prot_M-pyrifera_M_contig90109.20884.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig90109.20884.1
Unique Nameprot_M-pyrifera_M_contig90109.20884.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length221
Homology
BLAST of mRNA_M-pyrifera_M_contig90109.20884.1 vs. uniprot
Match: A0A507DUD2_9FUNG (DNA_MISMATCH_REPAIR_2 domain-containing protein n=1 Tax=Powellomyces hirtus TaxID=109895 RepID=A0A507DUD2_9FUNG)

HSP 1 Score: 130 bits (326), Expect = 4.800e-31
Identity = 71/187 (37.97%), Postives = 115/187 (61.50%), Query Frame = 0
Query:   37 IPAEVLVCVGVLVAHLSQFGLEGILRLTDAFRSFAEAATLEMNATAVQQLELLESQDLGFLQAGQAASSRRGSLLAVVDRTRTAFGGRLLRRWLLHPLCSVAAIGRRHAAVEELLT--ARDGPAILVARVRGALERLPDLERGVCRLYYNKCAPAEFFAVMKAFLRLCTSLPTAAQARASGLSSPLL 221
            +P  ++ C+  L+ +L+QFGLE +LRLT +F  FA  A + +NA  +  LE+ ++         Q   + +GSLL ++D T+T FG RL+++W+  PL  +  + +R  AVEELL   A++ P  LV R++G + +LPDLER + R++Y +CAP+E +  + AF ++ TS+   A  R    +SPLL
Sbjct:  509 LPRRIITCLAALLKYLTQFGLENVLRLTKSFSPFASVAHMVLNANTLSSLEIFQN---------QTDYTEKGSLLWILDHTKTKFGRRLIKKWIGRPLVQIEQLQQRIDAVEELLVEDAKENP--LVRRIKGLVCQLPDLERSIVRIHYGRCAPSELYNTLLAFEKITTSVTPDAADR---FTSPLL 681          
BLAST of mRNA_M-pyrifera_M_contig90109.20884.1 vs. uniprot
Match: A0A7S4PJ16_GUITH (Hypothetical protein n=1 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4PJ16_GUITH)

HSP 1 Score: 125 bits (315), Expect = 1.390e-29
Identity = 78/186 (41.94%), Postives = 115/186 (61.83%), Query Frame = 0
Query:   36 RIPAEVLVCVGVLVAHLSQFGLEGILRLTDAFRSFAEAATLEMNATAVQQLELLESQDLGFLQAGQAASSRRGSLLAVVDRTRTAFGGRLLRRWLLHPLCSVAAIGRRHAAVEELLTARDGPAILVARVRGALERLPDLERGVCRLYYNKCAPAEFFAVMKAFLRLCTSLPTAAQARASGLSSPLL 221
            ++PA V+ C+G L+ +L +F LE +L+LT  F  F+  + ++++++ +  LELL +Q+           S  GSLL ++ +TRTAFG RLLR+W+ HPL     I  RH AVEEL+     PA L   ++  L  LPDLER + RL+Y+K AP E   ++K FL+L T L  A +A++S LSS LL
Sbjct:  359 QLPAAVISCLGGLLHYLKEFKLESVLQLTTNFWKFSSPSHMQLSSSVLSNLELLSTQE----------GSEHGSLLWLLKQTRTAFGARLLRQWITHPLLDKERIVARHEAVEELML---DPAPL-DELQQQLRGLPDLERALARLHYHKSAPNELLLLLKTFLQLSTLLKDA-KAQSSQLSSSLL 529          
BLAST of mRNA_M-pyrifera_M_contig90109.20884.1 vs. uniprot
Match: A0A8C6M718_NOTFU (MutS homolog 3 (E. coli) n=1 Tax=Nothobranchius furzeri TaxID=105023 RepID=A0A8C6M718_NOTFU)

HSP 1 Score: 124 bits (312), Expect = 3.290e-29
Identity = 79/226 (34.96%), Postives = 129/226 (57.08%), Query Frame = 0
Query:    3 VRLERH--SDFDHQRNMARVQRFFA----EDAEARARLERIPAEVLVCVGVLVAHLSQFGLEGILRLTDAFRSFA-EAATLEMNATAVQQLELLESQDLGFLQAGQAASSRRGSLLAVVDRTRTAFGGRLLRRWLLHPLCSVAAIGRRHAAVEELLTARDGPAILVARVRGALERLPDLERGVCRLYYNKCAPAEFFAVMKAFLRLCTSLPTAAQARASGLSSPLL 221
            VR+E+   + F+    +  V RFF     ED+ + + +  + + V+ C+G L+ +L +F LE +LR   +F+  + E+  + +NAT ++ LE+L +Q  G +         +GSLL V+D TRTAFG RL+R+W+  PL  + +I +R  AV+E++   +  ++ +  VR  L  LPDLERG+C +Y+ K +  EF+ V     RL   L +   A  S +SSPLL
Sbjct:  313 VRIEKRDSAQFEFSAAVVTVVRFFGHAQEEDSRSLSSVASLESPVVCCLGPLIQYLQEFNLERVLRNESSFQRLSCESEGVTLNATTLRNLEILTNQTDGRV---------KGSLLWVLDHTRTAFGRRLMRKWVSRPLTDLHSISQRQEAVQEIM---ESDSLTLNSVRALLSHLPDLERGICSIYHKKSSTQEFYLVSSCLSRLGLELQSLLPAIRSQISSPLL 526          
BLAST of mRNA_M-pyrifera_M_contig90109.20884.1 vs. uniprot
Match: A0A0L0H3Q5_SPIPD (DNA mismatch repair protein n=2 Tax=Spizellomyces TaxID=4815 RepID=A0A0L0H3Q5_SPIPD)

HSP 1 Score: 123 bits (308), Expect = 1.230e-28
Identity = 64/177 (36.16%), Postives = 105/177 (59.32%), Query Frame = 0
Query:   28 AEARARLERIPAEVLVCVGVLVAHLSQFGLEGILRLTDAFRSFAEAATLEMNATAVQQLELLESQDLGFLQAGQAASSRRGSLLAVVDRTRTAFGGRLLRRWLLHPLCSVAAIGRRHAAVEELLTARDGPAILVARVRGALERLPDLERGVCRLYYNKCAPAEFFAVMKAFLRLCTS 204
            AE  ++   +P  V++C+  L+ +L QFGLE ILRLT  F +FA  A + +NA  +  LE+  +         Q     +GSLL ++D T+T FG RLL++W+  PL  +  + +R  AVEE++       + + R+RG + +LPDLE+ VCR++Y +C+P+E    + AF ++ +S
Sbjct:  506 AELYSQALSLPRRVIICLAALLKYLVQFGLEDILRLTKFFTAFASVAHMVLNANTLNSLEIFRN---------QTDFEEKGSLLWILDHTKTKFGQRLLKKWIGRPLVQLPDLQKRIDAVEEIIQGDAQGNVFIQRMRGLICQLPDLEKSVCRIHYGRCSPSELNNTLLAFEKIGSS 673          
BLAST of mRNA_M-pyrifera_M_contig90109.20884.1 vs. uniprot
Match: A0A1A8DFW2_9TELE (MutS homolog 3 (Fragment) n=1 Tax=Nothobranchius kadleci TaxID=1051664 RepID=A0A1A8DFW2_9TELE)

HSP 1 Score: 121 bits (304), Expect = 3.930e-28
Identity = 71/197 (36.04%), Postives = 116/197 (58.88%), Query Frame = 0
Query:   26 EDAEARARLERIPAEVLVCVGVLVAHLSQFGLEGILRLTDAFRSFA-EAATLEMNATAVQQLELLESQDLGFLQAGQAASSRRGSLLAVVDRTRTAFGGRLLRRWLLHPLCSVAAIGRRHAAVEELLTARDGPAILVARVRGALERLPDLERGVCRLYYNKCAPAEFFAVMKAFLRLCTSLPTAAQARASGLSSPLL 221
            ED+ + + +  + + V+ C+G L+ +L +F LE +LR   +F+  + E+  + +NAT ++ LE+L +Q  G +         +GSLL V+D TRTAFG RL+R+W+  PL  + +I +R  AV+E++   +  ++ +  VR  L  LPDLERG+C +Y+ K +  EF+ V     RL   L +   A  S +SSPLL
Sbjct:  184 EDSRSLSSVASMESPVVCCLGPLIQYLQEFNLERVLRNESSFQRLSCESEGVTLNATTLRNLEILTNQTDGRV---------KGSLLWVLDHTRTAFGRRLMRKWVSRPLTDLHSISQRQEAVQEIM---ESDSLTLNSVRALLSHLPDLERGICSIYHKKSSTQEFYLVSSCLSRLGLELQSLLPAIRSQISSPLL 368          
BLAST of mRNA_M-pyrifera_M_contig90109.20884.1 vs. uniprot
Match: A0A1A8CZT0_9TELE (DNA mismatch repair protein n=18 Tax=Nothobranchius TaxID=28779 RepID=A0A1A8CZT0_9TELE)

HSP 1 Score: 121 bits (304), Expect = 4.160e-28
Identity = 71/197 (36.04%), Postives = 116/197 (58.88%), Query Frame = 0
Query:   26 EDAEARARLERIPAEVLVCVGVLVAHLSQFGLEGILRLTDAFRSFA-EAATLEMNATAVQQLELLESQDLGFLQAGQAASSRRGSLLAVVDRTRTAFGGRLLRRWLLHPLCSVAAIGRRHAAVEELLTARDGPAILVARVRGALERLPDLERGVCRLYYNKCAPAEFFAVMKAFLRLCTSLPTAAQARASGLSSPLL 221
            ED+ + + +  + + V+ C+G L+ +L +F LE +LR   +F+  + E+  + +NAT ++ LE+L +Q  G +         +GSLL V+D TRTAFG RL+R+W+  PL  + +I +R  AV+E++   +  ++ +  VR  L  LPDLERG+C +Y+ K +  EF+ V     RL   L +   A  S +SSPLL
Sbjct:  453 EDSRSLSSVASMESPVVCCLGPLIQYLQEFNLERVLRNESSFQRLSCESEGVTLNATTLRNLEILTNQTDGRV---------KGSLLWVLDHTRTAFGRRLMRKWVSRPLTDLHSISQRQEAVQEIM---ESDSLTLNSVRALLSHLPDLERGICSIYHKKSSTQEFYLVSSCLSRLGLELQSLLPAIRSQISSPLL 637          
BLAST of mRNA_M-pyrifera_M_contig90109.20884.1 vs. uniprot
Match: A0A8C5FGK2_GADMO (MutS homolog 3 (E. coli) n=8 Tax=Gadus morhua TaxID=8049 RepID=A0A8C5FGK2_GADMO)

HSP 1 Score: 119 bits (299), Expect = 1.900e-27
Identity = 80/218 (36.70%), Postives = 120/218 (55.05%), Query Frame = 0
Query:    9 SDFDHQRNMARVQRFFAEDAEARAR----LERIPAEVLVCVGVLVAHLSQFGLEGILRLTDAFRSFA-EAATLEMNATAVQQLELLESQDLGFLQAGQAASSRRGSLLAVVDRTRTAFGGRLLRRWLLHPLCSVAAIGRRHAAVEELLTARDGPAILVARVRGALERLPDLERGVCRLYYNKCAPAEFFAVMKAFLRLCTSLPTAAQARASGLSSPLL 221
            ++F+    M  V  F+    +  +R    +  + ++V+ C+G L+ +L +F LE +L    +FR  + E+  L ++AT ++ LE+  +Q  G L         RGSLL V+D TRTAFG RLLRRW+  PL  + +I  R  AV E+L + D  A+  A +R  L  LPDLERG+C +Y+ KC+  EF+ +  +  RL   L     A  S LSS LL
Sbjct:  303 AEFEFPSAMNTVTEFYCNSPDTGSRSLSSVASLESQVICCLGPLIQYLREFNLERVLLNDSSFRCLSTESQGLALSATTLRNLEIFSNQTDGGL---------RGSLLWVLDHTRTAFGRRLLRRWVSQPLTDLRSISDRQDAVCEILQS-DSAAL--AAIRSLLVHLPDLERGICSIYHTKCSTQEFYLICSSLSRLGLELKALIPAIQSQLSSSLL 508          
BLAST of mRNA_M-pyrifera_M_contig90109.20884.1 vs. uniprot
Match: A0A669DVK0_ORENI (MutS homolog 3 (E. coli) n=1 Tax=Oreochromis niloticus TaxID=8128 RepID=A0A669DVK0_ORENI)

HSP 1 Score: 119 bits (297), Expect = 3.540e-27
Identity = 76/226 (33.63%), Postives = 127/226 (56.19%), Query Frame = 0
Query:    3 VRLERH--SDFDHQRNMARVQRFF----AEDAEARARLERIPAEVLVCVGVLVAHLSQFGLEGILRLTDAFRSFA-EAATLEMNATAVQQLELLESQDLGFLQAGQAASSRRGSLLAVVDRTRTAFGGRLLRRWLLHPLCSVAAIGRRHAAVEELLTARDGPAILVARVRGALERLPDLERGVCRLYYNKCAPAEFFAVMKAFLRLCTSLPTAAQARASGLSSPLL 221
            VR+ER   ++F+    M  +  F+    A+ + + + +  + + V+ C+G L+ +L +F LE +LR   +FR    E+  + ++A+ ++ LE+L +Q  G         S +GSLL V+D TRT FG RL+R+W+  PL  + +I  R  AV+E+L   +  ++ +  +R  L RLPDLERG+C +Y+ K +  EF+ +  +  RL   L T   A  S +SS LL
Sbjct:  339 VRVERRDSAEFEFASAMNTLTSFYCHTQAKGSRSLSSVASLESPVISCLGPLIQYLQEFNLERVLRSESSFRRLTCESEIMTLSASTLRNLEILNNQTDG---------SVKGSLLWVLDHTRTPFGRRLMRKWVSQPLTDLQSISERQDAVQEIL---ESDSLTLNSIRSLLSRLPDLERGICSIYHKKSSTQEFYVISSSLSRLGLELQTLLPAMRSQISSVLL 552          
BLAST of mRNA_M-pyrifera_M_contig90109.20884.1 vs. uniprot
Match: UPI0006AAF00F (DNA mismatch repair protein Msh3 n=1 Tax=Pundamilia nyererei TaxID=303518 RepID=UPI0006AAF00F)

HSP 1 Score: 118 bits (296), Expect = 4.810e-27
Identity = 77/226 (34.07%), Postives = 126/226 (55.75%), Query Frame = 0
Query:    3 VRLERH--SDFDHQRNMARVQRFF----AEDAEARARLERIPAEVLVCVGVLVAHLSQFGLEGILRLTDAFRSFA-EAATLEMNATAVQQLELLESQDLGFLQAGQAASSRRGSLLAVVDRTRTAFGGRLLRRWLLHPLCSVAAIGRRHAAVEELLTARDGPAILVARVRGALERLPDLERGVCRLYYNKCAPAEFFAVMKAFLRLCTSLPTAAQARASGLSSPLL 221
            VR+ER   ++F+    M  V  F+    A+ + + + +  + + V+ C+G+L+ +L +F LE +LR   +FR    E+  + ++A  ++ LE+L +Q  G         S +GSLL V+D TRT FG RL+R+W+  PL  + +I  R  AV+E+L   +  ++ +  +R  L RLPDLERG+C +Y+ K +  EF+ +     RL   L T   A  S +SS LL
Sbjct:  442 VRVERRDSAEFEFASAMNTVTSFYCHIQAKGSRSLSSVASLESPVISCLGLLIQYLQEFNLERVLRSESSFRRLTCESEIMTLSAGTLRNLEILNNQTDG---------SVKGSLLWVLDHTRTPFGRRLMRKWVSQPLTDLQSISERQDAVQEIL---ESDSLTLNSIRSLLSRLPDLERGICSIYHKKSSTQEFYLITSNLSRLGLELQTLLPAMRSQISSGLL 655          
BLAST of mRNA_M-pyrifera_M_contig90109.20884.1 vs. uniprot
Match: A0A3P8PKS1_ASTCA (DNA mismatch repair protein n=22 Tax=Cichlidae TaxID=8113 RepID=A0A3P8PKS1_ASTCA)

HSP 1 Score: 118 bits (296), Expect = 4.890e-27
Identity = 77/226 (34.07%), Postives = 126/226 (55.75%), Query Frame = 0
Query:    3 VRLERH--SDFDHQRNMARVQRFF----AEDAEARARLERIPAEVLVCVGVLVAHLSQFGLEGILRLTDAFRSFA-EAATLEMNATAVQQLELLESQDLGFLQAGQAASSRRGSLLAVVDRTRTAFGGRLLRRWLLHPLCSVAAIGRRHAAVEELLTARDGPAILVARVRGALERLPDLERGVCRLYYNKCAPAEFFAVMKAFLRLCTSLPTAAQARASGLSSPLL 221
            VR+ER   ++F+    M  V  F+    A+ + + + +  + + V+ C+G L+ +L +F LE +LR   +FR    E+  + ++A  ++ LE+L +Q  G         S +GSLL V+D TRT FG RL+R+W+  PL  + +I  R  AV+E+L   +  ++ +  +R  L RLPDLERG+C +Y+ K +  EF+ +  +  RL   L T   A  S +SS LL
Sbjct:  442 VRVERRDSAEFEFASAMNTVTSFYCHIQAKGSRSLSSVASLESPVISCLGPLIQYLQEFNLERVLRSESSFRRLTCESEIMTLSAGTLRNLEILNNQTDG---------SVKGSLLWVLDHTRTPFGRRLMRKWVSQPLTDLQSISERQDAVQEIL---ESDSLTLNSIRSLLSRLPDLERGICSIYHKKSSTQEFYLISSSLSRLGLELQTLQPAMRSQISSGLL 655          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig90109.20884.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A507DUD2_9FUNG4.800e-3137.97DNA_MISMATCH_REPAIR_2 domain-containing protein n=... [more]
A0A7S4PJ16_GUITH1.390e-2941.94Hypothetical protein n=1 Tax=Guillardia theta TaxI... [more]
A0A8C6M718_NOTFU3.290e-2934.96MutS homolog 3 (E. coli) n=1 Tax=Nothobranchius fu... [more]
A0A0L0H3Q5_SPIPD1.230e-2836.16DNA mismatch repair protein n=2 Tax=Spizellomyces ... [more]
A0A1A8DFW2_9TELE3.930e-2836.04MutS homolog 3 (Fragment) n=1 Tax=Nothobranchius k... [more]
A0A1A8CZT0_9TELE4.160e-2836.04DNA mismatch repair protein n=18 Tax=Nothobranchiu... [more]
A0A8C5FGK2_GADMO1.900e-2736.70MutS homolog 3 (E. coli) n=8 Tax=Gadus morhua TaxI... [more]
A0A669DVK0_ORENI3.540e-2733.63MutS homolog 3 (E. coli) n=1 Tax=Oreochromis nilot... [more]
UPI0006AAF00F4.810e-2734.07DNA mismatch repair protein Msh3 n=1 Tax=Pundamili... [more]
A0A3P8PKS1_ASTCA4.890e-2734.07DNA mismatch repair protein n=22 Tax=Cichlidae Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036678MutS, connector domain superfamilyGENE3D3.30.420.110coord: 1..74
e-value: 6.6E-8
score: 34.6
IPR007696DNA mismatch repair protein MutS, corePFAMPF05192MutS_IIIcoord: 82..207
e-value: 2.8E-25
score: 89.7
NoneNo IPR availableGENE3D1.10.1420.10coord: 76..221
e-value: 1.1E-33
score: 118.9
NoneNo IPR availablePANTHERPTHR11361:SF122DNA MISMATCH REPAIR PROTEIN MSH3coord: 3..221
NoneNo IPR availablePANTHERPTHR11361DNA MISMATCH REPAIR PROTEIN MUTS FAMILY MEMBERcoord: 3..221
IPR036187DNA mismatch repair protein MutS, core domain superfamilySUPERFAMILY48334DNA repair protein MutS, domain IIIcoord: 79..203

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig90109contigM-pyrifera_M_contig90109:5..667 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig90109.20884.1mRNA_M-pyrifera_M_contig90109.20884.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig90109 5..667 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig90109.20884.1 ID=prot_M-pyrifera_M_contig90109.20884.1|Name=mRNA_M-pyrifera_M_contig90109.20884.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=221bp
EAVRLERHSDFDHQRNMARVQRFFAEDAEARARLERIPAEVLVCVGVLVA
HLSQFGLEGILRLTDAFRSFAEAATLEMNATAVQQLELLESQDLGFLQAG
QAASSRRGSLLAVVDRTRTAFGGRLLRRWLLHPLCSVAAIGRRHAAVEEL
LTARDGPAILVARVRGALERLPDLERGVCRLYYNKCAPAEFFAVMKAFLR
LCTSLPTAAQARASGLSSPLL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036678MutS_con_dom_sf
IPR007696DNA_mismatch_repair_MutS_core
IPR036187DNA_mismatch_repair_MutS_sf