mRNA_M-pyrifera_M_contig1100.2092.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig1100.2092.1 vs. uniprot
Match: A0A6H5L712_9PHAE (TRANSKETOLASE_1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L712_9PHAE) HSP 1 Score: 191 bits (486), Expect = 1.530e-60 Identity = 88/99 (88.89%), Postives = 93/99 (93.94%), Query Frame = 1
Query: 1 MNLSPSNPQWWGRDRFVLSNGHACALQYIMLHLCGFGVTMDDLKDFRQLDSVTPGHPENFVTAGIEVSTGPLGQGISNAVGMAMAERHLAATFNKPDFE 297
MN SPSNP W GRDRFVLSNGHACALQYIMLHLCG+GVTMDDLK FRQLDS+TPGHPENFVT G+EVSTGPLGQGISNAVGMA+AERHLAATFN PDF+
Sbjct: 60 MNFSPSNPDWLGRDRFVLSNGHACALQYIMLHLCGYGVTMDDLKSFRQLDSLTPGHPENFVTPGVEVSTGPLGQGISNAVGMAIAERHLAATFNTPDFQ 158
BLAST of mRNA_M-pyrifera_M_contig1100.2092.1 vs. uniprot
Match: D8LHQ1_ECTSI (Transketolase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHQ1_ECTSI) HSP 1 Score: 194 bits (492), Expect = 2.300e-56 Identity = 89/99 (89.90%), Postives = 94/99 (94.95%), Query Frame = 1
Query: 1 MNLSPSNPQWWGRDRFVLSNGHACALQYIMLHLCGFGVTMDDLKDFRQLDSVTPGHPENFVTAGIEVSTGPLGQGISNAVGMAMAERHLAATFNKPDFE 297
MN SPSNP W GRDRFVLSNGHACALQYIMLHLCG+GVTMDDLK FRQLDS+TPGHPENFVT G+EVSTGPLGQGISNAVGMA+AERHLAATFNKPDF+
Sbjct: 52 MNFSPSNPDWLGRDRFVLSNGHACALQYIMLHLCGYGVTMDDLKSFRQLDSLTPGHPENFVTPGVEVSTGPLGQGISNAVGMAIAERHLAATFNKPDFQ 150
BLAST of mRNA_M-pyrifera_M_contig1100.2092.1 vs. uniprot
Match: A0A7S3Q1S1_9STRA (Transketolase n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3Q1S1_9STRA) HSP 1 Score: 171 bits (434), Expect = 5.520e-48 Identity = 77/94 (81.91%), Postives = 86/94 (91.49%), Query Frame = 1
Query: 1 MNLSPSNPQWWGRDRFVLSNGHACALQYIMLHLCGFGVTMDDLKDFRQLDSVTPGHPENFVTAGIEVSTGPLGQGISNAVGMAMAERHLAATFN 282
MN SPSNP+WW RDRFVLSNGHAC+LQY MLHL G+G+T+DDLK+FRQL S+TPGHPENFVT G+EVSTGPLGQGISNAVG A+AERH AATFN
Sbjct: 69 MNYSPSNPEWWNRDRFVLSNGHACSLQYSMLHLAGYGLTIDDLKNFRQLGSLTPGHPENFVTKGVEVSTGPLGQGISNAVGFAVAERHFAATFN 162
BLAST of mRNA_M-pyrifera_M_contig1100.2092.1 vs. uniprot
Match: A9UUK8_MONBE (Transketolase n=1 Tax=Monosiga brevicollis TaxID=81824 RepID=A9UUK8_MONBE) HSP 1 Score: 167 bits (424), Expect = 1.130e-46 Identity = 75/99 (75.76%), Postives = 89/99 (89.90%), Query Frame = 1
Query: 1 MNLSPSNPQWWGRDRFVLSNGHACALQYIMLHLCGFGVTMDDLKDFRQLDSVTPGHPENFVTAGIEVSTGPLGQGISNAVGMAMAERHLAATFNKPDFE 297
MN +PSNP+W+ RDRFVLSNGHACALQY MLHL G+ +TMDDLK FRQ++S TPGHPEN +T GIEVSTGPLGQG+SNAVG+A+AE+HLAATFN+P F+
Sbjct: 56 MNYNPSNPRWFNRDRFVLSNGHACALQYCMLHLTGYDMTMDDLKSFRQVESRTPGHPENHLTEGIEVSTGPLGQGLSNAVGLALAEKHLAATFNRPGFD 154
BLAST of mRNA_M-pyrifera_M_contig1100.2092.1 vs. uniprot
Match: A0A8J1ZZ71_9DINO (Transketolase n=1 Tax=Amoebophrya sp. A25 TaxID=1410381 RepID=A0A8J1ZZ71_9DINO) HSP 1 Score: 166 bits (421), Expect = 3.210e-46 Identity = 77/98 (78.57%), Postives = 84/98 (85.71%), Query Frame = 1
Query: 1 MNLSPSNPQWWGRDRFVLSNGHACALQYIMLHLCGFGVTMDDLKDFRQLDSVTPGHPENFVTAGIEVSTGPLGQGISNAVGMAMAERHLAATFNKPDF 294
MN+SP +P W RDRFVLSNGHACALQYIMLHL G+GV+MDDLK FRQL S TPGHPENF T G+EV TGPLGQGI+NAVGMA+AE HLAA FNKP F
Sbjct: 68 MNISPKDPNWINRDRFVLSNGHACALQYIMLHLSGYGVSMDDLKQFRQLHSKTPGHPENFCTPGVEVCTGPLGQGITNAVGMALAESHLAARFNKPGF 165
BLAST of mRNA_M-pyrifera_M_contig1100.2092.1 vs. uniprot
Match: A0A835Z7X0_9STRA (Transketolase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7X0_9STRA) HSP 1 Score: 166 bits (419), Expect = 6.980e-46 Identity = 74/99 (74.75%), Postives = 90/99 (90.91%), Query Frame = 1
Query: 1 MNLSPSNPQWWGRDRFVLSNGHACALQYIMLHLCGFGVTMDDLKDFRQLDSVTPGHPENFVTAGIEVSTGPLGQGISNAVGMAMAERHLAATFNKPDFE 297
M+ SPS+PQW GRDRF+LSNGHACALQYIMLHL G ++MDDLK FR++DS+TPGHPENFVT GIEVSTGPLGQG++NAVG+A+AE+H+AAT+NK F+
Sbjct: 69 MSYSPSDPQWPGRDRFILSNGHACALQYIMLHLTGHSLSMDDLKSFRKVDSMTPGHPENFVTPGIEVSTGPLGQGLANAVGLAIAEKHMAATYNKEGFD 167
BLAST of mRNA_M-pyrifera_M_contig1100.2092.1 vs. uniprot
Match: A0A1Y1Z6H8_9FUNG (Transketolase n=1 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1Z6H8_9FUNG) HSP 1 Score: 161 bits (408), Expect = 1.950e-44 Identity = 73/98 (74.49%), Postives = 85/98 (86.73%), Query Frame = 1
Query: 1 MNLSPSNPQWWGRDRFVLSNGHACALQYIMLHLCGFGVTMDDLKDFRQLDSVTPGHPENFVTAGIEVSTGPLGQGISNAVGMAMAERHLAATFNKPDF 294
M +P NP+W RDRFVLSNGHACALQY++LHLCG+ V+MDDLK FRQ++S PGHPENF+TAGIEV+TGPLGQGISNAVG+AMAE + AATFNK F
Sbjct: 46 MKFNPENPKWVSRDRFVLSNGHACALQYVLLHLCGYDVSMDDLKSFRQMNSKCPGHPENFMTAGIEVTTGPLGQGISNAVGLAMAEANFAATFNKEAF 143
BLAST of mRNA_M-pyrifera_M_contig1100.2092.1 vs. uniprot
Match: F2U283_SALR5 (Transketolase n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2U283_SALR5) HSP 1 Score: 160 bits (405), Expect = 5.410e-44 Identity = 72/99 (72.73%), Postives = 85/99 (85.86%), Query Frame = 1
Query: 1 MNLSPSNPQWWGRDRFVLSNGHACALQYIMLHLCGFGVTMDDLKDFRQLDSVTPGHPENFVTAGIEVSTGPLGQGISNAVGMAMAERHLAATFNKPDFE 297
MN +P NP+W RDRFVLSNGHACALQY MLHL G+ +T+DDLK FRQ+ S TPGHPEN +T GIEVSTGPLGQGISNAVG+A++ERHLA T+N+P F+
Sbjct: 56 MNYNPGNPKWSNRDRFVLSNGHACALQYCMLHLTGYPLTIDDLKHFRQVGSKTPGHPENHITEGIEVSTGPLGQGISNAVGLALSERHLAGTYNRPGFD 154
BLAST of mRNA_M-pyrifera_M_contig1100.2092.1 vs. uniprot
Match: A0A0J8QYS2_COCIT (Transketolase n=1 Tax=Coccidioides immitis RMSCC 3703 TaxID=454286 RepID=A0A0J8QYS2_COCIT) HSP 1 Score: 149 bits (377), Expect = 6.840e-44 Identity = 65/99 (65.66%), Postives = 82/99 (82.83%), Query Frame = 1
Query: 1 MNLSPSNPQWWGRDRFVLSNGHACALQYIMLHLCGFGVTMDDLKDFRQLDSVTPGHPENFVTAGIEVSTGPLGQGISNAVGMAMAERHLAATFNKPDFE 297
M+ +P NPQW RDRFVLSNGH C LQY +LHL G+ V++DDLK+FRQLDS+TPGHPE T G+EV+TGPLGQG +NAVG+A+A++H AA FNKP ++
Sbjct: 48 MSFNPKNPQWINRDRFVLSNGHGCMLQYALLHLFGYEVSLDDLKNFRQLDSITPGHPEAHDTPGVEVTTGPLGQGFANAVGLAIAQKHTAAVFNKPGYD 146
BLAST of mRNA_M-pyrifera_M_contig1100.2092.1 vs. uniprot
Match: A0A1Y1YM21_9FUNG (Transketolase n=1 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1YM21_9FUNG) HSP 1 Score: 159 bits (401), Expect = 1.910e-43 Identity = 70/99 (70.71%), Postives = 85/99 (85.86%), Query Frame = 1
Query: 1 MNLSPSNPQWWGRDRFVLSNGHACALQYIMLHLCGFGVTMDDLKDFRQLDSVTPGHPENFVTAGIEVSTGPLGQGISNAVGMAMAERHLAATFNKPDFE 297
M +P+NP W RDRFVLSNGH+CALQY++LHL G+ VT+DDLK FRQLDS+ PGHPEN++T GIEV+TGPLGQGISNAVG+A+AE H+ A FNK DF+
Sbjct: 47 MKFNPANPSWPNRDRFVLSNGHSCALQYVLLHLLGYKVTLDDLKTFRQLDSICPGHPENYMTDGIEVTTGPLGQGISNAVGLALAEAHMEAVFNKDDFK 145 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig1100.2092.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig1100.2092.1 >prot_M-pyrifera_M_contig1100.2092.1 ID=prot_M-pyrifera_M_contig1100.2092.1|Name=mRNA_M-pyrifera_M_contig1100.2092.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=102bp MNLSPSNPQWWGRDRFVLSNGHACALQYIMLHLCGFGVTMDDLKDFRQLDback to top mRNA from alignment at M-pyrifera_M_contig1100:113..911+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig1100.2092.1 ID=mRNA_M-pyrifera_M_contig1100.2092.1|Name=mRNA_M-pyrifera_M_contig1100.2092.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=799bp|location=Sequence derived from alignment at M-pyrifera_M_contig1100:113..911+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig1100:113..911+ >mRNA_M-pyrifera_M_contig1100.2092.1 ID=mRNA_M-pyrifera_M_contig1100.2092.1|Name=mRNA_M-pyrifera_M_contig1100.2092.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=612bp|location=Sequence derived from alignment at M-pyrifera_M_contig1100:113..911+ (Macrocystis pyrifera P11B4 male)back to top |