prot_M-pyrifera_M_contig110260.2152.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_M-pyrifera_M_contig110260.2152.1
Unique Name	prot_M-pyrifera_M_contig110260.2152.1
Type	polypeptide
Organism	Macrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length	116

Homology

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BLAST of mRNA_M-pyrifera_M_contig110260.2152.1 vs. uniprot
Match: A0A6I6A8X3_9PLAN (Carbohydrate porin n=9 Tax=Gimesia TaxID=1649453 RepID=A0A6I6A8X3_9PLAN)

HSP 1 Score: 229 bits (584), Expect = 4.400e-72
Identity = 109/115 (94.78%), Postives = 114/115 (99.13%), Query Frame = 0

Query:    1 AGSTDDQPQGLTIFAQHFPTSTYGRSPFPLIPHDALAGLAYTGLIRGRDQDVTGAGAGWVDLDQGGTDSEIMVEVFYKAQINDALSIQPDLQYITTPSGIYPDAFVAGLRFQLDL 115
            AGSTDDQPQGLT+FAQHFPTSTYGRSPFPLIPHDALAGL+YTGLIRGRDQDVTGAGAGWV+LDQGGT+ EIMVEVFYKAQINDALSIQPDLQYI+TPSGIYPDAFVAGLRFQLDL
Sbjct:  303 AGSTDDQPQGLTVFAQHFPTSTYGRSPFPLIPHDALAGLSYTGLIRGRDQDVTGAGAGWVELDQGGTNREIMVEVFYKAQINDALSIQPDLQYISTPSGIYPDAFVAGLRFQLDL 417

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BLAST of mRNA_M-pyrifera_M_contig110260.2152.1 vs. uniprot
Match: A0A518A601_9PLAN (Porin B n=2 Tax=Gimesia panareensis TaxID=2527978 RepID=A0A518A601_9PLAN)

HSP 1 Score: 214 bits (544), Expect = 3.490e-66
Identity = 99/115 (86.09%), Postives = 108/115 (93.91%), Query Frame = 0

Query:    1 AGSTDDQPQGLTIFAQHFPTSTYGRSPFPLIPHDALAGLAYTGLIRGRDQDVTGAGAGWVDLDQGGTDSEIMVEVFYKAQINDALSIQPDLQYITTPSGIYPDAFVAGLRFQLDL 115
            A STDDQ QGL +FAQHFPT+TYG SP+PLIPHDALAG  YTGL+RGRDQDVTGAGAGWVDLDQGGTD E+MVEVFYKA+IN++LSIQPDLQY+TTPSGIYPDAFVAGLRFQLDL
Sbjct:  293 ADSTDDQRQGLAVFAQHFPTATYGSSPYPLIPHDALAGFVYTGLLRGRDQDVTGAGAGWVDLDQGGTDHEVMVEVFYKARINESLSIQPDLQYVTTPSGIYPDAFVAGLRFQLDL 407

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BLAST of mRNA_M-pyrifera_M_contig110260.2152.1 vs. uniprot
Match: A0A350KB63_9PLAN (Uncharacterized protein (Fragment) n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A350KB63_9PLAN)

HSP 1 Score: 194 bits (492), Expect = 5.810e-62
Identity = 91/114 (79.82%), Postives = 98/114 (85.96%), Query Frame = 0

Query:    1 AGSTDDQPQGLTIFAQHFPTSTYGRSPFPLIPHDALAGLAYTGLIRGRDQDVTGAGAGWVDLDQGGTDSEIMVEVFYKAQINDALSIQPDLQYITTPSGIYPDAFVAGLRFQLD 114
            AG   D PQGL+ FAQHFPT + G SPFPLIP DALAG+ YTGLIR RD DVTGAGAGWVDLDQGGTD E+M+EVFYKA +ND L IQPDLQYITTPSGIYPDAFVAG+RFQLD
Sbjct:   12 AGCDSDNPQGLSAFAQHFPTYSSGNSPFPLIPRDALAGITYTGLIRNRDADVTGAGAGWVDLDQGGTDQEVMIEVFYKAIVNDNLIIQPDLQYITTPSGIYPDAFVAGIRFQLD 125

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BLAST of mRNA_M-pyrifera_M_contig110260.2152.1 vs. uniprot
Match: A0A517V8F1_9PLAN (Porin B n=8 Tax=Gimesia TaxID=1649453 RepID=A0A517V8F1_9PLAN)

HSP 1 Score: 193 bits (491), Expect = 3.420e-58
Identity = 91/115 (79.13%), Postives = 98/115 (85.22%), Query Frame = 0

Query:    1 AGSTDDQPQGLTIFAQHFPTSTYGRSPFPLIPHDALAGLAYTGLIRGRDQDVTGAGAGWVDLDQGGTDSEIMVEVFYKAQINDALSIQPDLQYITTPSGIYPDAFVAGLRFQLDL 115
            AG   D PQGL+ F QHFPT + G SPFPLIP DALAG+ YTGLIR RD DVTGAGAGWVDLDQGGTD E+M+EVFYKA +ND L IQPDLQYITTPSGIYPDAFVAG+RFQLDL
Sbjct:  297 AGCDTDNPQGLSAFVQHFPTYSSGNSPFPLIPRDALAGITYTGLIRNRDADVTGAGAGWVDLDQGGTDQEVMIEVFYKAIVNDNLIIQPDLQYITTPSGIYPDAFVAGIRFQLDL 411

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BLAST of mRNA_M-pyrifera_M_contig110260.2152.1 vs. uniprot
Match: A0A518IC21_9PLAN (Porin B n=2 Tax=Gimesia TaxID=1649453 RepID=A0A518IC21_9PLAN)

HSP 1 Score: 190 bits (483), Expect = 7.300e-57
Identity = 88/115 (76.52%), Postives = 98/115 (85.22%), Query Frame = 0

Query:    1 AGSTDDQPQGLTIFAQHFPTSTYGRSPFPLIPHDALAGLAYTGLIRGRDQDVTGAGAGWVDLDQGGTDSEIMVEVFYKAQINDALSIQPDLQYITTPSGIYPDAFVAGLRFQLDL 115
            A STDD PQGL++FAQH+PT T G SPFP IP D LAG AYTGL+RGRD+DV GAG GWV+L+QGGTD E+MVEVFYKAQIND LSIQPDLQYI TPSG+YP A  AG+RFQLDL
Sbjct:  310 ADSTDDNPQGLSVFAQHYPTETNGNSPFPEIPQDGLAGFAYTGLLRGRDEDVIGAGIGWVELNQGGTDEELMVEVFYKAQINDNLSIQPDLQYINTPSGLYPSALAAGIRFQLDL 424

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BLAST of mRNA_M-pyrifera_M_contig110260.2152.1 vs. uniprot
Match: A0A2E2C0L5_9PLAN (Uncharacterized protein n=3 Tax=Planctomycetaceae TaxID=126 RepID=A0A2E2C0L5_9PLAN)

HSP 1 Score: 186 bits (473), Expect = 1.560e-55
Identity = 85/115 (73.91%), Postives = 96/115 (83.48%), Query Frame = 0

Query:    1 AGSTDDQPQGLTIFAQHFPTSTYGRSPFPLIPHDALAGLAYTGLIRGRDQDVTGAGAGWVDLDQGGTDSEIMVEVFYKAQINDALSIQPDLQYITTPSGIYPDAFVAGLRFQLDL 115
            AGS +D PQGL+ F QHFPT +   SPFP IPHDALAG+ YTGL R RD D+TGAGAGWVDLDQGGTD E+M+EVFYKA++ND L IQPDLQY TTPSGIYPDA VAG+RFQ +L
Sbjct:  294 AGSDEDSPQGLSAFVQHFPTYSSDNSPFPQIPHDALAGITYTGLFRNRDADITGAGAGWVDLDQGGTDQEVMIEVFYKAKVNDNLIIQPDLQYFTTPSGIYPDALVAGIRFQWEL 408

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BLAST of mRNA_M-pyrifera_M_contig110260.2152.1 vs. uniprot
Match: A0A517WUU2_9PLAN (Porin B n=2 Tax=Gimesia aquarii TaxID=2527964 RepID=A0A517WUU2_9PLAN)

HSP 1 Score: 174 bits (441), Expect = 9.700e-51
Identity = 80/115 (69.57%), Postives = 93/115 (80.87%), Query Frame = 0

Query:    1 AGSTDDQPQGLTIFAQHFPTSTYGRSPFPLIPHDALAGLAYTGLIRGRDQDVTGAGAGWVDLDQGGTDSEIMVEVFYKAQINDALSIQPDLQYITTPSGIYPDAFVAGLRFQLDL 115
            A STDD PQGL++FAQH+PT+T G S FP IP D LAG+ Y GL+RGRD+DV GAG GWV L +GGTD E MVE+FYKA+IN  LS+QPD+QYI TPSGIYP+A V GLR QLDL
Sbjct:  296 ADSTDDNPQGLSLFAQHYPTNTNGSSSFPEIPEDGLAGIVYRGLLRGRDEDVAGAGLGWVKLTEGGTDEEFMVELFYKAKINSTLSVQPDIQYINTPSGIYPNALVVGLRVQLDL 410

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BLAST of mRNA_M-pyrifera_M_contig110260.2152.1 vs. uniprot
Match: A0A5B9MLB3_9BACT (Porin B n=1 Tax=Stieleria maiorica TaxID=2795974 RepID=A0A5B9MLB3_9BACT)

HSP 1 Score: 120 bits (300), Expect = 5.870e-30
Identity = 58/111 (52.25%), Postives = 73/111 (65.77%), Query Frame = 0

Query:    5 DDQPQGLTIFAQHFPTSTYGRSPFPLIPHDALAGLAYTGLIRGRDQDVTGAGAGWVDLDQGGTDSEIMVEVFYKAQINDALSIQPDLQYITTPSGIYPDAFVAGLRFQLDL 115
            ++  QGL IF  +FP    G  P   I    + GL YTGLI GRD+DV GAG  W  L+QGGT+ E  +EVFYKA++   L++QPDLQYI+TPSGIY D+ V G R +L L
Sbjct:  305 EESVQGLGIFGAYFPRFANGAIPISSIDDALVCGLVYTGLISGRDEDVAGAGYAWAGLNQGGTNEESAIEVFYKAKLTPRLTLQPDLQYISTPSGIYSDSRVVGTRLELRL 415

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BLAST of mRNA_M-pyrifera_M_contig110260.2152.1 vs. uniprot
Match: A0A5C5Z430_9BACT (Porin B n=1 Tax=Planctomycetes bacterium CA13 TaxID=2527986 RepID=A0A5C5Z430_9BACT)

HSP 1 Score: 115 bits (288), Expect = 4.530e-28
Identity = 57/108 (52.78%), Postives = 70/108 (64.81%), Query Frame = 0

Query:    9 QGLTIFAQHFPTSTYG---RSPFPLIPHDALAGLAYTGLIRGRDQDVTGAGAGWVDLDQGGTDSEIMVEVFYKAQINDALSIQPDLQYITTPSGIYPDAFVAGLRFQL 113
            QGL IFA + P    G    SP  +I   A AG  Y GL+ GRD+DV GAG  W  L+ GGT+ E +VE FYKAQ+ D +S+QPD+QYI +PSGIY DA   GLRF +
Sbjct:  338 QGLGIFALYLPRFGGGPVTASPLEVIEESAAAGFVYRGLLPGRDEDVIGAGIAWTQLNLGGTNRETVVETFYKAQVTDTVSVQPDIQYIASPSGIYDDALTVGLRFTV 445

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BLAST of mRNA_M-pyrifera_M_contig110260.2152.1 vs. uniprot
Match: A0A5C6D7D9_9BACT (Carbohydrate-selective porin, OprB family n=1 Tax=Novipirellula artificiosorum TaxID=2528016 RepID=A0A5C6D7D9_9BACT)

HSP 1 Score: 98.6 bits (244), Expect = 1.440e-24
Identity = 45/79 (56.96%), Postives = 57/79 (72.15%), Query Frame = 0

Query:   35 ALAGLAYTGLIRGRDQDVTGAGAGWVDLDQGGTDSEIMVEVFYKAQINDALSIQPDLQYITTPSGIYPDAFVAGLRFQL 113
            A AG+ Y GL+ GRD+DV GAG  W  L+ GGT+ E +VE FYKAQ+   +S+QPD+QYI +PSGIY DA   GLRF +
Sbjct:   19 AAAGVVYRGLLPGRDEDVIGAGIAWARLNLGGTNQETVVETFYKAQVTATVSMQPDIQYIASPSGIYRDALAVGLRFTV 97

The following BLAST results are available for this feature:

BLAST of mRNA_M-pyrifera_M_contig110260.2152.1 vs. uniprot

BLAST of mRNA_M-pyrifera_M_contig110260.2152.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6I6A8X3_9PLAN	4.400e-72	94.78	Carbohydrate porin n=9 Tax=Gimesia TaxID=1649453 R...	[more]
A0A518A601_9PLAN	3.490e-66	86.09	Porin B n=2 Tax=Gimesia panareensis TaxID=2527978 ...	[more]
A0A350KB63_9PLAN	5.810e-62	79.82	Uncharacterized protein (Fragment) n=1 Tax=Plancto...	[more]
A0A517V8F1_9PLAN	3.420e-58	79.13	Porin B n=8 Tax=Gimesia TaxID=1649453 RepID=A0A517...	[more]
A0A518IC21_9PLAN	7.300e-57	76.52	Porin B n=2 Tax=Gimesia TaxID=1649453 RepID=A0A518...	[more]
A0A2E2C0L5_9PLAN	1.560e-55	73.91	Uncharacterized protein n=3 Tax=Planctomycetaceae ...	[more]
A0A517WUU2_9PLAN	9.700e-51	69.57	Porin B n=2 Tax=Gimesia aquarii TaxID=2527964 RepI...	[more]
A0A5B9MLB3_9BACT	5.870e-30	52.25	Porin B n=1 Tax=Stieleria maiorica TaxID=2795974 R...	[more]
A0A5C5Z430_9BACT	4.530e-28	52.78	Porin B n=1 Tax=Planctomycetes bacterium CA13 TaxI...	[more]
A0A5C6D7D9_9BACT	1.440e-24	56.96	Carbohydrate-selective porin, OprB family n=1 Tax=...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007049	Carbohydrate-selective porin OprB	PFAM	PF04966	OprB	coord: 8..113 e-value: 5.0E-16 score: 59.1
IPR038673	Carbohydrate-selective porin OprB superfamily	GENE3D	2.40.160.180		coord: 2..115 e-value: 5.8E-21 score: 76.9

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
M-pyrifera_M_contig110260	contig	M-pyrifera_M_contig110260:3..350 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male	2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90	2022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_M-pyrifera_M_contig110260.2152.1	mRNA_M-pyrifera_M_contig110260.2152.1	Macrocystis pyrifera P11B4 male	mRNA	M-pyrifera_M_contig110260 3..350 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_M-pyrifera_M_contig110260.2152.1 ID=prot_M-pyrifera_M_contig110260.2152.1|Name=mRNA_M-pyrifera_M_contig110260.2152.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=116bp
AGSTDDQPQGLTIFAQHFPTSTYGRSPFPLIPHDALAGLAYTGLIRGRDQ
DVTGAGAGWVDLDQGGTDSEIMVEVFYKAQINDALSIQPDLQYITTPSGI
YPDAFVAGLRFQLDL*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR007049	Carb-sel_porin_OprB
IPR038673	OprB_sf