASQSGVV +A A+G IV VGGL EQVRDG+DGLV Sbjct: 246 LPGVTLRPGWLSEADLVGLLAAADAAVLPYREASQSGVVPVALALGVPAIVTPVGGLAEQVRDGLDGLV 314
BLAST of mRNA_M-pyrifera_M_contig97500.22457.1 vs. uniprot
Match: A0A4D8RKW3_AZOBR (Glycosyltransferase n=5 Tax=Azospirillum TaxID=191 RepID=A0A4D8RKW3_AZOBR) HSP 1 Score: 60.5 bits (145), Expect = 5.520e-9 Identity = 33/69 (47.83%), Postives = 44/69 (63.77%), Query Frame = 1 Query: 1 MTNATTLSGFRPAGEIVQAMSESDVALLPYRIASQSGVVVLAQAMGTVPIVHAVGGLPEQVRDGVDGLV 207 + N T + + P EI M ++D+ +LPYR ASQSGV+ +AQ+ G +V VGGL EQV DG GLV Sbjct: 260 LPNITLDNRYIPENEIPAIMGKADLVVLPYREASQSGVIAMAQSCGVPVVVTPVGGLVEQVIDGETGLV 328
BLAST of mRNA_M-pyrifera_M_contig97500.22457.1 vs. uniprot
Match: UPI001BAB02C4 (glycosyltransferase family 4 protein n=1 Tax=Roseomonas terrae TaxID=424799 RepID=UPI001BAB02C4) HSP 1 Score: 60.1 bits (144), Expect = 7.390e-9 Identity = 29/62 (46.77%), Postives = 42/62 (67.74%), Query Frame = 1 Query: 22 SGFRPAGEIVQAMSESDVALLPYRIASQSGVVVLAQAMGTVPIVHAVGGLPEQVRDGVDGLV 207 +G+ P E+ + ++ +D +LPYR ASQSGV LA A G + VGGL EQ++DG+DGL+ Sbjct: 248 AGWLPEAEMARLVASADAVVLPYREASQSGVAPLAHAAGVPVVATPVGGLAEQLQDGIDGLL 309
BLAST of mRNA_M-pyrifera_M_contig97500.22457.1 vs. uniprot
Match: UPI0018DFAF7A (glycosyltransferase family 4 protein n=1 Tax=Roseomonas sp. OP-27 TaxID=2748667 RepID=UPI0018DFAF7A) HSP 1 Score: 58.2 bits (139), Expect = 1.200e-8 Identity = 30/69 (43.48%), Postives = 42/69 (60.87%), Query Frame = 1 Query: 1 MTNATTLSGFRPAGEIVQAMSESDVALLPYRIASQSGVVVLAQAMGTVPIVHAVGGLPEQVRDGVDGLV 207 + T S + E+ ++E+D +LPYR ASQSGV LA +G + VGGL EQVRDG+DG++ Sbjct: 63 LPGVTVESRWLGEAEMAALVAEADAVVLPYREASQSGVAPLAHGLGVPVVATPVGGLAEQVRDGIDGVL 131
BLAST of mRNA_M-pyrifera_M_contig97500.22457.1 vs. uniprot
Match: UPI001E3CA6E5 (glycosyltransferase n=1 Tax=Roseomonas sp. CECT 9278 TaxID=2845823 RepID=UPI001E3CA6E5) HSP 1 Score: 58.9 bits (141), Expect = 1.910e-8 Identity = 30/59 (50.85%), Postives = 40/59 (67.80%), Query Frame = 1 Query: 43 EIVQAMSESDVALLPYRIASQSGVVVLAQAMGTVPIVHAVGGLPEQVRDGVDGLVLPLD 219 E+ ++ + + PYR ASQSG+V LA ++G + AVGGL EQVRDGV GLV+P D Sbjct: 254 EMAPLLASARAVVFPYRQASQSGIVPLALSLGVPAVATAVGGLVEQVRDGVSGLVVPPD 312
BLAST of mRNA_M-pyrifera_M_contig97500.22457.1 vs. uniprot
Match: A0A7Y1ZRX7_9BACT (Glycosyltransferase n=1 Tax=Rhodothermales bacterium TaxID=2306054 RepID=A0A7Y1ZRX7_9BACT) HSP 1 Score: 58.9 bits (141), Expect = 1.930e-8 Identity = 30/71 (42.25%), Postives = 42/71 (59.15%), Query Frame = 1 Query: 7 NATTLSGFRPAGEIVQAMSESDVALLPYRIASQSGVVVLAQAMGTVPIVHAVGGLPEQVRDGVDGLVLPLD 219 + T ++ F P E+ +D +LPYR A+QSGVV +A IV GGLPE V+DG+ G V+P+D Sbjct: 257 HVTIINRFVPDDEVATYFCAADTVVLPYRSATQSGVVQIAMHFDRACIVTDTGGLPEMVQDGITGFVVPVD 327
BLAST of mRNA_M-pyrifera_M_contig97500.22457.1 vs. uniprot
Match: UPI0010C14CA1 (glycosyltransferase family 4 protein n=1 Tax=Roseomonas sp. HF4 TaxID=2562313 RepID=UPI0010C14CA1) HSP 1 Score: 58.5 bits (140), Expect = 2.650e-8 Identity = 31/55 (56.36%), Postives = 38/55 (69.09%), Query Frame = 1 Query: 43 EIVQAMSESDVALLPYRIASQSGVVVLAQAMGTVPIVHAVGGLPEQVRDGVDGLV 207 E+ Q ++ SD +LPY ASQSGV +A AMG +V VGGL EQVRD +DGLV Sbjct: 258 ELPQLIAASDAVVLPYTEASQSGVAPVAHAMGVPVVVTPVGGLVEQVRDDIDGLV 312
BLAST of mRNA_M-pyrifera_M_contig97500.22457.1 vs. uniprot
Match: A0A060BNW9_9CHLB (Glycos_transf_1 (Fragment) n=1 Tax=uncultured Chlorobium sp. TaxID=309171 RepID=A0A060BNW9_9CHLB) HSP 1 Score: 56.2 bits (134), Expect = 2.760e-8 Identity = 29/55 (52.73%), Postives = 36/55 (65.45%), Query Frame = 1 Query: 43 EIVQAMSESDVALLPYRIASQSGVVVLAQAMGTVPIVHAVGGLPEQVRDGVDGLV 207 EI + +D +LPYR ASQSGV +A +G + VGGL EQVRDGVDGL+ Sbjct: 26 EIAALIGGADAVVLPYREASQSGVAPVAHGLGVPVVATPVGGLSEQVRDGVDGLL 80 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig97500.22457.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig97500.22457.1 >prot_M-pyrifera_M_contig97500.22457.1 ID=prot_M-pyrifera_M_contig97500.22457.1|Name=mRNA_M-pyrifera_M_contig97500.22457.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=73bp MTNATTLSGFRPAGEIVQAMSESDVALLPYRIASQSGVVVLAQAMGTVPIback to top mRNA from alignment at M-pyrifera_M_contig97500:276..494- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig97500.22457.1 ID=mRNA_M-pyrifera_M_contig97500.22457.1|Name=mRNA_M-pyrifera_M_contig97500.22457.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=219bp|location=Sequence derived from alignment at M-pyrifera_M_contig97500:276..494- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig97500:276..494- >mRNA_M-pyrifera_M_contig97500.22457.1 ID=mRNA_M-pyrifera_M_contig97500.22457.1|Name=mRNA_M-pyrifera_M_contig97500.22457.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=438bp|location=Sequence derived from alignment at M-pyrifera_M_contig97500:276..494- (Macrocystis pyrifera P11B4 male)back to top |