mRNA_M-pyrifera_M_contig97219.22391.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig97219.22391.1
Unique NamemRNA_M-pyrifera_M_contig97219.22391.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig97219.22391.1 vs. uniprot
Match: A0A2E7KGD5_9PLAN (Uncharacterized protein n=8 Tax=Gimesia TaxID=1649453 RepID=A0A2E7KGD5_9PLAN)

HSP 1 Score: 449 bits (1156), Expect = 2.950e-147
Identity = 231/236 (97.88%), Postives = 233/236 (98.73%), Query Frame = 1
Query:    1 KLWSPLPDSVKQSRNIIISPDASLWLVPWAALSVQGEPLIKSHQLRLVVSGRDLLPSDETASANAPLIVADPDFETKVSAPDQSPAPPAIETRGSAIFKNFSPVPRLKFAAAEAASITPAINQLCGRPPVVLTGKQATEQAVKKASSPEIMVLTTHGIFLPSDNNATTSEFTFDSEPRTELNNPLLRSGLLFAGFNESTSGSDGVLTGAEILETDLEHTDLVVMSACDTALGEINN 708
            KLWSPLPDSVKQSRNIIISPDASLWLVPWAALSVQGEPLIKSHQLRLVVSGRDL+PSDETASANAPLIVADPDFETKVSAPDQSPAPPAIETRGSA FKNFSPVPRLKFAAAEAASITPAINQLCGRPPVVLTGKQATEQAVKKASSPEIMVLTTHGIFLPSDN+ TTSEFTFDSEPRTELNNPLLRSGLLFAGFNESTS SDGVLTGAEILETDLEHTDLVVMSACDTALGEINN
Sbjct:  881 KLWSPLPDSVKQSRNIIISPDASLWLVPWAALSVQGEPLIKSHQLRLVVSGRDLIPSDETASANAPLIVADPDFETKVSAPDQSPAPPAIETRGSANFKNFSPVPRLKFAAAEAASITPAINQLCGRPPVVLTGKQATEQAVKKASSPEIMVLTTHGIFLPSDNDTTTSEFTFDSEPRTELNNPLLRSGLLFAGFNESTSDSDGVLTGAEILETDLEHTDLVVMSACDTALGEINN 1116          
BLAST of mRNA_M-pyrifera_M_contig97219.22391.1 vs. uniprot
Match: A0A3D3RB62_9PLAN (CHAT domain-containing protein (Fragment) n=1 Tax=Gimesia maris TaxID=122 RepID=A0A3D3RB62_9PLAN)

HSP 1 Score: 402 bits (1034), Expect = 3.340e-136
Identity = 208/236 (88.14%), Postives = 219/236 (92.80%), Query Frame = 1
Query:    1 KLWSPLPDSVKQSRNIIISPDASLWLVPWAALSVQGEPLIKSHQLRLVVSGRDLLPSDETASANAPLIVADPDFETKVSAPDQSPAPPAIETRGSAIFKNFSPVPRLKFAAAEAASITPAINQLCGRPPVVLTGKQATEQAVKKASSPEIMVLTTHGIFLPSDNNATTSEFTFDSEPRTELNNPLLRSGLLFAGFNESTSGSDGVLTGAEILETDLEHTDLVVMSACDTALGEINN 708
            KLWSPLPDSVKQ+RNIIISPDASLWLVPW AL  QGE LI+SHQ R VVSGRDL+ SDETASANAPLIVADPDFETKVSAP QS A PAIETRG+A FKNFSPVPRLKFAAAEAASITPAI QLCGRPPVVLTGKQATEQ+VK ASSPEIMVLTTHGIFLP+DN+AT SEFTFDS  R+ELNNPLLRSGLLFAGFN+S++GS GVLTGAEILETDLEHTDLVVMSACDTALGEINN
Sbjct:  232 KLWSPLPDSVKQARNIIISPDASLWLVPWTALPAQGELLIRSHQFRFVVSGRDLISSDETASANAPLIVADPDFETKVSAPVQSSASPAIETRGTANFKNFSPVPRLKFAAAEAASITPAIEQLCGRPPVVLTGKQATEQSVKAASSPEIMVLTTHGIFLPTDNDATASEFTFDSGSRSELNNPLLRSGLLFAGFNQSSTGSAGVLTGAEILETDLEHTDLVVMSACDTALGEINN 467          
BLAST of mRNA_M-pyrifera_M_contig97219.22391.1 vs. uniprot
Match: A0A5C6A8E6_9BACT (CHAT domain protein n=1 Tax=Rhodopirellula pilleata TaxID=2714738 RepID=A0A5C6A8E6_9BACT)

HSP 1 Score: 164 bits (415), Expect = 9.970e-43
Identity = 105/272 (38.60%), Postives = 147/272 (54.04%), Query Frame = 1
Query:    1 KLWSPLPDSVKQSRNIIISPDASLWLVPWAALSVQGEP---------LIKSHQLRLVVSGRDLLPSDETASANAPLIVADPDFETKVSA-PDQSPAPPAIETRGSAIFKNFSPVPRLKFAAAEAASITPAINQLCGRPPVVLTGKQATEQAVKKASSPEIMVLTTHGIFLPSDNNA------------------------TTSEFTFDSEPRTELNNPLLRSGLLFAGFNES----TSGSDGVLTGAEILETDLEHTDLVVMSACDTALGEI 702
            +LW P   SV+    ++ISPDA LWLVPWAAL++             L++ H + L+VSGRD L   ET     P+IVADP F+ ++ A   QSP P A  +R       F  V RL     EA SI P ++++ G+P ++  G+ A E  VK   SP  +V++THG FLPSD+++                        T++  + D+E  ++    L R GLL AG N++    T+  DG+LTG EIL  DL  T+LVV+SACDT LG+I
Sbjct: 1118 QLWEPFASSVQPEERLVISPDAGLWLVPWAALTISNAEDSIGDSPRYLVEEHAIELIVSGRDRLRKYETFPKTPPVIVADPAFDAEIGALQPQSPEPAA--SRSLVADLAFERVSRLPATRLEAVSIKPRLDKISGQPAILKLGEDAVEGFVKSIHSPHTLVISTHGFFLPSDSSSPILDRFSRQLLQLRSVAPKASPALTSTPSSTDTETPSKPLFALFRCGLLMAGCNDAQNATTAVDDGILTGFEILGLDLRGTELVVLSACDTGLGDI 1387          
BLAST of mRNA_M-pyrifera_M_contig97219.22391.1 vs. uniprot
Match: A0A2S8FN10_9BACT (CHAT domain-containing protein n=1 Tax=Blastopirellula marina TaxID=124 RepID=A0A2S8FN10_9BACT)

HSP 1 Score: 162 bits (409), Expect = 6.110e-42
Identity = 96/249 (38.55%), Postives = 146/249 (58.63%), Query Frame = 1
Query:    4 LWSPLPDSVKQSRN-IIISPDASLWLVPWAAL-SVQGEPLIKSHQLRLVVSGRDLLPSDETASANAPLIVADPDFETKVSAPD-------QSPAPPAIETRGSAIFKNFSPVPRLKFAAAEAASITPAINQLCGRPPVVLTGKQATEQAVKKASSPEIMVLTTHGIFLPSDNNATTSEFTFDSEPRTE------LNNPLLRSGLLFAGFNESTSG-SDGVLTGAEILETDLEHTDLVVMSACDTALGEI 702
            +W PL D + ++ N +IISPD++LWL+PWAAL   +   L++ +Q++ V SGR+LLP +E  S   PLI ADPD++   +          ++PAP +  T   A+     PV RL     EAA++TP+I ++ G  P    G+ A E  VK+ + P+I++L+THG FLP             S  + E      ++NPLLR G+L AG N       DG+LTG E+++ DL+ T+LVV+SAC+T +G++
Sbjct:  815 VWQPLKDKLPEATNQLIISPDSTLWLLPWAALPGNEAHYLVEDYQVQYVGSGRELLPKEEKTSTRIPLIFADPDYDLSPADSKAALAKIFRNPAPKSSITDRFAVQTKLPPVGRLPGTKEEAAAVTPSIEKIGGGAPKSFLGEAALEGVVKRVTGPKILLLSTHGFFLPEPKLEPQILARLSSPLKQEYATIQQVDNPLLRCGVLMAGCNNPPVDLDDGILTGMEVIDIDLQGTELVVLSACETGVGDV 1063          
BLAST of mRNA_M-pyrifera_M_contig97219.22391.1 vs. uniprot
Match: A0A518C2M6_9BACT (Photosystem I assembly protein Ycf3 n=1 Tax=Bremerella volcania TaxID=2527984 RepID=A0A518C2M6_9BACT)

HSP 1 Score: 156 bits (395), Expect = 4.740e-40
Identity = 98/260 (37.69%), Postives = 144/260 (55.38%), Query Frame = 1
Query:    4 LWSPLPDSVK-QSRNIIISPDASLWLVPWAALSVQGEP-LIKSHQLRLVVSGRDLLPSDETASANAPLIVADPDFETKVSAPDQSPAPPAIE------------TRGSAIFKNFSPVPRLKFAAAEAASITPAINQLCGRPPVVLTGKQATEQAVKKASSPEIMVLTTHGIFLP------------SDNNATTSEFTFDSEPRTELNNPLLRSGLLFAGFNESTSGSD-GVLTGAEILETDLEHTDLVVMSACDTALGEI 702
            +W P+ D +  ++ N+I+SPD ++WL+PW+ L V  +  LI+ + L+ V+SGR+L+   +  S   PL+ ADP F+     PDQ+    A+E            TRG         VP L    AEAA I P +  +  + PV   GK A E   K+   P ++VL+THG FLP            S++  + +  T D +P   + NPLLR G+LFAG N+  +G+D GVLTG EI+  DL  T+LVV+SAC+T LG++
Sbjct: 1100 IWQPIADKLPPETENVILSPDGAMWLLPWSTLPVSEDRFLIEDYALQYVISGRELVQKAQPVSRQTPLLFADPTFDLS---PDQTQT--AVEAIFRGEKFDREATRGLVSQTALGKVPALPNTRAEAAVIAPNMETIAEKKPVSYLGKYALETVAKRVDRPRMLVLSTHGFFLPDQEVELDDRDLASNDTRSAALLTVDGKP---VENPLLRCGMLFAGCNQPAAGADDGVLTGMEIVGMDLRGTELVVLSACETGLGDV 1351          
BLAST of mRNA_M-pyrifera_M_contig97219.22391.1 vs. uniprot
Match: A0A2S8F8J5_9BACT (CHAT domain-containing protein n=2 Tax=Pirellulaceae TaxID=2691357 RepID=A0A2S8F8J5_9BACT)

HSP 1 Score: 156 bits (394), Expect = 6.140e-40
Identity = 95/265 (35.85%), Postives = 147/265 (55.47%), Query Frame = 1
Query:    1 KLWSPL----PDSVKQSRNIIISPDASLWLVPWAALSVQGEP-LIKSHQLRLVVSGRDLLPSDETASANAPLIVADPDFETKVSAPDQSPAPPAIETRGSAIFKNF------------------SPVPRLKFAAAEAASITPAINQLCGRPPVVLTGKQATEQAVKKASSPEIMVLTTHGIFLPSDNNATTSEFTFDSEPRTELN-----NPLLRSGLLFAGFNESTS-GSDGVLTGAEILETDLEHTDLVVMSACDTALGEINN 708
            K+W PL    PD  KQ   +++SPD +LWL+PW  + +  +  LI+ + LR + SGR+L+   + A+  APL+ ADP F+          +P ++ +   +IF++                   +P+P  +    EA +I+P+++ +CG+ P+   GK A E   K+  SP ++VL+THG FLP   +AT      ++    +L      NPLLR GLL AG N  T+ G DG+LTG EIL  DL  T+LVV+SAC+T +G +N+
Sbjct:  730 KIWDPLAQHFPDETKQ---LVLSPDGALWLMPWNTIPIGDDRYLIEDYSLRFLTSGRELVLPKKKAAIGAPLLFADPSFDL---------SPDSVRSAVQSIFRSVDIQKLPAGAISRTAIPQVTPLPSTRL---EALAISPSVSNICGKEPIQYLGKFALETVAKEVKSPRVLVLSTHGFFLPEQASATGRSTVSNASSTRKLKAGIPENPLLRCGLLLAGCNNPTARGDDGILTGMEILGLDLRGTELVVLSACETGVGTVNS 979          
BLAST of mRNA_M-pyrifera_M_contig97219.22391.1 vs. uniprot
Match: A0A518CC36_9BACT (CHAT domain protein n=1 Tax=Bremerella volcania TaxID=2527984 RepID=A0A518CC36_9BACT)

HSP 1 Score: 154 bits (390), Expect = 2.110e-39
Identity = 94/259 (36.29%), Postives = 142/259 (54.83%), Query Frame = 1
Query:    1 KLWSPLPDSVK-QSRNIIISPDASLWLVPWAAL-SVQGEPLIKSHQLRLVVSGRDLLPSDETASANAPLIVADPDFETKVSAPDQSPAPPAIETRGSAIFKNFS---------------PVPRLKFAAAEAASITPAINQLCGRPPVVLTGKQATEQAVKKASSPEIMVLTTHGIFLPS-DNNATTSEFTFDSEPRTELN----NPLLRSGLLFAGFNESTS-GSDGVLTGAEILETDLEHTDLVVMSACDTALGEINN 708
            KLW P+   +  +++ +++SPD +LWL+PW ++ + +   LI+ + +R + SGR+L+   + A    PL+ ADP F+           P ++     +IF++                  V  L     EA +I P++ Q+CG+ P+   GK A E   K+  SP+I+VL+THG FLP  D  A  S  T  + P    N    NPLLR GLL AG N  T+ G DG+LTG EIL  DL  T+LVV+SAC+T +G++N+
Sbjct:  730 KLWDPIAKRIPAETKQLLLSPDGALWLMPWNSVPTAEDRFLIEDYSIRYLTSGRELVLPKDKAVIGPPLLFADPSFDL---------TPDSVRNAVQSIFRSIDVQKLPVGAISRTAIPQVSSLPSTRLEAMAIAPSVTQICGKEPIQYLGKFALETVAKQVKSPKILVLSTHGFFLPEQDRPAGQSVATRSANPSHAKNGKPENPLLRCGLLLAGCNNPTARGDDGILTGMEILSLDLRGTELVVLSACETGVGKVNS 979          
BLAST of mRNA_M-pyrifera_M_contig97219.22391.1 vs. uniprot
Match: A0A517YGY4_9BACT (Photosystem I assembly protein Ycf3 n=2 Tax=Anatilimnocola aggregata TaxID=2528021 RepID=A0A517YGY4_9BACT)

HSP 1 Score: 153 bits (387), Expect = 5.360e-39
Identity = 98/256 (38.28%), Postives = 139/256 (54.30%), Query Frame = 1
Query:    4 LWSPLPDSVKQSRNIIISPDASLWLVPWAALSVQ-GEPLIKSHQLRLVVSGRDLLPSDETASANAPLIVADPDFETKVSAPDQSPAPPAIETR-GSAIFKNFSPVPRLKFAAAEAASITPAINQLCGRPPVVLTGKQATEQAVKKASSPEIMVLTTHGIFLPSDNNATTSEF--------------TFDSEPRTELNNPLLRSGLLFAGFNE----STSG-SDGVLTGAEILETDLEHTDLVVMSACDTALGEINN 708
            +W PL + +     +I+SPDA+LWLVPW AL V+ G+ LI+ + L+ V+SGR+L+       A   +++ADPDF+   SA     A PA  T+             RL   A EA +I P++     R P+V   ++ATE   K+  SP+++VL THG F P     T ++               T D +P   L NPLLR G+L AG N     +T+G  DGVLTG EI+  DL  T+LVV+SAC T LG++ +
Sbjct:  783 IWKPLAEHLADKEELILSPDAALWLVPWGALPVEDGKFLIEKYNLKYVISGRELVTKKADKPAGKSVVLADPDFDLGPSA-----ATPAETTKLARRSITRLDRAQRLPGTAKEAEAIAPSLKTYSKRDPIVYLNREATESQFKQLVSPQVLVLGTHGFFFPQQEVETQNDDRLQLIGQEERRSVRTKDGQP---LENPLLRCGVLLAGCNRPATAATTGLDDGVLTGLEIVNADLRGTELVVLSACQTGLGDVRS 1030          
BLAST of mRNA_M-pyrifera_M_contig97219.22391.1 vs. uniprot
Match: A0A5C6AHE4_9BACT (CHAT domain protein n=1 Tax=Rhodopirellula pilleata TaxID=2714738 RepID=A0A5C6AHE4_9BACT)

HSP 1 Score: 153 bits (386), Expect = 7.120e-39
Identity = 95/240 (39.58%), Postives = 143/240 (59.58%), Query Frame = 1
Query:   34 QSRNIIISPDASLWLVPWAALSV-QGEPLIKSHQLRLVVSGRDLLPSDETASANAPLIVADPDFETKVSAPDQSP-----------APPAIETRGSAIFKNFSPVPRLKFAAAEAASITPAINQLCGRPPVVLTGKQATEQAVKKASSPEIMVLTTHGIFLPSDNNATTSEFTFDSEPRTELNNPLLRSGLLFAGFNESTSGS---DGVLTGAEILETDLEHTDLVVMSACDTALGEINN 708
            Q+  +++SPDA LWLVPWAAL V + E L++ + +  +VSGRDL+ SD+ ++   P+++A+P+++   +  DQ+            + PA+    S + +    V RL     EAA++ P I +L G+PP + + + A E   K+   PEI++L+THG FLPS   AT S     +  +    NPL+R GLL  G NE  + S   DGVLTG EI+ TDL  T LVV+SAC+T LGE+++
Sbjct:  691 QATKLLLSPDAGLWLVPWAALPVGENEYLVERYDISYLVSGRDLIASDDESTLGQPIVMANPNYDLSPAEADQAARKIFGNDTSERSAPALTAGPSMLGR----VGRLPGTEVEAAAVMPKIGELAGQPPQLYSDRWALELVFKQVHRPEILMLSTHGFFLPSQ--ATESSGIDAAGGQV---NPLIRCGLLLTGCNERAADSRIDDGVLTGLEIVSTDLRGTRLVVLSACETGLGEVHS 921          
BLAST of mRNA_M-pyrifera_M_contig97219.22391.1 vs. uniprot
Match: A0A517YGT5_9BACT (Photosystem I assembly protein Ycf3 n=1 Tax=Anatilimnocola aggregata TaxID=2528021 RepID=A0A517YGT5_9BACT)

HSP 1 Score: 151 bits (382), Expect = 2.460e-38
Identity = 96/253 (37.94%), Postives = 133/253 (52.57%), Query Frame = 1
Query:    4 LWSPLPDSVKQSRNIIISPDASLWLVPWAALSVQ-GEPLIKSHQLRLVVSGRDLLPSDETASANAPLIVADPDFETKVSAPDQSPAPPAIETR-GSAIFKNFSPVPRLKFAAAEAASITPAINQLCGRPPVVLTGKQATEQAVKKASSPEIMVLTTHGIFLPSDNNATTSEF--------------TFDSEPRTELNNPLLRSGLLFAGFNESTSGS--DGVLTGAEILETDLEHTDLVVMSACDTALGEINN 708
            +W PL + +     +I+SPDA+LWLVPW AL V+ G+ LI+ + L+ V+SGR+L+           +++ADPDF+   SA     AP   ET+             RL   A EA +I P++     R PVV    +ATE   K+  SP+++VL THG F P     T  +               T D +P   L NPLLR G+L AG N   +    DGVLTG EI+  DL  T+LVV+SAC T LG++ +
Sbjct:  697 IWKPLAEHLADKEELILSPDAALWLVPWGALPVEDGKFLIEKYNLKYVISGRELVTKKADQPTEKSVVLADPDFDLGSSA-----APSTAETKIARRSITRLDRAQRLPGTAKEAEAIAPSLKTYGKRDPVVYLNHEATESQFKQLVSPQVLVLGTHGFFFPQQEIETKDDDRLQLIEQEERRSVRTKDGQP---LENPLLRCGVLLAGCNRPPAAGQEDGVLTGLEIVNADLRGTELVVLSACQTGLGDVRS 941          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig97219.22391.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2E7KGD5_9PLAN2.950e-14797.88Uncharacterized protein n=8 Tax=Gimesia TaxID=1649... [more]
A0A3D3RB62_9PLAN3.340e-13688.14CHAT domain-containing protein (Fragment) n=1 Tax=... [more]
A0A5C6A8E6_9BACT9.970e-4338.60CHAT domain protein n=1 Tax=Rhodopirellula pilleat... [more]
A0A2S8FN10_9BACT6.110e-4238.55CHAT domain-containing protein n=1 Tax=Blastopirel... [more]
A0A518C2M6_9BACT4.740e-4037.69Photosystem I assembly protein Ycf3 n=1 Tax=Bremer... [more]
A0A2S8F8J5_9BACT6.140e-4035.85CHAT domain-containing protein n=2 Tax=Pirellulace... [more]
A0A518CC36_9BACT2.110e-3936.29CHAT domain protein n=1 Tax=Bremerella volcania Ta... [more]
A0A517YGY4_9BACT5.360e-3938.28Photosystem I assembly protein Ycf3 n=2 Tax=Anatil... [more]
A0A5C6AHE4_9BACT7.120e-3939.58CHAT domain protein n=1 Tax=Rhodopirellula pilleat... [more]
A0A517YGT5_9BACT2.460e-3837.94Photosystem I assembly protein Ycf3 n=1 Tax=Anatil... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig97219contigM-pyrifera_M_contig97219:3..710 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score140.6
Seed ortholog evalue9.5e-31
Seed eggNOG ortholog1123508.JH636440_gene2532
Hectar predicted targeting categoryother localisation
EggNOG free text desc.tetratricopeptide repeat
EggNOG OGs2J07X@203682,COG0457@1,COG0457@2,COG4995@1,COG4995@2
COG Functional cat.M
Best tax levelPlanctomycetes
Best eggNOG OGNA|NA|NA
Exons1
Model size708
Cds size708
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816888.6888683-CDS-M-pyrifera_M_contig97219:2..7101622816888.6888683-CDS-M-pyrifera_M_contig97219:2..710Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig97219 3..710 +
1692278237.9515655-CDS-M-pyrifera_M_contig97219:2..7101692278237.9515655-CDS-M-pyrifera_M_contig97219:2..710Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig97219 3..710 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig97219.22391.1prot_M-pyrifera_M_contig97219.22391.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig97219 3..710 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig97219.22391.1

>prot_M-pyrifera_M_contig97219.22391.1 ID=prot_M-pyrifera_M_contig97219.22391.1|Name=mRNA_M-pyrifera_M_contig97219.22391.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=236bp
KLWSPLPDSVKQSRNIIISPDASLWLVPWAALSVQGEPLIKSHQLRLVVS
GRDLLPSDETASANAPLIVADPDFETKVSAPDQSPAPPAIETRGSAIFKN
FSPVPRLKFAAAEAASITPAINQLCGRPPVVLTGKQATEQAVKKASSPEI
MVLTTHGIFLPSDNNATTSEFTFDSEPRTELNNPLLRSGLLFAGFNESTS
GSDGVLTGAEILETDLEHTDLVVMSACDTALGEINN
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mRNA from alignment at M-pyrifera_M_contig97219:3..710+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig97219.22391.1 ID=mRNA_M-pyrifera_M_contig97219.22391.1|Name=mRNA_M-pyrifera_M_contig97219.22391.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=708bp|location=Sequence derived from alignment at M-pyrifera_M_contig97219:3..710+ (Macrocystis pyrifera P11B4 male)
AAGCTCTGGTCCCCTCTGCCGGACAGTGTGAAACAGTCCCGAAATATCAT CATCAGCCCCGATGCCTCACTCTGGCTCGTCCCCTGGGCAGCACTTTCCG TCCAGGGAGAACCGTTAATCAAATCACATCAGCTCCGCCTGGTGGTCAGT GGACGGGATCTGCTTCCATCAGACGAAACTGCCTCCGCAAATGCACCGCT GATTGTTGCAGACCCGGATTTTGAAACGAAAGTTTCAGCCCCTGATCAGT CCCCTGCTCCCCCCGCGATTGAGACGCGAGGGTCCGCAATTTTCAAGAAC TTCAGCCCCGTACCACGTCTGAAGTTCGCTGCTGCAGAAGCCGCCAGTAT CACACCTGCCATCAATCAACTTTGTGGACGCCCGCCTGTCGTCCTGACCG GAAAGCAGGCGACCGAACAGGCAGTAAAAAAAGCTTCCTCACCCGAAATC ATGGTGCTGACCACGCATGGCATCTTCCTGCCCAGTGACAACAATGCCAC AACAAGTGAGTTCACATTCGACTCCGAGCCTCGCACTGAGTTGAATAACC CGCTGCTCAGGTCAGGCCTGTTGTTCGCAGGCTTTAATGAATCCACTTCA GGTTCAGACGGTGTGTTGACCGGGGCGGAAATTCTGGAAACAGATCTGGA ACACACCGACCTGGTAGTGATGAGTGCCTGTGATACAGCCCTGGGTGAGA TCAACAAC
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig97219:3..710+

>mRNA_M-pyrifera_M_contig97219.22391.1 ID=mRNA_M-pyrifera_M_contig97219.22391.1|Name=mRNA_M-pyrifera_M_contig97219.22391.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1416bp|location=Sequence derived from alignment at M-pyrifera_M_contig97219:3..710+ (Macrocystis pyrifera P11B4 male)
AAGCTCTGGTCCCCTCTGCCGGACAGTGTGAAACAGTCCCGAAATATCAT
CATCAGCCCCGATGCCTCACTCTGGCTCGTCCCCTGGGCAGCACTTTCCG
TCCAGGGAGAACCGTTAATCAAATCACATCAGCTCCGCCTGGTGGTCAGT
GGACGGGATCTGCTTCCATCAGACGAAACTGCCTCCGCAAATGCACCGCT
GATTGTTGCAGACCCGGATTTTGAAACGAAAGTTTCAGCCCCTGATCAGT
CCCCTGCTCCCCCCGCGATTGAGACGCGAGGGTCCGCAATTTTCAAGAAC
TTCAGCCCCGTACCACGTCTGAAGTTCGCTGCTGCAGAAGCCGCCAGTAT
CACACCTGCCATCAATCAACTTTGTGGACGCCCGCCTGTCGTCCTGACCG
GAAAGCAGGCGACCGAACAGGCAGTAAAAAAAGCTTCCTCACCCGAAATC
ATGGTGCTGACCACGCATGGCATCTTCCTGCCCAGTGACAACAATGCCAC
AACAAGTGAGTTCACATTCGACTCCGAGCCTCGCACTGAGTTGAATAACC
CGCTGCTCAGGTCAGGCCTGTTGTTCGCAGGCTTTAATGAATCCACTTCA
GGTTCAGACGGTGTGTTGACCGGGGCGGAAATTCTGGAAACAGATCTGGA
ACACACCGACCTGGTAGTGATGAGTGCCTGTGATACAGCCCTGGGTGAGA
TCAACAACAAGCTCTGGTCCCCTCTGCCGGACAGTGTGAAACAGTCCCGA
AATATCATCATCAGCCCCGATGCCTCACTCTGGCTCGTCCCCTGGGCAGC
ACTTTCCGTCCAGGGAGAACCGTTAATCAAATCACATCAGCTCCGCCTGG
TGGTCAGTGGACGGGATCTGCTTCCATCAGACGAAACTGCCTCCGCAAAT
GCACCGCTGATTGTTGCAGACCCGGATTTTGAAACGAAAGTTTCAGCCCC
TGATCAGTCCCCTGCTCCCCCCGCGATTGAGACGCGAGGGTCCGCAATTT
TCAAGAACTTCAGCCCCGTACCACGTCTGAAGTTCGCTGCTGCAGAAGCC
GCCAGTATCACACCTGCCATCAATCAACTTTGTGGACGCCCGCCTGTCGT
CCTGACCGGAAAGCAGGCGACCGAACAGGCAGTAAAAAAAGCTTCCTCAC
CCGAAATCATGGTGCTGACCACGCATGGCATCTTCCTGCCCAGTGACAAC
AATGCCACAACAAGTGAGTTCACATTCGACTCCGAGCCTCGCACTGAGTT
GAATAACCCGCTGCTCAGGTCAGGCCTGTTGTTCGCAGGCTTTAATGAAT
CCACTTCAGGTTCAGACGGTGTGTTGACCGGGGCGGAAATTCTGGAAACA
GATCTGGAACACACCGACCTGGTAGTGATGAGTGCCTGTGATACAGCCCT
GGGTGAGATCAACAAC
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