mRNA_M-pyrifera_M_contig11015.2124.1 (mRNA) Macrocystis pyrifera P11B4 male
|
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig11015.2124.1 vs. uniprot
Match: D7FQ35_ECTSI (Chloride channel protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQ35_ECTSI) HSP 1 Score: 310 bits (794), Expect = 2.020e-94 Identity = 160/214 (74.77%), Postives = 180/214 (84.11%), Query Frame = 1
Query: 1 QVLAASAAVGLSSSFAATIGGVLFSIEITTLYYDIGNYFKAFVAAISGTVAVSLVRTLAEGSAVYIERTFSDDEFKAWQYPVFAVMGVLCGFLGPFYVNVRLNLLKLARKYGKHSIRANPKRRWEYVRAATMVACVAASLTAILSFFPGKFTRHAPLVIFRELLGEEGLPPDWTSGHISSIFVALPVSFVVWVITAALGTSVTVPSGDFIQTTV 642
QVLAAS AVGLSS+FAATIGGVLFSIEITTLYYD+GNYFKAFVAAISGTVAVS+VR LA+ YIER FS DEF+ WQYPVFA MGVLCG +GP Y+N RLN+LKL RK GKHSIRA P RRWEYVRAAT VAC+AA++TA+LSFFPG+FTR PL F+ LL + L W+SG +IF+ALPVS V W+ITAA+GTSVTVPSGDFIQTTV
Sbjct: 745 QVLAASVAVGLSSTFAATIGGVLFSIEITTLYYDVGNYFKAFVAAISGTVAVSVVRHLADFPE-YIERDFSKDEFEVWQYPVFATMGVLCGLVGPLYINFRLNMLKLGRKLGKHSIRAVPARRWEYVRAATAVACLAATMTAVLSFFPGRFTRLTPLTTFKHLLSKGDLSSIWSSGFTDNIFIALPVSIVTWIITAAMGTSVTVPSGDFIQTTV 957
BLAST of mRNA_M-pyrifera_M_contig11015.2124.1 vs. uniprot
Match: A0A6H5JIC8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIC8_9PHAE) HSP 1 Score: 253 bits (647), Expect = 2.430e-75 Identity = 136/192 (70.83%), Postives = 149/192 (77.60%), Query Frame = 1
Query: 1 QVLAASAAVGLSSSFAATIGGVLFSIEITTLYYDIGNYFKAFVAAISGTVAVSLVRTLAEGSAVYIERTFSDDEFKAWQYPVFAVMGVLCGFLGPFYVNVRLNLLK------------LARKYGKHSIRANPKRRWEYVRAATMVACVAASLTAILSFFPGKFTRHAPLVIFRELLGEEGLPPDWTSGHISS 540
QVLAAS AVGLSS+FAATIGGVLFSIEITTLYYD+GNYFKAFVAAISGTVAVS+VR LAE YIER FS DEFK WQYPVFA MGVLCG +GP Y+N RLN+LK L RK GKHSIR P RRWEYVRAAT VAC+AA++TA+LSFFPG+FTR PL F+ELL EE L W+SG S
Sbjct: 750 QVLAASVAVGLSSTFAATIGGVLFSIEITTLYYDVGNYFKAFVAAISGTVAVSVVRHLAEFPE-YIERDFSKDEFKVWQYPVFATMGVLCGLVGPLYINFRLNMLKVLMLISTTNRLKLGRKLGKHSIRTVPARRWEYVRAATAVACLAAAMTAVLSFFPGRFTRLTPLTTFKELLIEEDLSSIWSSGFTDS 940
BLAST of mRNA_M-pyrifera_M_contig11015.2124.1 vs. uniprot
Match: A0A8K1C3H4_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C3H4_PYTOL) HSP 1 Score: 109 bits (273), Expect = 4.430e-24 Identity = 73/217 (33.64%), Postives = 121/217 (55.76%), Query Frame = 1
Query: 1 QVLAASAAVGLSSSFAATIGGVLFSIEITTLYYDIGNYFKAFVAAISGTVAVSLVRTLAEGSAVYIERT-----FSDDEFKAWQYPVFAVMGVLCGFLGPFYVNVRLNLLKLARKYGKHSIRANPKRRWEYVRAATMVACVAASLTAILSFFPGKFTRHAPLVIFRELLGEEGLPPDWTSGHISSIFVALPVSFVVWVITAALGTSVTVPSGDFIQT 636
Q+LAA+ AVG++S+F++ IGGVLFS+E+T+ YY I NY KAF++++SG++ + + LA+ S+ +E T F W+ P++ ++G L G L V V L ++ RK + S K +W+ A + A LTA ++++PG+F R L L +E LP W I S F +L + + ++I L S+ +P+G ++ T
Sbjct: 307 QLLAAACAVGVASTFSSPIGGVLFSMEVTSTYYLISNYMKAFISSVSGSLMLQITLALADSSSKELESTAIKTSLGPVPFVMWEIPLYVILGCLIGVLAWGMV-VLLRVVAQKRKKLRTS-----KSKWKRRFATWVDPLAVAILTATVTYWPGEFARLKSLEELAILFTQEQLPESW---QIVSKFYSLAILSITYIILLPLSISLQIPTGIWLPT 514
BLAST of mRNA_M-pyrifera_M_contig11015.2124.1 vs. uniprot
Match: A0A225WHR5_9STRA (Chloride channel protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WHR5_9STRA) HSP 1 Score: 108 bits (271), Expect = 8.080e-24 Identity = 72/215 (33.49%), Postives = 118/215 (54.88%), Query Frame = 1
Query: 1 QVLAASAAVGLSSSFAATIGGVLFSIEITTLYYDIGNYFKAFVAAISGTVAVSLVRTLAEGSAV---YIERTFSDDEFKAWQYPVFAVMGVLCGFLGPFYVNVRLNLLKLARKYGKHSIRANPKRRWEYVRAATMVACVAASLTAILSFFPGKFTRHAPLVIFRELLGEEGLPPDWTSGHISSIFVALPVSFVVWVITAALGTSVTVPSGDFIQT 636
Q+LAA+ AVG+SS F++ IGGVLFS+E+T+ YY + NY KAF++A+SG V + L LA+ + +E F + W+ P++ ++G L LG F + L K+A + S ++W+ + + V + LTA+L+F PGK+ +H + L E LP W + S + AL V F V++ L ++ +P+G ++ T
Sbjct: 264 QMLAAACAVGVSSLFSSPIGGVLFSMEVTSTYYLMSNYIKAFISAVSGAVMLRLTLVLAKSESATQAVLETQFPASPYTIWEIPLYILLGAL---LGLFCTAMMWLLRKIAER---RSTFRKSSQKWKRLMVTWIDPFVVSILTAVLTFVPGKYAQHNSMHDLAVLFTEGELPLAWQT---VSKYYALLVLFTVFIFLLPLCITLKIPTGIWVPT 469
BLAST of mRNA_M-pyrifera_M_contig11015.2124.1 vs. uniprot
Match: A0A5D6YQ65_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YQ65_9STRA) HSP 1 Score: 108 bits (270), Expect = 1.120e-23 Identity = 73/217 (33.64%), Postives = 115/217 (53.00%), Query Frame = 1
Query: 1 QVLAASAAVGLSSSFAATIGGVLFSIEITTLYYDIGNYFKAFVAAISGTVAVSLVRTLA-----EGSAVYIERTFSDDEFKAWQYPVFAVMGVLCGFLGPFYVNVRLNLLKLARKYGKHSIRANPKRRWEYVRAATMVACVAASLTAILSFFPGKFTRHAPLVIFRELLGEEGLPPDWTSGHISSIFVALPVSFVVWVITAALGTSVTVPSGDFIQT 636
Q+LAA+ AVG+SS+F+A IGGVLFS+E+T YY + NY KAF+++++G + + L LA E S + +E +F + W+ P+FA +G + G + V + ++ R K S R RW+ + A +TA L+FFPG+F R A + L + LP W S F LP+ VV + L ++ +P+G ++ T
Sbjct: 341 QLLAAACAVGVSSTFSAPIGGVLFSMEVTATYYLMSNYMKAFISSVAGALMLQLTLALASNTSRERSGMILETSFRPHAYAVWEIPLFAALGAVVGLVATATVWA-VRVVAERRSAFKKSTR-----RWKQRCVEWVDPIAVAVVTAALTFFPGEFARSASMEELTALFTDAELPAKW---QFLSRFYVLPMLCVVQAVLLPLCITLRLPTGVWVPT 548
BLAST of mRNA_M-pyrifera_M_contig11015.2124.1 vs. uniprot
Match: W2MUE4_PHYPR (Chloride channel protein n=14 Tax=Phytophthora TaxID=4783 RepID=W2MUE4_PHYPR) HSP 1 Score: 108 bits (269), Expect = 1.500e-23 Identity = 68/218 (31.19%), Postives = 117/218 (53.67%), Query Frame = 1
Query: 1 QVLAASAAVGLSSSFAATIGGVLFSIEITTLYYDIGNYFKAFVAAISGTVAVSLVRTLAEGSA-----VYIERTFSDDEFKAWQYPVFAVMGVLCGFLGPFYVNVRLNLLKLARKYGKH-SIRANPKRRWEYVRAATMVACVAASLTAILSFFPGKFTRHAPLVIFRELLGEEGLPPDWTSGHISSIFVALPVSFVVWVITAALGTSVTVPSGDFIQT 636
Q+LAA+ AVG+SS F++ IGGVLFS+E+T+ YY + NY KAF++A++G V + L LA+ + ++ F F W+ P++ +G + G L ++ RK +H S ++W+ V + + + LTA+L+F PG++ RH + L E LP W H++S + AL + V++ L ++ +P+G ++ T
Sbjct: 270 QLLAAACAVGVSSLFSSPIGGVLFSMEVTSTYYLMSNYIKAFISAVAGAVMLRLTLVLAKSESNLATQAVLKTQFPASPFTIWEIPLYIFLGTVLGLLCTA-------MMWFLRKIAEHRSSFRKSSQKWKKVLVTWIDPLIVSILTAVLTFVPGEYARHNSMDDLAILFTEGELPSSW---HVTSKYYALSILSAVFMFLLPLCITLRIPTGIWVPT 477
BLAST of mRNA_M-pyrifera_M_contig11015.2124.1 vs. uniprot
Match: A0A2D4BJM6_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BJM6_PYTIN) HSP 1 Score: 106 bits (265), Expect = 5.120e-23 Identity = 69/218 (31.65%), Postives = 117/218 (53.67%), Query Frame = 1
Query: 1 QVLAASAAVGLSSSFAATIGGVLFSIEITTLYYDIGNYFKAFVAAISGTVAVSLVRTLAE------GSAVYIERTFSDDEFKAWQYPVFAVMGVLCGFLGPFYVNVRLNLLKLARKYGKHSIRANPKRRWEYVRAATMVACVAASLTAILSFFPGKFTRHAPLVIFRELLGEEGLPPDWTSGHISSIFVALPVSFVVWVITAALGTSVTVPSGDFIQT 636
Q+LAA+ AVG++S+F++ IGGVLFS+E+T+ YY I NY KAF++++SG V + + +LA+ GS ++ + F +W+ P+F V+G L G + F V + L ++ + ++ W V + + A +TA L+++PG F L L + LP W H S F +L V +V+ + L ++ VP+G ++ T
Sbjct: 259 QLLAAACAVGVASTFSSPIGGVLFSMEVTSTYYLISNYMKAFISSVSGAVMLQVSLSLAQSSSRERGSTSILKAPNQPEVFASWELPLFVVLGALIGVVCSFMVALLRVLATKRKRLRALAAASDSSCSWNKVFVRWIDPLIVAIITAALTYWPGSFLHARALDELAVLFTGDDLPASW---HHISAFYSLGVLALVYAVLLPLCITLRVPTGVWLPT 473
BLAST of mRNA_M-pyrifera_M_contig11015.2124.1 vs. uniprot
Match: A0A0N7L7S9_PLAHL (Chloride channel protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0N7L7S9_PLAHL) HSP 1 Score: 106 bits (264), Expect = 6.990e-23 Identity = 69/217 (31.80%), Postives = 116/217 (53.46%), Query Frame = 1
Query: 1 QVLAASAAVGLSSSFAATIGGVLFSIEITTLYYDIGNYFKAFVAAISGTVAVSLVRTLAEGSA-----VYIERTFSDDEFKAWQYPVFAVMGVLCGFLGPFYVNVRLNLLKLARKYGKHSIRANPKRRWEYVRAATMVACVAASLTAILSFFPGKFTRHAPLVIFRELLGEEGLPPDWTSGHISSIFVALPVSFVVWVITAALGTSVTVPSGDFIQT 636
Q+LAA+ AVG+SS F++ IGGVLFS+E+T+ YY + NY KAF++A+SG V + L LA A ++ F F W+ P++ ++G++ G L + + + + K S +RW+Y + V + LTA+L++ PG++TR + L + LPP W + S + AL V V++ L ++ +P+G ++ T
Sbjct: 252 QLLAAACAVGVSSLFSSPIGGVLFSMEVTSTYYLMSNYIKAFISAVSGAVMLRLTLVLANSEANLATQAVLKTHFPIRPFTIWEIPLYILLGMILGLLSTAMMWFLRKIAERRSAFRKSS------QRWKYFFVTWIDPFVVSVLTAVLTYVPGEYTRANSMDDLAILFTDGELPPAW---QVISKYYALSVLSAVFMFLLPLCITLKIPTGIWVPT 459
BLAST of mRNA_M-pyrifera_M_contig11015.2124.1 vs. uniprot
Match: A0A6A4CHX3_9STRA (Uncharacterized protein n=2 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A4CHX3_9STRA) HSP 1 Score: 105 bits (263), Expect = 8.250e-23 Identity = 71/218 (32.57%), Postives = 114/218 (52.29%), Query Frame = 1
Query: 1 QVLAASAAVGLSSSFAATIGGVLFSIEITTLYYDIGNYFKAFVAAISGTVAVSLVRTLAEGSA-----VYIERTFSDDEFKAWQYPVFAVMGVLCGFLGPFYVNVRLNLLKLARKYG-KHSIRANPKRRWEYVRAATMVACVAASLTAILSFFPGKFTRHAPLVIFRELLGEEGLPPDWTSGHISSIFVALPVSFVVWVITAALGTSVTVPSGDFIQT 636
Q+LAA+ AVG+SS ++ IGGVLFS+E+T+ YY NY KAF++A+SG V + L LA+ + ++ F F W+ P++ ++G L G L R ++ R + S +RW+ V A + V A LTA+L+F PG++ +H + L E LP W + S + AL V V++ L ++ +P+G ++ T
Sbjct: 270 QLLAAACAVGVSSLCSSPIGGVLFSMEVTSTYYLTSNYIKAFISAVSGAVMLRLTLVLAQSKSNLATQAVLKTQFPASPFTIWEIPLYVLLGALLGLL-------RTAMMWFLRTVAERRSACRKSSQRWKQVLATWIDPLVVAVLTAVLTFVPGEYAQHNSMDDLAILFTEGDLPSTW---QVVSKYYALSVLSAVFMFLLPLCITLKIPTGIWVPT 477
BLAST of mRNA_M-pyrifera_M_contig11015.2124.1 vs. uniprot
Match: H3H2K8_PHYRM (Chloride channel protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H2K8_PHYRM) HSP 1 Score: 104 bits (260), Expect = 2.380e-22 Identity = 70/217 (32.26%), Postives = 114/217 (52.53%), Query Frame = 1
Query: 1 QVLAASAAVGLSSSFAATIGGVLFSIEITTLYYDIGNYFKAFVAAISGTVAVSLVRTLAEGSA-----VYIERTFSDDEFKAWQYPVFAVMGVLCGFLGPFYVNVRLNLLKLARKYGKHSIRANPKRRWEYVRAATMVACVAASLTAILSFFPGKFTRHAPLVIFRELLGEEGLPPDWTSGHISSIFVALPVSFVVWVITAALGTSVTVPSGDFIQT 636
Q+LAA+ AVG+SS F++ IGGVLFS+E+T+ YY + NY KAF++A+SG + + L LA+ A ++ F F W+ P++ ++G + G L + L K+A + S + W+ V + A LTA+L+F PGK+ +H + L E LP W + S + AL V V++ L ++ +P+G ++ T
Sbjct: 274 QLLAAACAVGVSSLFSSPIGGVLFSMEVTSTYYLMSNYIKAFISAVSGALMLRLTLVLAQSKANLATQAVLKTQFPASPFTIWEIPLYILLGAILGLL---CTAMMWFLRKIAER---RSAFRKSSQAWKKVLVTWIDPVATAILTAVLTFVPGKYAQHNSMDDLAILFTEGELPSSW---QVVSKYYALSVLSAVFMFLLPLCITLKIPTGIWVPT 481 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig11015.2124.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig11015.2124.1 >prot_M-pyrifera_M_contig11015.2124.1 ID=prot_M-pyrifera_M_contig11015.2124.1|Name=mRNA_M-pyrifera_M_contig11015.2124.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=214bp QVLAASAAVGLSSSFAATIGGVLFSIEITTLYYDIGNYFKAFVAAISGTVback to top mRNA from alignment at M-pyrifera_M_contig11015:690..3617+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig11015.2124.1 ID=mRNA_M-pyrifera_M_contig11015.2124.1|Name=mRNA_M-pyrifera_M_contig11015.2124.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=2928bp|location=Sequence derived from alignment at M-pyrifera_M_contig11015:690..3617+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig11015:690..3617+ >mRNA_M-pyrifera_M_contig11015.2124.1 ID=mRNA_M-pyrifera_M_contig11015.2124.1|Name=mRNA_M-pyrifera_M_contig11015.2124.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1284bp|location=Sequence derived from alignment at M-pyrifera_M_contig11015:690..3617+ (Macrocystis pyrifera P11B4 male)back to top |