mRNA_M-pyrifera_M_contig11015.2124.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig11015.2124.1
Unique NamemRNA_M-pyrifera_M_contig11015.2124.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig11015.2124.1 vs. uniprot
Match: D7FQ35_ECTSI (Chloride channel protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQ35_ECTSI)

HSP 1 Score: 310 bits (794), Expect = 2.020e-94
Identity = 160/214 (74.77%), Postives = 180/214 (84.11%), Query Frame = 1
Query:    1 QVLAASAAVGLSSSFAATIGGVLFSIEITTLYYDIGNYFKAFVAAISGTVAVSLVRTLAEGSAVYIERTFSDDEFKAWQYPVFAVMGVLCGFLGPFYVNVRLNLLKLARKYGKHSIRANPKRRWEYVRAATMVACVAASLTAILSFFPGKFTRHAPLVIFRELLGEEGLPPDWTSGHISSIFVALPVSFVVWVITAALGTSVTVPSGDFIQTTV 642
            QVLAAS AVGLSS+FAATIGGVLFSIEITTLYYD+GNYFKAFVAAISGTVAVS+VR LA+    YIER FS DEF+ WQYPVFA MGVLCG +GP Y+N RLN+LKL RK GKHSIRA P RRWEYVRAAT VAC+AA++TA+LSFFPG+FTR  PL  F+ LL +  L   W+SG   +IF+ALPVS V W+ITAA+GTSVTVPSGDFIQTTV
Sbjct:  745 QVLAASVAVGLSSTFAATIGGVLFSIEITTLYYDVGNYFKAFVAAISGTVAVSVVRHLADFPE-YIERDFSKDEFEVWQYPVFATMGVLCGLVGPLYINFRLNMLKLGRKLGKHSIRAVPARRWEYVRAATAVACLAATMTAVLSFFPGRFTRLTPLTTFKHLLSKGDLSSIWSSGFTDNIFIALPVSIVTWIITAAMGTSVTVPSGDFIQTTV 957          
BLAST of mRNA_M-pyrifera_M_contig11015.2124.1 vs. uniprot
Match: A0A6H5JIC8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIC8_9PHAE)

HSP 1 Score: 253 bits (647), Expect = 2.430e-75
Identity = 136/192 (70.83%), Postives = 149/192 (77.60%), Query Frame = 1
Query:    1 QVLAASAAVGLSSSFAATIGGVLFSIEITTLYYDIGNYFKAFVAAISGTVAVSLVRTLAEGSAVYIERTFSDDEFKAWQYPVFAVMGVLCGFLGPFYVNVRLNLLK------------LARKYGKHSIRANPKRRWEYVRAATMVACVAASLTAILSFFPGKFTRHAPLVIFRELLGEEGLPPDWTSGHISS 540
            QVLAAS AVGLSS+FAATIGGVLFSIEITTLYYD+GNYFKAFVAAISGTVAVS+VR LAE    YIER FS DEFK WQYPVFA MGVLCG +GP Y+N RLN+LK            L RK GKHSIR  P RRWEYVRAAT VAC+AA++TA+LSFFPG+FTR  PL  F+ELL EE L   W+SG   S
Sbjct:  750 QVLAASVAVGLSSTFAATIGGVLFSIEITTLYYDVGNYFKAFVAAISGTVAVSVVRHLAEFPE-YIERDFSKDEFKVWQYPVFATMGVLCGLVGPLYINFRLNMLKVLMLISTTNRLKLGRKLGKHSIRTVPARRWEYVRAATAVACLAAAMTAVLSFFPGRFTRLTPLTTFKELLIEEDLSSIWSSGFTDS 940          
BLAST of mRNA_M-pyrifera_M_contig11015.2124.1 vs. uniprot
Match: A0A8K1C3H4_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C3H4_PYTOL)

HSP 1 Score: 109 bits (273), Expect = 4.430e-24
Identity = 73/217 (33.64%), Postives = 121/217 (55.76%), Query Frame = 1
Query:    1 QVLAASAAVGLSSSFAATIGGVLFSIEITTLYYDIGNYFKAFVAAISGTVAVSLVRTLAEGSAVYIERT-----FSDDEFKAWQYPVFAVMGVLCGFLGPFYVNVRLNLLKLARKYGKHSIRANPKRRWEYVRAATMVACVAASLTAILSFFPGKFTRHAPLVIFRELLGEEGLPPDWTSGHISSIFVALPVSFVVWVITAALGTSVTVPSGDFIQT 636
            Q+LAA+ AVG++S+F++ IGGVLFS+E+T+ YY I NY KAF++++SG++ + +   LA+ S+  +E T          F  W+ P++ ++G L G L    V V L ++   RK  + S     K +W+   A  +     A LTA ++++PG+F R   L     L  +E LP  W    I S F +L +  + ++I   L  S+ +P+G ++ T
Sbjct:  307 QLLAAACAVGVASTFSSPIGGVLFSMEVTSTYYLISNYMKAFISSVSGSLMLQITLALADSSSKELESTAIKTSLGPVPFVMWEIPLYVILGCLIGVLAWGMV-VLLRVVAQKRKKLRTS-----KSKWKRRFATWVDPLAVAILTATVTYWPGEFARLKSLEELAILFTQEQLPESW---QIVSKFYSLAILSITYIILLPLSISLQIPTGIWLPT 514          
BLAST of mRNA_M-pyrifera_M_contig11015.2124.1 vs. uniprot
Match: A0A225WHR5_9STRA (Chloride channel protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WHR5_9STRA)

HSP 1 Score: 108 bits (271), Expect = 8.080e-24
Identity = 72/215 (33.49%), Postives = 118/215 (54.88%), Query Frame = 1
Query:    1 QVLAASAAVGLSSSFAATIGGVLFSIEITTLYYDIGNYFKAFVAAISGTVAVSLVRTLAEGSAV---YIERTFSDDEFKAWQYPVFAVMGVLCGFLGPFYVNVRLNLLKLARKYGKHSIRANPKRRWEYVRAATMVACVAASLTAILSFFPGKFTRHAPLVIFRELLGEEGLPPDWTSGHISSIFVALPVSFVVWVITAALGTSVTVPSGDFIQT 636
            Q+LAA+ AVG+SS F++ IGGVLFS+E+T+ YY + NY KAF++A+SG V + L   LA+  +     +E  F    +  W+ P++ ++G L   LG F   +   L K+A +    S      ++W+ +    +   V + LTA+L+F PGK+ +H  +     L  E  LP  W +    S + AL V F V++    L  ++ +P+G ++ T
Sbjct:  264 QMLAAACAVGVSSLFSSPIGGVLFSMEVTSTYYLMSNYIKAFISAVSGAVMLRLTLVLAKSESATQAVLETQFPASPYTIWEIPLYILLGAL---LGLFCTAMMWLLRKIAER---RSTFRKSSQKWKRLMVTWIDPFVVSILTAVLTFVPGKYAQHNSMHDLAVLFTEGELPLAWQT---VSKYYALLVLFTVFIFLLPLCITLKIPTGIWVPT 469          
BLAST of mRNA_M-pyrifera_M_contig11015.2124.1 vs. uniprot
Match: A0A5D6YQ65_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YQ65_9STRA)

HSP 1 Score: 108 bits (270), Expect = 1.120e-23
Identity = 73/217 (33.64%), Postives = 115/217 (53.00%), Query Frame = 1
Query:    1 QVLAASAAVGLSSSFAATIGGVLFSIEITTLYYDIGNYFKAFVAAISGTVAVSLVRTLA-----EGSAVYIERTFSDDEFKAWQYPVFAVMGVLCGFLGPFYVNVRLNLLKLARKYGKHSIRANPKRRWEYVRAATMVACVAASLTAILSFFPGKFTRHAPLVIFRELLGEEGLPPDWTSGHISSIFVALPVSFVVWVITAALGTSVTVPSGDFIQT 636
            Q+LAA+ AVG+SS+F+A IGGVLFS+E+T  YY + NY KAF+++++G + + L   LA     E S + +E +F    +  W+ P+FA +G + G +    V   + ++   R   K S R     RW+      +     A +TA L+FFPG+F R A +     L  +  LP  W      S F  LP+  VV  +   L  ++ +P+G ++ T
Sbjct:  341 QLLAAACAVGVSSTFSAPIGGVLFSMEVTATYYLMSNYMKAFISSVAGALMLQLTLALASNTSRERSGMILETSFRPHAYAVWEIPLFAALGAVVGLVATATVWA-VRVVAERRSAFKKSTR-----RWKQRCVEWVDPIAVAVVTAALTFFPGEFARSASMEELTALFTDAELPAKW---QFLSRFYVLPMLCVVQAVLLPLCITLRLPTGVWVPT 548          
BLAST of mRNA_M-pyrifera_M_contig11015.2124.1 vs. uniprot
Match: W2MUE4_PHYPR (Chloride channel protein n=14 Tax=Phytophthora TaxID=4783 RepID=W2MUE4_PHYPR)

HSP 1 Score: 108 bits (269), Expect = 1.500e-23
Identity = 68/218 (31.19%), Postives = 117/218 (53.67%), Query Frame = 1
Query:    1 QVLAASAAVGLSSSFAATIGGVLFSIEITTLYYDIGNYFKAFVAAISGTVAVSLVRTLAEGSA-----VYIERTFSDDEFKAWQYPVFAVMGVLCGFLGPFYVNVRLNLLKLARKYGKH-SIRANPKRRWEYVRAATMVACVAASLTAILSFFPGKFTRHAPLVIFRELLGEEGLPPDWTSGHISSIFVALPVSFVVWVITAALGTSVTVPSGDFIQT 636
            Q+LAA+ AVG+SS F++ IGGVLFS+E+T+ YY + NY KAF++A++G V + L   LA+  +       ++  F    F  W+ P++  +G + G L          ++   RK  +H S      ++W+ V    +   + + LTA+L+F PG++ RH  +     L  E  LP  W   H++S + AL +   V++    L  ++ +P+G ++ T
Sbjct:  270 QLLAAACAVGVSSLFSSPIGGVLFSMEVTSTYYLMSNYIKAFISAVAGAVMLRLTLVLAKSESNLATQAVLKTQFPASPFTIWEIPLYIFLGTVLGLLCTA-------MMWFLRKIAEHRSSFRKSSQKWKKVLVTWIDPLIVSILTAVLTFVPGEYARHNSMDDLAILFTEGELPSSW---HVTSKYYALSILSAVFMFLLPLCITLRIPTGIWVPT 477          
BLAST of mRNA_M-pyrifera_M_contig11015.2124.1 vs. uniprot
Match: A0A2D4BJM6_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BJM6_PYTIN)

HSP 1 Score: 106 bits (265), Expect = 5.120e-23
Identity = 69/218 (31.65%), Postives = 117/218 (53.67%), Query Frame = 1
Query:    1 QVLAASAAVGLSSSFAATIGGVLFSIEITTLYYDIGNYFKAFVAAISGTVAVSLVRTLAE------GSAVYIERTFSDDEFKAWQYPVFAVMGVLCGFLGPFYVNVRLNLLKLARKYGKHSIRANPKRRWEYVRAATMVACVAASLTAILSFFPGKFTRHAPLVIFRELLGEEGLPPDWTSGHISSIFVALPVSFVVWVITAALGTSVTVPSGDFIQT 636
            Q+LAA+ AVG++S+F++ IGGVLFS+E+T+ YY I NY KAF++++SG V + +  +LA+      GS   ++     + F +W+ P+F V+G L G +  F V +   L    ++    +  ++    W  V    +   + A +TA L+++PG F     L     L   + LP  W   H  S F +L V  +V+ +   L  ++ VP+G ++ T
Sbjct:  259 QLLAAACAVGVASTFSSPIGGVLFSMEVTSTYYLISNYMKAFISSVSGAVMLQVSLSLAQSSSRERGSTSILKAPNQPEVFASWELPLFVVLGALIGVVCSFMVALLRVLATKRKRLRALAAASDSSCSWNKVFVRWIDPLIVAIITAALTYWPGSFLHARALDELAVLFTGDDLPASW---HHISAFYSLGVLALVYAVLLPLCITLRVPTGVWLPT 473          
BLAST of mRNA_M-pyrifera_M_contig11015.2124.1 vs. uniprot
Match: A0A0N7L7S9_PLAHL (Chloride channel protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0N7L7S9_PLAHL)

HSP 1 Score: 106 bits (264), Expect = 6.990e-23
Identity = 69/217 (31.80%), Postives = 116/217 (53.46%), Query Frame = 1
Query:    1 QVLAASAAVGLSSSFAATIGGVLFSIEITTLYYDIGNYFKAFVAAISGTVAVSLVRTLAEGSA-----VYIERTFSDDEFKAWQYPVFAVMGVLCGFLGPFYVNVRLNLLKLARKYGKHSIRANPKRRWEYVRAATMVACVAASLTAILSFFPGKFTRHAPLVIFRELLGEEGLPPDWTSGHISSIFVALPVSFVVWVITAALGTSVTVPSGDFIQT 636
            Q+LAA+ AVG+SS F++ IGGVLFS+E+T+ YY + NY KAF++A+SG V + L   LA   A       ++  F    F  W+ P++ ++G++ G L    +     + +    + K S      +RW+Y     +   V + LTA+L++ PG++TR   +     L  +  LPP W    + S + AL V   V++    L  ++ +P+G ++ T
Sbjct:  252 QLLAAACAVGVSSLFSSPIGGVLFSMEVTSTYYLMSNYIKAFISAVSGAVMLRLTLVLANSEANLATQAVLKTHFPIRPFTIWEIPLYILLGMILGLLSTAMMWFLRKIAERRSAFRKSS------QRWKYFFVTWIDPFVVSVLTAVLTYVPGEYTRANSMDDLAILFTDGELPPAW---QVISKYYALSVLSAVFMFLLPLCITLKIPTGIWVPT 459          
BLAST of mRNA_M-pyrifera_M_contig11015.2124.1 vs. uniprot
Match: A0A6A4CHX3_9STRA (Uncharacterized protein n=2 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A4CHX3_9STRA)

HSP 1 Score: 105 bits (263), Expect = 8.250e-23
Identity = 71/218 (32.57%), Postives = 114/218 (52.29%), Query Frame = 1
Query:    1 QVLAASAAVGLSSSFAATIGGVLFSIEITTLYYDIGNYFKAFVAAISGTVAVSLVRTLAEGSA-----VYIERTFSDDEFKAWQYPVFAVMGVLCGFLGPFYVNVRLNLLKLARKYG-KHSIRANPKRRWEYVRAATMVACVAASLTAILSFFPGKFTRHAPLVIFRELLGEEGLPPDWTSGHISSIFVALPVSFVVWVITAALGTSVTVPSGDFIQT 636
            Q+LAA+ AVG+SS  ++ IGGVLFS+E+T+ YY   NY KAF++A+SG V + L   LA+  +       ++  F    F  W+ P++ ++G L G L       R  ++   R    + S      +RW+ V A  +   V A LTA+L+F PG++ +H  +     L  E  LP  W    + S + AL V   V++    L  ++ +P+G ++ T
Sbjct:  270 QLLAAACAVGVSSLCSSPIGGVLFSMEVTSTYYLTSNYIKAFISAVSGAVMLRLTLVLAQSKSNLATQAVLKTQFPASPFTIWEIPLYVLLGALLGLL-------RTAMMWFLRTVAERRSACRKSSQRWKQVLATWIDPLVVAVLTAVLTFVPGEYAQHNSMDDLAILFTEGDLPSTW---QVVSKYYALSVLSAVFMFLLPLCITLKIPTGIWVPT 477          
BLAST of mRNA_M-pyrifera_M_contig11015.2124.1 vs. uniprot
Match: H3H2K8_PHYRM (Chloride channel protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H2K8_PHYRM)

HSP 1 Score: 104 bits (260), Expect = 2.380e-22
Identity = 70/217 (32.26%), Postives = 114/217 (52.53%), Query Frame = 1
Query:    1 QVLAASAAVGLSSSFAATIGGVLFSIEITTLYYDIGNYFKAFVAAISGTVAVSLVRTLAEGSA-----VYIERTFSDDEFKAWQYPVFAVMGVLCGFLGPFYVNVRLNLLKLARKYGKHSIRANPKRRWEYVRAATMVACVAASLTAILSFFPGKFTRHAPLVIFRELLGEEGLPPDWTSGHISSIFVALPVSFVVWVITAALGTSVTVPSGDFIQT 636
            Q+LAA+ AVG+SS F++ IGGVLFS+E+T+ YY + NY KAF++A+SG + + L   LA+  A       ++  F    F  W+ P++ ++G + G L      +   L K+A +    S      + W+ V    +     A LTA+L+F PGK+ +H  +     L  E  LP  W    + S + AL V   V++    L  ++ +P+G ++ T
Sbjct:  274 QLLAAACAVGVSSLFSSPIGGVLFSMEVTSTYYLMSNYIKAFISAVSGALMLRLTLVLAQSKANLATQAVLKTQFPASPFTIWEIPLYILLGAILGLL---CTAMMWFLRKIAER---RSAFRKSSQAWKKVLVTWIDPVATAILTAVLTFVPGKYAQHNSMDDLAILFTEGELPSSW---QVVSKYYALSVLSAVFMFLLPLCITLKIPTGIWVPT 481          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig11015.2124.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FQ35_ECTSI2.020e-9474.77Chloride channel protein n=1 Tax=Ectocarpus silicu... [more]
A0A6H5JIC8_9PHAE2.430e-7570.83Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A8K1C3H4_PYTOL4.430e-2433.64Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A225WHR5_9STRA8.080e-2433.49Chloride channel protein n=1 Tax=Phytophthora mega... [more]
A0A5D6YQ65_9STRA1.120e-2333.64Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
W2MUE4_PHYPR1.500e-2331.19Chloride channel protein n=14 Tax=Phytophthora Tax... [more]
A0A2D4BJM6_PYTIN5.120e-2331.65Uncharacterized protein n=1 Tax=Pythium insidiosum... [more]
A0A0N7L7S9_PLAHL6.990e-2331.80Chloride channel protein n=1 Tax=Plasmopara halste... [more]
A0A6A4CHX3_9STRA8.250e-2332.57Uncharacterized protein n=2 Tax=Phytophthora rubi ... [more]
H3H2K8_PHYRM2.380e-2232.26Chloride channel protein n=1 Tax=Phytophthora ramo... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig11015contigM-pyrifera_M_contig11015:690..3617 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score311.6
Seed ortholog evalue2.8e-82
Seed eggNOG ortholog2880.D7FQ35
KEGG koko:K05011
KEGG TC2.A.49.2.12,2.A.49.2.13,2.A.49.2.6,2.A.49.2.7
KEGG Pathwayko04978,map04978
Hectar predicted targeting categorysignal peptide
EggNOG free text desc.voltage-gated chloride channel activity
EggNOG OGsCOG0038@1,KOG0476@2759
Ec32 ortholog descriptionChloride channel, core
Ec32 orthologEc-01_007630.1
COG Functional cat.P
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko04040
Exons5
Model size642
Cds size642
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig11015.2124.1prot_M-pyrifera_M_contig11015.2124.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig11015 690..3617 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815612.529226-CDS-M-pyrifera_M_contig11015:689..8781622815612.529226-CDS-M-pyrifera_M_contig11015:689..878Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig11015 690..878 +
1692277487.2217014-CDS-M-pyrifera_M_contig11015:689..8781692277487.2217014-CDS-M-pyrifera_M_contig11015:689..878Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig11015 690..878 +
1622815612.5407495-CDS-M-pyrifera_M_contig11015:1173..13021622815612.5407495-CDS-M-pyrifera_M_contig11015:1173..1302Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig11015 1174..1302 +
1692277487.2347107-CDS-M-pyrifera_M_contig11015:1173..13021692277487.2347107-CDS-M-pyrifera_M_contig11015:1173..1302Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig11015 1174..1302 +
1622815612.5552495-CDS-M-pyrifera_M_contig11015:1703..17931622815612.5552495-CDS-M-pyrifera_M_contig11015:1703..1793Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig11015 1704..1793 +
1692277487.2439933-CDS-M-pyrifera_M_contig11015:1703..17931692277487.2439933-CDS-M-pyrifera_M_contig11015:1703..1793Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig11015 1704..1793 +
1622815612.5704675-CDS-M-pyrifera_M_contig11015:2492..26221622815612.5704675-CDS-M-pyrifera_M_contig11015:2492..2622Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig11015 2493..2622 +
1692277487.2542481-CDS-M-pyrifera_M_contig11015:2492..26221692277487.2542481-CDS-M-pyrifera_M_contig11015:2492..2622Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig11015 2493..2622 +
1622815612.582329-CDS-M-pyrifera_M_contig11015:3513..36171622815612.582329-CDS-M-pyrifera_M_contig11015:3513..3617Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig11015 3514..3617 +
1692277487.2692633-CDS-M-pyrifera_M_contig11015:3513..36171692277487.2692633-CDS-M-pyrifera_M_contig11015:3513..3617Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig11015 3514..3617 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig11015.2124.1

>prot_M-pyrifera_M_contig11015.2124.1 ID=prot_M-pyrifera_M_contig11015.2124.1|Name=mRNA_M-pyrifera_M_contig11015.2124.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=214bp
QVLAASAAVGLSSSFAATIGGVLFSIEITTLYYDIGNYFKAFVAAISGTV
AVSLVRTLAEGSAVYIERTFSDDEFKAWQYPVFAVMGVLCGFLGPFYVNV
RLNLLKLARKYGKHSIRANPKRRWEYVRAATMVACVAASLTAILSFFPGK
FTRHAPLVIFRELLGEEGLPPDWTSGHISSIFVALPVSFVVWVITAALGT
SVTVPSGDFIQTTV
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mRNA from alignment at M-pyrifera_M_contig11015:690..3617+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig11015.2124.1 ID=mRNA_M-pyrifera_M_contig11015.2124.1|Name=mRNA_M-pyrifera_M_contig11015.2124.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=2928bp|location=Sequence derived from alignment at M-pyrifera_M_contig11015:690..3617+ (Macrocystis pyrifera P11B4 male)
CAGGTTCTGGCGGCGTCTGCTGCGGTGGGTCTGTCCAGCAGTTTCGCGGC GACGATTGGAGGCGTTCTGTTCTCGATAGAGATTACCACGCTTTACTACG ACATCGGTAATTACTTCAAGGCTTTCGTGGCGGCCATATCGGGGACGGTG GCTGTTAGCCTCGTGCGGACGCTGGCCGAGGGGTCTGCGGTGAGGGCGAA GAGGGGGGGGCTGGGATGGATAAATTATTTTTTTATTCTTTTTTTTTGGA AACGTTAATCATACAAGCTCTAGAAACAATATACCAGGTATTAAGTAATT TCACCGTGTCCCCTGATTCCGGAGATATTTCATGGTATGTACCAGCAACT CTACCCTTTGTACGCACGCACGACCATATCGATTTGCTTCGGTTTTCTTC TTTCTCAGAATGGTTGAGAGTCATCTTTGCCCCCCTTGACCCCCCCCCCC CTTGTTTTTTCTGGGCGCTCACCTACTAAAATAGGTGTACATTGAAAGGA CCTTCTCCGACGACGAATTCAAGGCCTGGCAATACCCTGTGTTCGCCGTG ATGGGCGTCTTGTGCGGCTTCCTCGGCCCCTTTTACGTGAACGTTCGTCT GAACCTTCTCAAGGTGGGAGTGAGCCTGCCGCTTCGCACCCTCCCCACTC CTCCCCCTTCGTATTGTAGGGGGGCGGGAGGGCCTGTGGTCATACGCCTA CGACGATGCGTGATAATGAGTATACCCCCCTGTGCTGCTACTGGTATACC AGGTATTTGTTATCGGGCATGCCCTACCATGGCGTGAATGCTTTCTTTTA ATAGGCATTGCCCTATATTTTCGGCGGCCGTGTGAATTAGCATCTCGCTC TGCTAACTGAGCAGTCATCGCTCGCGCGTCCCCCTCTCTCTCTCTCGTTC TGCCTCCCCCCCTCCCTCCCTCACTCCCTCCCTCCCTCCCTCACTTCCTG CCCCCCTCCCTGCCCCCCTCCCTCTTGTTTTCGTCTCTCTGGCGCGTTTT TGTGATGGAAACAGCTGGCGCGCAAGTACGGGAAACACTCGATACGAGCA AACCCCAAACGGCGCTGGGAGTACGTGCGGGCCGCAACCATGGTGGCGTG TGTGGTGAGGCGTGTTTTCTCTCTCTCCCTTTCTCTCTCTCTCTCTCGCG CGCTGGGGGGGGGTACATATCAAAGCGGGTGGAGAGGAAGAGAAAGCATG AGGGATGGAGACGCAAGACGTTCAGAAGGAGAGAGAGGGACAGATAGACA GACATAAATACGCTCGAACTCACACGGAACGAGAGAAAGCGAGTAGGTCG TGTCAACTGCGGTGTGGAGGAACAAAATCGCCACACGTGCCCGCGTTTTT GCTTGCTCGCTTTTCTGGCTGTCAGTCCGCTGTCACTAGCTGTCGTTATC TCGCGCGGTGCAACGGGTCGTTTCGGCTGCTCTAAGGGCAAAAAAGAGGG GAGAAAGAAAAGAAGATGGGAGGGCAGCCCAGAGATGAAAAACATGGATG GGGTTGTTTGTTTTTTTTCAATGATGTCTCCGGCGTGGACAAACAAACGC CAATTTTCTCCTCGCGTTTCACGTGCTTGCTTGCGTGCCGTGCTGCAAGC CTGGCGAGCCTAAGCATTCATACCAATCCGCCGGAAGCTAAACACATCAG TCAAACAAACAAACAAGCAAACAAATCAGCGCCATTTTTTGCTCGCGTTT TTGCTTCGCTTGTTTGCGTGCCGTGCCGTGCCGTGCCTCGCTCGCTTGCT CGCTTTCTTGCTGGTTGATTGGCTGGCACTCCCTGTCGTCGGGCGTTGCT TAGGCGGCGAGCCTCACGGCAATTCTCTCCTTCTTCCCCGGAAAGTTCAC GCGGCATGCCCCGTTGGTCATTTTCAGGGAACTCCTTGGCGAGGAGGGTT TGCCCCCCGACTGGACCTCGGGCCACATTTCGAGTGAGCCTTTTTTTCAT TTTGTTTTTTAAAACACGTGGGGCTGTGATATTGTTTTTTCCTCAAACCC CATATGTTGATATTGATAGTGTGATCGCGCGTGATGTACGGTAGTATCAA AACCGGACTAAATTTCGTCAAACGTATACTGGTGCTCGTTAGGTAGGCTT TGGTCGTGTGTTGATATGTGAATGGTGAATGTACTCGTTGTCCATGGTTG GGGCTGTTCAGTGAGCTATATGAACTAACGTATGCTTGGTACTCGGTATG TAAGTGTGAGTGCGGTATTTATATTCGCAACGTTTGCTCGTACTCGTTTT ACATGCTTGAGTTGTGCGGTGAGCTTGACGTGGTCATTGCTCCATGGCAC CAAAACACTAGCGTTCCAAGGCCTCCTCTCCCACAAACACCGCTGGTCTT GTCTTGTCTTGCCTTGCCTTGCCTTGCCTTGCCTTGCCTTGTCTTGTCTT GTCGTCGTCGCCTGCCTGCCTGAAACCGTCGGTGTACAACGGGAACGGCA ACGGCGCAACGGTAACGGCAATCGTAACGGAAACCGTGACCCCAACCGTA ACGGAAACGGTAACCGCAACCGCAATCCTGACGGTAACGACAACGGCGTA ACGGTAACGGCAAATCGTAACGGAAATGGTTACCACAACGGTAACGGCGA TGACAACCTCAACGGTAAACCACAACGGTAACCACAACGGTAACGGCAAC GGTAATCACGACGGTAAAATCGTAACGGCAACGGTAACGGCAATGGAAAC GGCGCAACGGCAACGGTAACGACGCAACGGCAACGTTAACGGTGCAACGG TAACGGCAATCGTGACGGCAACGGTAACCACAACGGAAACGACGATCGTA ACGGCAACGGTATCCGGTTTGCAGGCATCTTTGTGGCCCTTCCTGTGTCG TTTGTGGTGTGGGTTATTACTGCGGCCCTCGGAACGAGCGTCACCGTTCC GTCCGGCGACTTCATCCAGACTACGGTG
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig11015:690..3617+

>mRNA_M-pyrifera_M_contig11015.2124.1 ID=mRNA_M-pyrifera_M_contig11015.2124.1|Name=mRNA_M-pyrifera_M_contig11015.2124.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1284bp|location=Sequence derived from alignment at M-pyrifera_M_contig11015:690..3617+ (Macrocystis pyrifera P11B4 male)
CAGGTTCTGGCGGCGTCTGCTGCGGTGGGTCTGTCCAGCAGTTTCGCGGC
GACGATTGGAGGCGTTCTGTTCTCGATAGAGATTACCACGCTTTACTACG
ACATCGGTAATTACTTCAAGGCTTTCGTGGCGGCCATATCGGGGACGGTG
GCTGTTAGCCTCGTGCGGACGCTGGCCGAGGGGTCTGCGCAGGTTCTGGC
GGCGTCTGCTGCGGTGGGTCTGTCCAGCAGTTTCGCGGCGACGATTGGAG
GCGTTCTGTTCTCGATAGAGATTACCACGCTTTACTACGACATCGGTAAT
TACTTCAAGGCTTTCGTGGCGGCCATATCGGGGACGGTGGCTGTTAGCCT
CGTGCGGACGCTGGCCGAGGGGTCTGCGGTGTACATTGAAAGGACCTTCT
CCGACGACGAATTCAAGGCCTGGCAATACCCTGTGTTCGCCGTGATGGGC
GTCTTGTGCGGCTTCCTCGGCCCCTTTTACGTGAACGTTCGTCTGAACCT
TCTCAAGGTGTACATTGAAAGGACCTTCTCCGACGACGAATTCAAGGCCT
GGCAATACCCTGTGTTCGCCGTGATGGGCGTCTTGTGCGGCTTCCTCGGC
CCCTTTTACGTGAACGTTCGTCTGAACCTTCTCAAGCTGGCGCGCAAGTA
CGGGAAACACTCGATACGAGCAAACCCCAAACGGCGCTGGGAGTACGTGC
GGGCCGCAACCATGGTGGCGTGTGTGCTGGCGCGCAAGTACGGGAAACAC
TCGATACGAGCAAACCCCAAACGGCGCTGGGAGTACGTGCGGGCCGCAAC
CATGGTGGCGTGTGTGGCGGCGAGCCTCACGGCAATTCTCTCCTTCTTCC
CCGGAAAGTTCACGCGGCATGCCCCGTTGGTCATTTTCAGGGAACTCCTT
GGCGAGGAGGGTTTGCCCCCCGACTGGACCTCGGGCCACATTTCGAGCGG
CGAGCCTCACGGCAATTCTCTCCTTCTTCCCCGGAAAGTTCACGCGGCAT
GCCCCGTTGGTCATTTTCAGGGAACTCCTTGGCGAGGAGGGTTTGCCCCC
CGACTGGACCTCGGGCCACATTTCGAGCATCTTTGTGGCCCTTCCTGTGT
CGTTTGTGGTGTGGGTTATTACTGCGGCCCTCGGAACGAGCGTCACCGTT
CCGTCCGGCGACTTCATCCAGACTACGGTGGCATCTTTGTGGCCCTTCCT
GTGTCGTTTGTGGTGTGGGTTATTACTGCGGCCCTCGGAACGAGCGTCAC
CGTTCCGTCCGGCGACTTCATCCAGACTACGGTG
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