mRNA_M-pyrifera_M_contig100091.22.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig100091.22.1 vs. uniprot
Match: A0A2D6U7P6_9ACTN (Uncharacterized protein n=3 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2D6U7P6_9ACTN) HSP 1 Score: 66.2 bits (160), Expect = 3.940e-10 Identity = 31/65 (47.69%), Postives = 47/65 (72.31%), Query Frame = 1 Query: 181 PAELTSSFRGVTPEVIKVGITAVDWDTLAEIGVD-LGRSNALELWEAALDDINARGGIHGRMLEI 372 P LT+S+RGVT + I VG++ +D++ L E+G G + +WEA +DD+NARGGI+GRM++I Sbjct: 75 PVALTASWRGVTEDTIYVGVSLLDFELLVELGFSPSGWGDQAAVWEALVDDLNARGGINGRMVDI 139
BLAST of mRNA_M-pyrifera_M_contig100091.22.1 vs. uniprot
Match: A0A7K1ZBK8_9ACTN (ABC transporter substrate-binding protein n=2 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A7K1ZBK8_9ACTN) HSP 1 Score: 64.7 bits (156), Expect = 1.360e-9 Identity = 33/67 (49.25%), Postives = 42/67 (62.69%), Query Frame = 1 Query: 190 LTSSFRGVTPEVIKVGITAVDWDTLAEIGVDLGRSNALELWEAA-LDDINARGGIHGRMLEIHGTEF 387 LTSS+ GVTPE IKVG+ +D+ L E GVD+ E+W A +D N RGG HGRM+E+ F Sbjct: 87 LTSSWTGVTPETIKVGVAGIDFTRLQEFGVDI-EGIVAEIWAPAWVDAFNRRGGAHGRMMEVVVRNF 152
BLAST of mRNA_M-pyrifera_M_contig100091.22.1 vs. uniprot
Match: A0A2E6UMG5_9ACTN (Peripla_BP_6 domain-containing protein n=2 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2E6UMG5_9ACTN) HSP 1 Score: 61.6 bits (148), Expect = 1.640e-8 Identity = 32/67 (47.76%), Postives = 45/67 (67.16%), Query Frame = 1 Query: 190 LTSSFRGVTPEVIKVGITAVDWDTL-AEIGVDLGRSNALELWEAALDDINARGGIHGRMLEIHGTEF 387 LT SFRGVT + IKVG+TA+D++ L + G+ L +N +EA + D+NARGGI GR +E+ F Sbjct: 111 LTDSFRGVTADTIKVGLTAIDFEGLNRDFGLTLTYANYQPFFEALVADLNARGGILGRQVEMVTRNF 177
BLAST of mRNA_M-pyrifera_M_contig100091.22.1 vs. uniprot
Match: A0A381N747_9ZZZZ (Peripla_BP_6 domain-containing protein (Fragment) n=3 Tax=root TaxID=1 RepID=A0A381N747_9ZZZZ) HSP 1 Score: 59.3 bits (142), Expect = 1.020e-7 Identity = 29/62 (46.77%), Postives = 43/62 (69.35%), Query Frame = 1 Query: 190 LTSSFRGVTPEVIKVGITAVDWDTL-AEIGVDLGRSNALELWEAALDDINARGGIHGRMLEI 372 LT SFRGVT E I+VG+TA++++ L + G+ L +N +EA + D+N RGGIHGR + + Sbjct: 43 LTDSFRGVTAEAIEVGLTAINFEGLNRDFGLSLTYANYRPFFEALVADLNERGGIHGRRVNL 104
BLAST of mRNA_M-pyrifera_M_contig100091.22.1 vs. uniprot
Match: A0A0C1UV49_9ACTN (Uncharacterized protein n=7 Tax=root TaxID=1 RepID=A0A0C1UV49_9ACTN) HSP 1 Score: 57.4 bits (137), Expect = 4.850e-7 Identity = 30/63 (47.62%), Postives = 43/63 (68.25%), Query Frame = 1 Query: 190 LTSSFRGVTPEVIKVGITAVDWDTLAEI--GVDLGRSNALELWEAALDDINARGGIHGRMLEI 372 LT SFRGVT E IKVG T++D++ E G++L +N + + ++D+NARGGI GR +EI Sbjct: 52 LTDSFRGVTAETIKVGFTSIDFELFNEQFPGLNLTYANYPPMVDVLVEDLNARGGILGRKVEI 114
BLAST of mRNA_M-pyrifera_M_contig100091.22.1 vs. uniprot
Match: A0A6L7SH27_9ACTN (Amino acid ABC transporter substrate-binding protein n=6 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A6L7SH27_9ACTN) HSP 1 Score: 57.4 bits (137), Expect = 4.890e-7 Identity = 31/62 (50.00%), Postives = 41/62 (66.13%), Query Frame = 1 Query: 181 PAELTSSFRGVTPEVIKVGITAVDWDTLAEIGVDLGRSNALELWEAALDDINARGGIHGRML 366 P LT+SFRGVT I++GIT++D + G D G A W+ A+D +NA+GGIHGRML Sbjct: 84 PVPLTASFRGVTETEIRIGITSLD---ASMFGFDQGDLAAK--WQVAVDAVNAKGGIHGRML 140
BLAST of mRNA_M-pyrifera_M_contig100091.22.1 vs. uniprot
Match: A0A2E5P224_9ACTN (Uncharacterized protein n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2E5P224_9ACTN) HSP 1 Score: 57.4 bits (137), Expect = 4.950e-7 Identity = 27/67 (40.30%), Postives = 45/67 (67.16%), Query Frame = 1 Query: 190 LTSSFRGVTPEVIKVGITAVDWDTLAEI-GVDLGRSNALELWEAALDDINARGGIHGRMLEIHGTEF 387 L +FRGVT E IK+G+T +D+++L +I + L N + ++EA + DIN+RGG+ GR +++ F Sbjct: 110 LEDTFRGVTSEAIKIGLTVIDFESLNQIFDLSLTYDNWIPVFEAMVADINSRGGVLGRRVDLVSRSF 176
BLAST of mRNA_M-pyrifera_M_contig100091.22.1 vs. uniprot
Match: A0A432JUX6_9ACTN (Uncharacterized protein n=2 Tax=Actinobacteria TaxID=201174 RepID=A0A432JUX6_9ACTN) HSP 1 Score: 55.8 bits (133), Expect = 1.640e-6 Identity = 33/71 (46.48%), Postives = 42/71 (59.15%), Query Frame = 1 Query: 178 APAELTSSFRGVTPEVIKVGITAVDWDTLAE-IGVDLGRSNALELWEAALDDINARGGIHGRMLEIHGTEF 387 AP LT SFRGVT E I VG A+D+D L G+DL +N + E + D+N RGGI GR +E+ F Sbjct: 13 APIILTDSFRGVTAEAILVGWPAIDFDDLNRTFGLDLHYANYGPVIEIVVADLNGRGGILGRRVEVTVRPF 83
BLAST of mRNA_M-pyrifera_M_contig100091.22.1 vs. uniprot
Match: A0A3M2FXY8_ACTSX (Peripla_BP_6 domain-containing protein n=1 Tax=Actinomyces sp. TaxID=29317 RepID=A0A3M2FXY8_ACTSX) HSP 1 Score: 55.8 bits (133), Expect = 1.690e-6 Identity = 28/64 (43.75%), Postives = 43/64 (67.19%), Query Frame = 1 Query: 181 PAELTSSFRGVTPEVIKVGITAVDWDTLAEIGVD-LGRSNALELWEAALDDINARGGIHGRMLE 369 P ELT+S+RGVT + I+VGI+ +D+ L + + G + +W+ +DD+NARGGI GR +E Sbjct: 66 PVELTASWRGVTEDTIRVGISMLDFKFLVDNNLSPSGWGDQQLVWQTFIDDLNARGGILGRSVE 129
BLAST of mRNA_M-pyrifera_M_contig100091.22.1 vs. uniprot
Match: A0A6B1GZK3_9ACTN (Uncharacterized protein n=4 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A6B1GZK3_9ACTN) HSP 1 Score: 53.9 bits (128), Expect = 7.960e-6 Identity = 28/62 (45.16%), Postives = 41/62 (66.13%), Query Frame = 1 Query: 181 PAELTSSFRGVTPEVIKVGITAVDWDTLAEIGVDLGRSNALELWEAALDDINARGGIHGRML 366 P LT+SFRGVT I++G+T++D + G D G + W+ A+D +NA+GGI+GRML Sbjct: 92 PVPLTASFRGVTETEIRIGMTSLDAEMF---GFDQG--DLASKWQVAVDAVNAKGGINGRML 148 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig100091.22.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 12
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig100091.22.1 >prot_M-pyrifera_M_contig100091.22.1 ID=prot_M-pyrifera_M_contig100091.22.1|Name=mRNA_M-pyrifera_M_contig100091.22.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=129bp ALALALALFGASCSGSDSAPSDAGAAAREVDETNDSSAPEDSPASEGQGAback to top mRNA from alignment at M-pyrifera_M_contig100091:1..387- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig100091.22.1 ID=mRNA_M-pyrifera_M_contig100091.22.1|Name=mRNA_M-pyrifera_M_contig100091.22.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=387bp|location=Sequence derived from alignment at M-pyrifera_M_contig100091:1..387- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig100091:1..387- >mRNA_M-pyrifera_M_contig100091.22.1 ID=mRNA_M-pyrifera_M_contig100091.22.1|Name=mRNA_M-pyrifera_M_contig100091.22.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=774bp|location=Sequence derived from alignment at M-pyrifera_M_contig100091:1..387- (Macrocystis pyrifera P11B4 male)back to top |