prot_M-pyrifera_M_contig90119.20888.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig90119.20888.1
Unique Nameprot_M-pyrifera_M_contig90119.20888.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length150
Homology
BLAST of mRNA_M-pyrifera_M_contig90119.20888.1 vs. uniprot
Match: A0A5A8CRU7_CAFRO (Uncharacterized protein n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8CRU7_CAFRO)

HSP 1 Score: 95.9 bits (237), Expect = 1.440e-20
Identity = 61/144 (42.36%), Postives = 87/144 (60.42%), Query Frame = 0
Query:    9 RVKVFGSVATGFSSRSSDVDACFVGGNPITKLTAADVREEIVAEAEAEGRRVPRRIDGRTPAFRGMEKVL-RGS-RYFDFLQPIRYARVPIIKLVHRRTNREVDLCFNNVLPLRNSALLRNYCYLDAPLHRVRNLGLLLKRWAK 150
            RV ++GSVATG +S +SD+D  FVG      +TA DVR+E     E  G+   R +    P  R +E+ L +GS   F  ++ I +AR+PI++LVH  T  ++DL FN+V+ + NS LL +Y   D  L+RV  L  L+KRWAK
Sbjct:   51 RVALYGSVATGLASATSDLDCVFVGSGARASMTADDVRDEA---RERGGKSRRRGVFAAPPPMRNLERELTKGSPTAFRVVEAIGFARIPILRLVHTPTKTDIDLSFNSVVGVHNSRLLHSYVCFDM-LNRVAPLVTLVKRWAK 190          
BLAST of mRNA_M-pyrifera_M_contig90119.20888.1 vs. uniprot
Match: A0A7S0PCJ0_CAFRO (Hypothetical protein (Fragment) n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A7S0PCJ0_CAFRO)

HSP 1 Score: 94.7 bits (234), Expect = 6.180e-20
Identity = 60/144 (41.67%), Postives = 87/144 (60.42%), Query Frame = 0
Query:    9 RVKVFGSVATGFSSRSSDVDACFVGGNPITKLTAADVREEIVAEAEAEGRRVPRRIDGRTPAFRGMEKVL-RGS-RYFDFLQPIRYARVPIIKLVHRRTNREVDLCFNNVLPLRNSALLRNYCYLDAPLHRVRNLGLLLKRWAK 150
            RV ++GSVATG +S +SD+D  FVG      +TA DVR+E     E  G+   R +    P  + +E+ L +GS   F  ++ I +AR+PI++LVH  T  ++DL FN+V+ + NS LL +Y   D  L+RV  L  L+KRWAK
Sbjct:  279 RVALYGSVATGLASATSDLDCVFVGSGARASMTADDVRDEA---RERGGKSRRRGVFAAPPPMKNLERELTKGSPTAFRVVEAIGFARIPILRLVHTPTKTDIDLSFNSVVGVHNSRLLHSYVCFDM-LNRVAPLVTLVKRWAK 418          
BLAST of mRNA_M-pyrifera_M_contig90119.20888.1 vs. uniprot
Match: A0A5A8DVY1_CAFRO (Uncharacterized protein n=3 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8DVY1_CAFRO)

HSP 1 Score: 94.7 bits (234), Expect = 8.960e-20
Identity = 60/144 (41.67%), Postives = 87/144 (60.42%), Query Frame = 0
Query:    9 RVKVFGSVATGFSSRSSDVDACFVGGNPITKLTAADVREEIVAEAEAEGRRVPRRIDGRTPAFRGMEKVL-RGS-RYFDFLQPIRYARVPIIKLVHRRTNREVDLCFNNVLPLRNSALLRNYCYLDAPLHRVRNLGLLLKRWAK 150
            RV ++GSVATG +S +SD+D  FVG      +TA DVR+E     E  G+   R +    P  + +E+ L +GS   F  ++ I +AR+PI++LVH  T  ++DL FN+V+ + NS LL +Y   D  L+RV  L  L+KRWAK
Sbjct:  275 RVALYGSVATGLASATSDLDCVFVGSGARASMTADDVRDEA---RERGGKSRRRGVFAAPPPMKNLERELTKGSPTAFRVVEAIGFARIPILRLVHTPTKTDIDLSFNSVVGVHNSRLLHSYVCFDM-LNRVAPLVTLVKRWAK 414          
BLAST of mRNA_M-pyrifera_M_contig90119.20888.1 vs. uniprot
Match: A0A196SA54_BLAHN (Pre-mRNA processing factor 38 n=1 Tax=Blastocystis sp. subtype 1 (strain ATCC 50177 / NandII) TaxID=478820 RepID=A0A196SA54_BLAHN)

HSP 1 Score: 70.9 bits (172), Expect = 2.040e-11
Identity = 44/149 (29.53%), Postives = 77/149 (51.68%), Query Frame = 0
Query:    2 KEYDREARVKVFGSVATGFSSRSSDVDACFVGGNPITKLTAADVREEIVAEAEAEGRRVPRRIDGRTPAFRGMEKVLRGSRYFDFLQPIRYARVPIIKLVHRRTNREVDLCFNNVLPLRNSALLRNYCYLDAPLHRVRNLGLLLKRWAK 150
            K ++R   + ++GS   GF +  SD+D C +  + I +    ++ +E+ A  E                   ME++ +   +         AR+P+I+     T+ + DLCFNN+LP+RN+ LL+ Y ++D    RVR LG+++K+WAK
Sbjct:  566 KRFERSV-INIYGSSNNGFGTDGSDIDLCLIDPS-IDREKIMEIADEVAAILEE----------------MHMEEIDKSRLH---------ARIPVIRFEDPVTHIQSDLCFNNILPIRNTLLLKTYSFIDP---RVRILGIIIKKWAK 684          
BLAST of mRNA_M-pyrifera_M_contig90119.20888.1 vs. uniprot
Match: A0A812N6T5_9DINO (TUT4 protein n=1 Tax=Symbiodinium natans TaxID=878477 RepID=A0A812N6T5_9DINO)

HSP 1 Score: 64.7 bits (156), Expect = 2.990e-9
Identity = 47/144 (32.64%), Postives = 67/144 (46.53%), Query Frame = 0
Query:    7 EARVKVFGSVATGFSSRSSDVDACFVGGNPITKLTAADVREEIVAEAEAEGRRVPRRIDGRTPAFRGMEKVLRGSRYFDFLQPIRYARVPIIKLVHRRTNREVDLCFNNVLPLRNSALLRNYCYLDAPLHRVRNLGLLLKRWAK 150
            +  V+++GS + G  + +SD+D  F G     K  A  + ++  + A+  G                          FD +  I  A +P++KL   + N EVDLC NN L +RNSALL  YC  D    RV  LG L+K WAK
Sbjct:   56 DGAVQMYGSFSNGIKTCTSDLDFTFRGSTD--KQAAVSLLQKFASCAKTFG--------------------------FDNITTIFQAHLPLLKLTDTKDNIEVDLCVNNELGIRNSALLGAYCKYDV---RVLQLGRLVKDWAK 168          
BLAST of mRNA_M-pyrifera_M_contig90119.20888.1 vs. uniprot
Match: UPI0007114984 (RNA polymerase GLD2 n=1 Tax=Blastocystis sp. subtype 4 TaxID=944170 RepID=UPI0007114984)

HSP 1 Score: 64.3 bits (155), Expect = 3.820e-9
Identity = 40/139 (28.78%), Postives = 68/139 (48.92%), Query Frame = 0
Query:   10 VKVFGSVATGFSSRSSDVDACFVGGNPITKLTAADVREEIVAEAEAEGRRVPRRIDGRTPAFRGMEKVLRGSRYFDFLQPIRYARVPIIKLVHRRTNREVDLCFNNVLPLRNSALLRNYCYLDAPLHRVRNLGLLLKRW 148
            + ++GS   GF +  SD+D C V     T        +E++  A+                   + K L      +  +   +AR+P+I+     T+ + DLCFNN+LP+RN+ LL+ Y ++D    RVR LG+++K+W
Sbjct:  678 ISIYGSSNNGFGTDGSDIDLCLVDKTIKT--------DEVLGIADE------------------VCKALESLEMLEIDKSRLHARIPVIRFEDPITHIQCDLCFNNILPIRNTFLLKTYSFVDK---RVRVLGIIIKKW 787          
BLAST of mRNA_M-pyrifera_M_contig90119.20888.1 vs. uniprot
Match: UPI0003593B81 (poly(A) RNA polymerase GLD2 n=1 Tax=Aplysia californica TaxID=6500 RepID=UPI0003593B81)

HSP 1 Score: 62.8 bits (151), Expect = 1.180e-8
Identity = 47/144 (32.64%), Postives = 72/144 (50.00%), Query Frame = 0
Query:    9 RVKVFGSVATGFSSRSSDVDACFVGGNPITKLTAADVREEIVAEAEAEGRRVPRRIDGRTPAFRGMEKVLRGSRYFDFLQP--IRYARVPIIKLVHRRTNREVDLCFNNVLPLRNSALLRNYCYLDAPLHRVRNLGLLLKRWAK 150
            R+ + GS  TGF+++SSDVD CF+                 ++E E         ID +  A   +  + +      F++   +  A+VPI+K   R +  E DL  NN + +RN+ LLR+Y Y+D    RVR L L +KRWA+
Sbjct:  158 RLFIVGSSMTGFATKSSDVDMCFM-----------------ISEKE---------IDQKGDATFILSLIAKALGRCSFVRSPLVIRAKVPILKFEDRNSGVECDLNINNTIGIRNTHLLRHYAYMD---WRVRPLMLFIKRWAR 272          
BLAST of mRNA_M-pyrifera_M_contig90119.20888.1 vs. uniprot
Match: A0A7S2QC11_9DINO (Hypothetical protein (Fragment) n=1 Tax=Brandtodinium nutricula TaxID=1333877 RepID=A0A7S2QC11_9DINO)

HSP 1 Score: 62.4 bits (150), Expect = 1.640e-8
Identity = 49/147 (33.33%), Postives = 77/147 (52.38%), Query Frame = 0
Query:    9 RVKVFGSVATGFSSRSSDVDACFVGGNPITK-----LTAADVREEIVAEAEAEGRRVPRRIDGRTPAFRGMEKVLRGSRYFDFLQPIRYARVPIIKLVHRRTNREVDLCFNNVLPLRNSALLRNYCYLDAPLHRVRNLGLLLKRWAK 150
            R+++FGS A GF +R SD+DA  +  +  T      L++A++ +E +A    E            P F  +++VL  S             +PI+KL ++ +  +VDL   N   L+N+ LLR Y YLD    RVR+LG+L+K WA+
Sbjct:  144 RLELFGSAANGFGTRDSDIDATCIEESSSTDGATGALSSANILKERLAPLIREH-----------PQFFIVDEVLTAS-------------IPILKLRYKDSI-DVDLSCRNADALQNTRLLRGYAYLD---ERVRDLGILVKLWAR 262          
BLAST of mRNA_M-pyrifera_M_contig90119.20888.1 vs. uniprot
Match: A0A0P1A4S4_PLAHL (S-M checkpoint control protein CID1 and related nucleotidyltransferases n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1A4S4_PLAHL)

HSP 1 Score: 60.1 bits (144), Expect = 1.170e-7
Identity = 33/60 (55.00%), Postives = 39/60 (65.00%), Query Frame = 0
Query:   93 ARVPIIKLVHRRTNREVD--LCFNNVLPLRNSALLRNYCYLDAPLHRVRNLGLLLKRWAK 150
            ARVPII+ +H R  +E D  LCF NVL  RN+ LLR Y   D    R RNLGL++K WAK
Sbjct:  534 ARVPIIRFLHTRRGQEYDCDLCFENVLATRNTPLLRAYAAFD---ERARNLGLVVKHWAK 590          
BLAST of mRNA_M-pyrifera_M_contig90119.20888.1 vs. uniprot
Match: A0A7J7KAP4_BUGNE (CCHC-type domain-containing protein n=1 Tax=Bugula neritina TaxID=10212 RepID=A0A7J7KAP4_BUGNE)

HSP 1 Score: 59.7 bits (143), Expect = 1.470e-7
Identity = 49/157 (31.21%), Postives = 76/157 (48.41%), Query Frame = 0
Query:    1 RKEYDREARVKVFGSVATGFSSRSSDVDAC--FVGGNPIT-----KLTAADVREEIVAEAEAEGRRVPRRIDGRTPAFRGMEKVLRGSRYFDFLQPIRYARVPIIKLVHRRTNREVDLCFNNVLPLRNSALLRNYCYLDAPLHRVRNLGLLLKRWAK 150
            R++Y R+AR++++GS   GF + SSD+D C  F G    T     +  AAD+     +  +       R+I       R + K+L    +   + P+ +A+VPI+K    +   E DL   NVL  RN+ +L  Y  +D    RVR LG   K + K
Sbjct:  118 RRQY-RDARLELYGSSRNGFGTGSSDLDICMTFTGDWEPTCILCCRYCAADIVLHFCSPEDT------RQI------IRNVSKLLYSVDHLRDINPLLFAKVPIVKFSSLKYRLETDLSLYNVLAKRNTKMLYRYSQID---ERVRTLGYAAKEFVK 258          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig90119.20888.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 16
Match NameE-valueIdentityDescription
A0A5A8CRU7_CAFRO1.440e-2042.36Uncharacterized protein n=1 Tax=Cafeteria roenberg... [more]
A0A7S0PCJ0_CAFRO6.180e-2041.67Hypothetical protein (Fragment) n=1 Tax=Cafeteria ... [more]
A0A5A8DVY1_CAFRO8.960e-2041.67Uncharacterized protein n=3 Tax=Cafeteria roenberg... [more]
A0A196SA54_BLAHN2.040e-1129.53Pre-mRNA processing factor 38 n=1 Tax=Blastocystis... [more]
A0A812N6T5_9DINO2.990e-932.64TUT4 protein n=1 Tax=Symbiodinium natans TaxID=878... [more]
UPI00071149843.820e-928.78RNA polymerase GLD2 n=1 Tax=Blastocystis sp. subty... [more]
UPI0003593B811.180e-832.64poly(A) RNA polymerase GLD2 n=1 Tax=Aplysia califo... [more]
A0A7S2QC11_9DINO1.640e-833.33Hypothetical protein (Fragment) n=1 Tax=Brandtodin... [more]
A0A0P1A4S4_PLAHL1.170e-755.00S-M checkpoint control protein CID1 and related nu... [more]
A0A7J7KAP4_BUGNE1.470e-731.21CCHC-type domain-containing protein n=1 Tax=Bugula... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002934Polymerase, nucleotidyl transferase domainPFAMPF01909NTP_transf_2coord: 5..116
e-value: 8.4E-6
score: 26.0
NoneNo IPR availableGENE3D3.30.460.10coord: 1..130
e-value: 8.7E-22
score: 79.3
NoneNo IPR availablePANTHERPTHR12271:SF40POLY(A) RNA POLYMERASE GLD2coord: 3..150
NoneNo IPR availablePANTHERPTHR12271POLY A POLYMERASE CID PAP -RELATEDcoord: 3..150
NoneNo IPR availableSUPERFAMILY81301Nucleotidyltransferasecoord: 3..129

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig90119contigM-pyrifera_M_contig90119:6..455 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig90119.20888.1mRNA_M-pyrifera_M_contig90119.20888.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig90119 6..455 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig90119.20888.1 ID=prot_M-pyrifera_M_contig90119.20888.1|Name=mRNA_M-pyrifera_M_contig90119.20888.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=150bp
RKEYDREARVKVFGSVATGFSSRSSDVDACFVGGNPITKLTAADVREEIV
AEAEAEGRRVPRRIDGRTPAFRGMEKVLRGSRYFDFLQPIRYARVPIIKL
VHRRTNREVDLCFNNVLPLRNSALLRNYCYLDAPLHRVRNLGLLLKRWAK
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002934Polymerase_NTP_transf_dom