mRNA_M-pyrifera_M_contig97219.22391.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig97219.22391.1 vs. uniprot
Match: A0A2E7KGD5_9PLAN (Uncharacterized protein n=8 Tax=Gimesia TaxID=1649453 RepID=A0A2E7KGD5_9PLAN) HSP 1 Score: 449 bits (1156), Expect = 2.950e-147 Identity = 231/236 (97.88%), Postives = 233/236 (98.73%), Query Frame = 1 Query: 1 KLWSPLPDSVKQSRNIIISPDASLWLVPWAALSVQGEPLIKSHQLRLVVSGRDLLPSDETASANAPLIVADPDFETKVSAPDQSPAPPAIETRGSAIFKNFSPVPRLKFAAAEAASITPAINQLCGRPPVVLTGKQATEQAVKKASSPEIMVLTTHGIFLPSDNNATTSEFTFDSEPRTELNNPLLRSGLLFAGFNESTSGSDGVLTGAEILETDLEHTDLVVMSACDTALGEINN 708 KLWSPLPDSVKQSRNIIISPDASLWLVPWAALSVQGEPLIKSHQLRLVVSGRDL+PSDETASANAPLIVADPDFETKVSAPDQSPAPPAIETRGSA FKNFSPVPRLKFAAAEAASITPAINQLCGRPPVVLTGKQATEQAVKKASSPEIMVLTTHGIFLPSDN+ TTSEFTFDSEPRTELNNPLLRSGLLFAGFNESTS SDGVLTGAEILETDLEHTDLVVMSACDTALGEINN Sbjct: 881 KLWSPLPDSVKQSRNIIISPDASLWLVPWAALSVQGEPLIKSHQLRLVVSGRDLIPSDETASANAPLIVADPDFETKVSAPDQSPAPPAIETRGSANFKNFSPVPRLKFAAAEAASITPAINQLCGRPPVVLTGKQATEQAVKKASSPEIMVLTTHGIFLPSDNDTTTSEFTFDSEPRTELNNPLLRSGLLFAGFNESTSDSDGVLTGAEILETDLEHTDLVVMSACDTALGEINN 1116
BLAST of mRNA_M-pyrifera_M_contig97219.22391.1 vs. uniprot
Match: A0A3D3RB62_9PLAN (CHAT domain-containing protein (Fragment) n=1 Tax=Gimesia maris TaxID=122 RepID=A0A3D3RB62_9PLAN) HSP 1 Score: 402 bits (1034), Expect = 3.340e-136 Identity = 208/236 (88.14%), Postives = 219/236 (92.80%), Query Frame = 1 Query: 1 KLWSPLPDSVKQSRNIIISPDASLWLVPWAALSVQGEPLIKSHQLRLVVSGRDLLPSDETASANAPLIVADPDFETKVSAPDQSPAPPAIETRGSAIFKNFSPVPRLKFAAAEAASITPAINQLCGRPPVVLTGKQATEQAVKKASSPEIMVLTTHGIFLPSDNNATTSEFTFDSEPRTELNNPLLRSGLLFAGFNESTSGSDGVLTGAEILETDLEHTDLVVMSACDTALGEINN 708 KLWSPLPDSVKQ+RNIIISPDASLWLVPW AL QGE LI+SHQ R VVSGRDL+ SDETASANAPLIVADPDFETKVSAP QS A PAIETRG+A FKNFSPVPRLKFAAAEAASITPAI QLCGRPPVVLTGKQATEQ+VK ASSPEIMVLTTHGIFLP+DN+AT SEFTFDS R+ELNNPLLRSGLLFAGFN+S++GS GVLTGAEILETDLEHTDLVVMSACDTALGEINN Sbjct: 232 KLWSPLPDSVKQARNIIISPDASLWLVPWTALPAQGELLIRSHQFRFVVSGRDLISSDETASANAPLIVADPDFETKVSAPVQSSASPAIETRGTANFKNFSPVPRLKFAAAEAASITPAIEQLCGRPPVVLTGKQATEQSVKAASSPEIMVLTTHGIFLPTDNDATASEFTFDSGSRSELNNPLLRSGLLFAGFNQSSTGSAGVLTGAEILETDLEHTDLVVMSACDTALGEINN 467
BLAST of mRNA_M-pyrifera_M_contig97219.22391.1 vs. uniprot
Match: A0A5C6A8E6_9BACT (CHAT domain protein n=1 Tax=Rhodopirellula pilleata TaxID=2714738 RepID=A0A5C6A8E6_9BACT) HSP 1 Score: 164 bits (415), Expect = 9.970e-43 Identity = 105/272 (38.60%), Postives = 147/272 (54.04%), Query Frame = 1 Query: 1 KLWSPLPDSVKQSRNIIISPDASLWLVPWAALSVQGEP---------LIKSHQLRLVVSGRDLLPSDETASANAPLIVADPDFETKVSA-PDQSPAPPAIETRGSAIFKNFSPVPRLKFAAAEAASITPAINQLCGRPPVVLTGKQATEQAVKKASSPEIMVLTTHGIFLPSDNNA------------------------TTSEFTFDSEPRTELNNPLLRSGLLFAGFNES----TSGSDGVLTGAEILETDLEHTDLVVMSACDTALGEI 702 +LW P SV+ ++ISPDA LWLVPWAAL++ L++ H + L+VSGRD L ET P+IVADP F+ ++ A QSP P A +R F V RL EA SI P ++++ G+P ++ G+ A E VK SP +V++THG FLPSD+++ T++ + D+E ++ L R GLL AG N++ T+ DG+LTG EIL DL T+LVV+SACDT LG+I Sbjct: 1118 QLWEPFASSVQPEERLVISPDAGLWLVPWAALTISNAEDSIGDSPRYLVEEHAIELIVSGRDRLRKYETFPKTPPVIVADPAFDAEIGALQPQSPEPAA--SRSLVADLAFERVSRLPATRLEAVSIKPRLDKISGQPAILKLGEDAVEGFVKSIHSPHTLVISTHGFFLPSDSSSPILDRFSRQLLQLRSVAPKASPALTSTPSSTDTETPSKPLFALFRCGLLMAGCNDAQNATTAVDDGILTGFEILGLDLRGTELVVLSACDTGLGDI 1387
BLAST of mRNA_M-pyrifera_M_contig97219.22391.1 vs. uniprot
Match: A0A2S8FN10_9BACT (CHAT domain-containing protein n=1 Tax=Blastopirellula marina TaxID=124 RepID=A0A2S8FN10_9BACT) HSP 1 Score: 162 bits (409), Expect = 6.110e-42 Identity = 96/249 (38.55%), Postives = 146/249 (58.63%), Query Frame = 1 Query: 4 LWSPLPDSVKQSRN-IIISPDASLWLVPWAAL-SVQGEPLIKSHQLRLVVSGRDLLPSDETASANAPLIVADPDFETKVSAPD-------QSPAPPAIETRGSAIFKNFSPVPRLKFAAAEAASITPAINQLCGRPPVVLTGKQATEQAVKKASSPEIMVLTTHGIFLPSDNNATTSEFTFDSEPRTE------LNNPLLRSGLLFAGFNESTSG-SDGVLTGAEILETDLEHTDLVVMSACDTALGEI 702 +W PL D + ++ N +IISPD++LWL+PWAAL + L++ +Q++ V SGR+LLP +E S PLI ADPD++ + ++PAP + T A+ PV RL EAA++TP+I ++ G P G+ A E VK+ + P+I++L+THG FLP S + E ++NPLLR G+L AG N DG+LTG E+++ DL+ T+LVV+SAC+T +G++ Sbjct: 815 VWQPLKDKLPEATNQLIISPDSTLWLLPWAALPGNEAHYLVEDYQVQYVGSGRELLPKEEKTSTRIPLIFADPDYDLSPADSKAALAKIFRNPAPKSSITDRFAVQTKLPPVGRLPGTKEEAAAVTPSIEKIGGGAPKSFLGEAALEGVVKRVTGPKILLLSTHGFFLPEPKLEPQILARLSSPLKQEYATIQQVDNPLLRCGVLMAGCNNPPVDLDDGILTGMEVIDIDLQGTELVVLSACETGVGDV 1063
BLAST of mRNA_M-pyrifera_M_contig97219.22391.1 vs. uniprot
Match: A0A518C2M6_9BACT (Photosystem I assembly protein Ycf3 n=1 Tax=Bremerella volcania TaxID=2527984 RepID=A0A518C2M6_9BACT) HSP 1 Score: 156 bits (395), Expect = 4.740e-40 Identity = 98/260 (37.69%), Postives = 144/260 (55.38%), Query Frame = 1 Query: 4 LWSPLPDSVK-QSRNIIISPDASLWLVPWAALSVQGEP-LIKSHQLRLVVSGRDLLPSDETASANAPLIVADPDFETKVSAPDQSPAPPAIE------------TRGSAIFKNFSPVPRLKFAAAEAASITPAINQLCGRPPVVLTGKQATEQAVKKASSPEIMVLTTHGIFLP------------SDNNATTSEFTFDSEPRTELNNPLLRSGLLFAGFNESTSGSD-GVLTGAEILETDLEHTDLVVMSACDTALGEI 702 +W P+ D + ++ N+I+SPD ++WL+PW+ L V + LI+ + L+ V+SGR+L+ + S PL+ ADP F+ PDQ+ A+E TRG VP L AEAA I P + + + PV GK A E K+ P ++VL+THG FLP S++ + + T D +P + NPLLR G+LFAG N+ +G+D GVLTG EI+ DL T+LVV+SAC+T LG++ Sbjct: 1100 IWQPIADKLPPETENVILSPDGAMWLLPWSTLPVSEDRFLIEDYALQYVISGRELVQKAQPVSRQTPLLFADPTFDLS---PDQTQT--AVEAIFRGEKFDREATRGLVSQTALGKVPALPNTRAEAAVIAPNMETIAEKKPVSYLGKYALETVAKRVDRPRMLVLSTHGFFLPDQEVELDDRDLASNDTRSAALLTVDGKP---VENPLLRCGMLFAGCNQPAAGADDGVLTGMEIVGMDLRGTELVVLSACETGLGDV 1351
BLAST of mRNA_M-pyrifera_M_contig97219.22391.1 vs. uniprot
Match: A0A2S8F8J5_9BACT (CHAT domain-containing protein n=2 Tax=Pirellulaceae TaxID=2691357 RepID=A0A2S8F8J5_9BACT) HSP 1 Score: 156 bits (394), Expect = 6.140e-40 Identity = 95/265 (35.85%), Postives = 147/265 (55.47%), Query Frame = 1 Query: 1 KLWSPL----PDSVKQSRNIIISPDASLWLVPWAALSVQGEP-LIKSHQLRLVVSGRDLLPSDETASANAPLIVADPDFETKVSAPDQSPAPPAIETRGSAIFKNF------------------SPVPRLKFAAAEAASITPAINQLCGRPPVVLTGKQATEQAVKKASSPEIMVLTTHGIFLPSDNNATTSEFTFDSEPRTELN-----NPLLRSGLLFAGFNESTS-GSDGVLTGAEILETDLEHTDLVVMSACDTALGEINN 708 K+W PL PD KQ +++SPD +LWL+PW + + + LI+ + LR + SGR+L+ + A+ APL+ ADP F+ +P ++ + +IF++ +P+P + EA +I+P+++ +CG+ P+ GK A E K+ SP ++VL+THG FLP +AT ++ +L NPLLR GLL AG N T+ G DG+LTG EIL DL T+LVV+SAC+T +G +N+ Sbjct: 730 KIWDPLAQHFPDETKQ---LVLSPDGALWLMPWNTIPIGDDRYLIEDYSLRFLTSGRELVLPKKKAAIGAPLLFADPSFDL---------SPDSVRSAVQSIFRSVDIQKLPAGAISRTAIPQVTPLPSTRL---EALAISPSVSNICGKEPIQYLGKFALETVAKEVKSPRVLVLSTHGFFLPEQASATGRSTVSNASSTRKLKAGIPENPLLRCGLLLAGCNNPTARGDDGILTGMEILGLDLRGTELVVLSACETGVGTVNS 979
BLAST of mRNA_M-pyrifera_M_contig97219.22391.1 vs. uniprot
Match: A0A518CC36_9BACT (CHAT domain protein n=1 Tax=Bremerella volcania TaxID=2527984 RepID=A0A518CC36_9BACT) HSP 1 Score: 154 bits (390), Expect = 2.110e-39 Identity = 94/259 (36.29%), Postives = 142/259 (54.83%), Query Frame = 1 Query: 1 KLWSPLPDSVK-QSRNIIISPDASLWLVPWAAL-SVQGEPLIKSHQLRLVVSGRDLLPSDETASANAPLIVADPDFETKVSAPDQSPAPPAIETRGSAIFKNFS---------------PVPRLKFAAAEAASITPAINQLCGRPPVVLTGKQATEQAVKKASSPEIMVLTTHGIFLPS-DNNATTSEFTFDSEPRTELN----NPLLRSGLLFAGFNESTS-GSDGVLTGAEILETDLEHTDLVVMSACDTALGEINN 708 KLW P+ + +++ +++SPD +LWL+PW ++ + + LI+ + +R + SGR+L+ + A PL+ ADP F+ P ++ +IF++ V L EA +I P++ Q+CG+ P+ GK A E K+ SP+I+VL+THG FLP D A S T + P N NPLLR GLL AG N T+ G DG+LTG EIL DL T+LVV+SAC+T +G++N+ Sbjct: 730 KLWDPIAKRIPAETKQLLLSPDGALWLMPWNSVPTAEDRFLIEDYSIRYLTSGRELVLPKDKAVIGPPLLFADPSFDL---------TPDSVRNAVQSIFRSIDVQKLPVGAISRTAIPQVSSLPSTRLEAMAIAPSVTQICGKEPIQYLGKFALETVAKQVKSPKILVLSTHGFFLPEQDRPAGQSVATRSANPSHAKNGKPENPLLRCGLLLAGCNNPTARGDDGILTGMEILSLDLRGTELVVLSACETGVGKVNS 979
BLAST of mRNA_M-pyrifera_M_contig97219.22391.1 vs. uniprot
Match: A0A517YGY4_9BACT (Photosystem I assembly protein Ycf3 n=2 Tax=Anatilimnocola aggregata TaxID=2528021 RepID=A0A517YGY4_9BACT) HSP 1 Score: 153 bits (387), Expect = 5.360e-39 Identity = 98/256 (38.28%), Postives = 139/256 (54.30%), Query Frame = 1 Query: 4 LWSPLPDSVKQSRNIIISPDASLWLVPWAALSVQ-GEPLIKSHQLRLVVSGRDLLPSDETASANAPLIVADPDFETKVSAPDQSPAPPAIETR-GSAIFKNFSPVPRLKFAAAEAASITPAINQLCGRPPVVLTGKQATEQAVKKASSPEIMVLTTHGIFLPSDNNATTSEF--------------TFDSEPRTELNNPLLRSGLLFAGFNE----STSG-SDGVLTGAEILETDLEHTDLVVMSACDTALGEINN 708 +W PL + + +I+SPDA+LWLVPW AL V+ G+ LI+ + L+ V+SGR+L+ A +++ADPDF+ SA A PA T+ RL A EA +I P++ R P+V ++ATE K+ SP+++VL THG F P T ++ T D +P L NPLLR G+L AG N +T+G DGVLTG EI+ DL T+LVV+SAC T LG++ + Sbjct: 783 IWKPLAEHLADKEELILSPDAALWLVPWGALPVEDGKFLIEKYNLKYVISGRELVTKKADKPAGKSVVLADPDFDLGPSA-----ATPAETTKLARRSITRLDRAQRLPGTAKEAEAIAPSLKTYSKRDPIVYLNREATESQFKQLVSPQVLVLGTHGFFFPQQEVETQNDDRLQLIGQEERRSVRTKDGQP---LENPLLRCGVLLAGCNRPATAATTGLDDGVLTGLEIVNADLRGTELVVLSACQTGLGDVRS 1030
BLAST of mRNA_M-pyrifera_M_contig97219.22391.1 vs. uniprot
Match: A0A5C6AHE4_9BACT (CHAT domain protein n=1 Tax=Rhodopirellula pilleata TaxID=2714738 RepID=A0A5C6AHE4_9BACT) HSP 1 Score: 153 bits (386), Expect = 7.120e-39 Identity = 95/240 (39.58%), Postives = 143/240 (59.58%), Query Frame = 1 Query: 34 QSRNIIISPDASLWLVPWAALSV-QGEPLIKSHQLRLVVSGRDLLPSDETASANAPLIVADPDFETKVSAPDQSP-----------APPAIETRGSAIFKNFSPVPRLKFAAAEAASITPAINQLCGRPPVVLTGKQATEQAVKKASSPEIMVLTTHGIFLPSDNNATTSEFTFDSEPRTELNNPLLRSGLLFAGFNESTSGS---DGVLTGAEILETDLEHTDLVVMSACDTALGEINN 708 Q+ +++SPDA LWLVPWAAL V + E L++ + + +VSGRDL+ SD+ ++ P+++A+P+++ + DQ+ + PA+ S + + V RL EAA++ P I +L G+PP + + + A E K+ PEI++L+THG FLPS AT S + + NPL+R GLL G NE + S DGVLTG EI+ TDL T LVV+SAC+T LGE+++ Sbjct: 691 QATKLLLSPDAGLWLVPWAALPVGENEYLVERYDISYLVSGRDLIASDDESTLGQPIVMANPNYDLSPAEADQAARKIFGNDTSERSAPALTAGPSMLGR----VGRLPGTEVEAAAVMPKIGELAGQPPQLYSDRWALELVFKQVHRPEILMLSTHGFFLPSQ--ATESSGIDAAGGQV---NPLIRCGLLLTGCNERAADSRIDDGVLTGLEIVSTDLRGTRLVVLSACETGLGEVHS 921
BLAST of mRNA_M-pyrifera_M_contig97219.22391.1 vs. uniprot
Match: A0A517YGT5_9BACT (Photosystem I assembly protein Ycf3 n=1 Tax=Anatilimnocola aggregata TaxID=2528021 RepID=A0A517YGT5_9BACT) HSP 1 Score: 151 bits (382), Expect = 2.460e-38 Identity = 96/253 (37.94%), Postives = 133/253 (52.57%), Query Frame = 1 Query: 4 LWSPLPDSVKQSRNIIISPDASLWLVPWAALSVQ-GEPLIKSHQLRLVVSGRDLLPSDETASANAPLIVADPDFETKVSAPDQSPAPPAIETR-GSAIFKNFSPVPRLKFAAAEAASITPAINQLCGRPPVVLTGKQATEQAVKKASSPEIMVLTTHGIFLPSDNNATTSEF--------------TFDSEPRTELNNPLLRSGLLFAGFNESTSGS--DGVLTGAEILETDLEHTDLVVMSACDTALGEINN 708 +W PL + + +I+SPDA+LWLVPW AL V+ G+ LI+ + L+ V+SGR+L+ +++ADPDF+ SA AP ET+ RL A EA +I P++ R PVV +ATE K+ SP+++VL THG F P T + T D +P L NPLLR G+L AG N + DGVLTG EI+ DL T+LVV+SAC T LG++ + Sbjct: 697 IWKPLAEHLADKEELILSPDAALWLVPWGALPVEDGKFLIEKYNLKYVISGRELVTKKADQPTEKSVVLADPDFDLGSSA-----APSTAETKIARRSITRLDRAQRLPGTAKEAEAIAPSLKTYGKRDPVVYLNHEATESQFKQLVSPQVLVLGTHGFFFPQQEIETKDDDRLQLIEQEERRSVRTKDGQP---LENPLLRCGVLLAGCNRPPAAGQEDGVLTGLEIVNADLRGTELVVLSACQTGLGDVRS 941 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig97219.22391.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig97219.22391.1 >prot_M-pyrifera_M_contig97219.22391.1 ID=prot_M-pyrifera_M_contig97219.22391.1|Name=mRNA_M-pyrifera_M_contig97219.22391.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=236bp KLWSPLPDSVKQSRNIIISPDASLWLVPWAALSVQGEPLIKSHQLRLVVSback to top mRNA from alignment at M-pyrifera_M_contig97219:3..710+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig97219.22391.1 ID=mRNA_M-pyrifera_M_contig97219.22391.1|Name=mRNA_M-pyrifera_M_contig97219.22391.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=708bp|location=Sequence derived from alignment at M-pyrifera_M_contig97219:3..710+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig97219:3..710+ >mRNA_M-pyrifera_M_contig97219.22391.1 ID=mRNA_M-pyrifera_M_contig97219.22391.1|Name=mRNA_M-pyrifera_M_contig97219.22391.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1416bp|location=Sequence derived from alignment at M-pyrifera_M_contig97219:3..710+ (Macrocystis pyrifera P11B4 male)back to top |