mRNA_M-pyrifera_M_contig90045.20867.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig90045.20867.1 vs. uniprot
Match: A0A518ABF5_9PLAN (Probable RNA 2'-phosphotransferase n=8 Tax=Gimesia TaxID=1649453 RepID=A0A518ABF5_9PLAN) HSP 1 Score: 150 bits (379), Expect = 1.050e-44 Identity = 71/76 (93.42%), Postives = 73/76 (96.05%), Query Frame = 1 Query: 1 QFVAVITREGLKKMKRHHVHLHGDENTALAVGQRRGKPVLLKIRSGEMSQAGFEFFVTPNQVWLTDRVPPEYIDFP 228 QFVA ITREGLKKMKRHHVHLHGDE+TA AVGQRRGKPVLL+IRSGEM QAGFEFFVTPNQVWLTDRVPPEYIDFP Sbjct: 106 QFVAAITREGLKKMKRHHVHLHGDESTAQAVGQRRGKPVLLQIRSGEMHQAGFEFFVTPNQVWLTDRVPPEYIDFP 181
BLAST of mRNA_M-pyrifera_M_contig90045.20867.1 vs. uniprot
Match: A0A517QC58_9PLAN (RNA 2'-phosphotransferase n=1 Tax=Gimesia panareensis TaxID=2527978 RepID=A0A517QC58_9PLAN) HSP 1 Score: 126 bits (316), Expect = 1.220e-36 Identity = 58/63 (92.06%), Postives = 61/63 (96.83%), Query Frame = 1 Query: 40 MKRHHVHLHGDENTALAVGQRRGKPVLLKIRSGEMSQAGFEFFVTPNQVWLTDRVPPEYIDFP 228 MKRHHVHLHGDE+TA AVGQRRGKPVLL+IRSGEM QAGFEFFVTPNQVWLTDRVPPEYI+FP Sbjct: 1 MKRHHVHLHGDESTAQAVGQRRGKPVLLQIRSGEMHQAGFEFFVTPNQVWLTDRVPPEYIEFP 63
BLAST of mRNA_M-pyrifera_M_contig90045.20867.1 vs. uniprot
Match: A6C4R9_9PLAN (Probable RNA 2'-phosphotransferase n=8 Tax=Planctomycetaceae TaxID=126 RepID=A6C4R9_9PLAN) HSP 1 Score: 121 bits (303), Expect = 3.540e-33 Identity = 55/76 (72.37%), Postives = 66/76 (86.84%), Query Frame = 1 Query: 1 QFVAVITREGLKKMKRHHVHLHGDENTALAVGQRRGKPVLLKIRSGEMSQAGFEFFVTPNQVWLTDRVPPEYIDFP 228 +F+ I+REGLKKM RHHVHLH DE T++AVG+RRG+PVLL++R+ EM QAG EFFVTPNQVWLT+ VP EYIDFP Sbjct: 106 KFIEPISREGLKKMNRHHVHLHVDEQTSIAVGRRRGRPVLLQVRAREMHQAGCEFFVTPNQVWLTESVPVEYIDFP 181
BLAST of mRNA_M-pyrifera_M_contig90045.20867.1 vs. uniprot
Match: A0A518IHP8_9PLAN (Probable RNA 2'-phosphotransferase n=2 Tax=Gimesia TaxID=1649453 RepID=A0A518IHP8_9PLAN) HSP 1 Score: 117 bits (294), Expect = 8.150e-32 Identity = 56/76 (73.68%), Postives = 62/76 (81.58%), Query Frame = 1 Query: 1 QFVAVITREGLKKMKRHHVHLHGDENTALAVGQRRGKPVLLKIRSGEMSQAGFEFFVTPNQVWLTDRVPPEYIDFP 228 QFV I REGLKKM+RHHVHLH DE T+L VG+RRG PVLL +RS EM +AG EFFVTPNQVWLT+ VP YIDFP Sbjct: 106 QFVDSIAREGLKKMQRHHVHLHVDEQTSLTVGRRRGTPVLLSVRSLEMHEAGCEFFVTPNQVWLTESVPAAYIDFP 181
BLAST of mRNA_M-pyrifera_M_contig90045.20867.1 vs. uniprot
Match: A0A517VU13_9PLAN (Probable RNA 2'-phosphotransferase n=1 Tax=Gimesia aquarii TaxID=2527964 RepID=A0A517VU13_9PLAN) HSP 1 Score: 116 bits (291), Expect = 2.380e-31 Identity = 55/76 (72.37%), Postives = 60/76 (78.95%), Query Frame = 1 Query: 1 QFVAVITREGLKKMKRHHVHLHGDENTALAVGQRRGKPVLLKIRSGEMSQAGFEFFVTPNQVWLTDRVPPEYIDFP 228 QFV I GL KMKRHHVHLH DE T+L VG RRG PVLLK+R+ EM QAGFEFFVTPN+VWLTD VP YI+FP Sbjct: 106 QFVGAIAHGGLMKMKRHHVHLHVDEKTSLNVGSRRGNPVLLKVRALEMHQAGFEFFVTPNEVWLTDHVPVVYIEFP 181
BLAST of mRNA_M-pyrifera_M_contig90045.20867.1 vs. uniprot
Match: A0A7Y2FA53_9BACT (Probable RNA 2'-phosphotransferase n=1 Tax=Pirellulaceae bacterium TaxID=2699754 RepID=A0A7Y2FA53_9BACT) HSP 1 Score: 112 bits (280), Expect = 1.100e-29 Identity = 52/76 (68.42%), Postives = 61/76 (80.26%), Query Frame = 1 Query: 1 QFVAVITREGLKKMKRHHVHLHGDENTALAVGQRRGKPVLLKIRSGEMSQAGFEFFVTPNQVWLTDRVPPEYIDFP 228 +FVA I ++GL+KM+RHHVHLH D A AVG RRGK VLL+IRSGEM +AG F+VTPNQVWL D VP E+IDFP Sbjct: 106 RFVAAIAKQGLEKMQRHHVHLHADSAVANAVGARRGKAVLLRIRSGEMHRAGHRFWVTPNQVWLVDHVPAEFIDFP 181
BLAST of mRNA_M-pyrifera_M_contig90045.20867.1 vs. uniprot
Match: A4A1P5_9BACT (Probable RNA 2'-phosphotransferase n=2 Tax=Blastopirellula marina TaxID=124 RepID=A4A1P5_9BACT) HSP 1 Score: 110 bits (275), Expect = 6.780e-29 Identity = 51/73 (69.86%), Postives = 57/73 (78.08%), Query Frame = 1 Query: 1 QFVAVITREGLKKMKRHHVHLHGDENTALAVGQRRGKPVLLKIRSGEMSQAGFEFFVTPNQVWLTDRVPPEYI 219 Q VA+I GLKKMKRHHVHLH D TA AVGQRRGKPVLL+I +G M G+ F+VTPNQVWLTD VPP Y+ Sbjct: 109 QSVAIILETGLKKMKRHHVHLHHDRQTASAVGQRRGKPVLLQIAAGRMHADGYSFYVTPNQVWLTDEVPPAYL 181
BLAST of mRNA_M-pyrifera_M_contig90045.20867.1 vs. uniprot
Match: A0A2S8GN84_9BACT (Probable RNA 2'-phosphotransferase n=1 Tax=Blastopirellula marina TaxID=124 RepID=A0A2S8GN84_9BACT) HSP 1 Score: 109 bits (272), Expect = 1.780e-28 Identity = 50/71 (70.42%), Postives = 57/71 (80.28%), Query Frame = 1 Query: 7 VAVITREGLKKMKRHHVHLHGDENTALAVGQRRGKPVLLKIRSGEMSQAGFEFFVTPNQVWLTDRVPPEYI 219 VA+I GLKKM RHHVHLH D+ TA AVGQRRGKPVLL+I SG M G+ F+VTPNQVWLTD VPP+Y+ Sbjct: 108 VAIIMETGLKKMARHHVHLHHDQETASAVGQRRGKPVLLQIASGRMHADGYLFYVTPNQVWLTDEVPPQYV 178
BLAST of mRNA_M-pyrifera_M_contig90045.20867.1 vs. uniprot
Match: UPI001E5C216E (RNA 2'-phosphotransferase n=1 Tax=unclassified Blastopirellula TaxID=2647022 RepID=UPI001E5C216E) HSP 1 Score: 107 bits (266), Expect = 1.430e-27 Identity = 50/71 (70.42%), Postives = 55/71 (77.46%), Query Frame = 1 Query: 7 VAVITREGLKKMKRHHVHLHGDENTALAVGQRRGKPVLLKIRSGEMSQAGFEFFVTPNQVWLTDRVPPEYI 219 VA+I GLKKM RHHVHLH D TA AVGQRRGKPVLL++ SG M G+ F+VTPNQVWLTD VPP YI Sbjct: 108 VAIILETGLKKMARHHVHLHHDRETASAVGQRRGKPVLLQVASGRMHGDGYLFYVTPNQVWLTDEVPPAYI 178
BLAST of mRNA_M-pyrifera_M_contig90045.20867.1 vs. uniprot
Match: A0A5C5UX26_9BACT (Probable RNA 2'-phosphotransferase n=1 Tax=Blastopirellula retiformator TaxID=2527970 RepID=A0A5C5UX26_9BACT) HSP 1 Score: 105 bits (262), Expect = 6.380e-27 Identity = 47/71 (66.20%), Postives = 57/71 (80.28%), Query Frame = 1 Query: 7 VAVITREGLKKMKRHHVHLHGDENTALAVGQRRGKPVLLKIRSGEMSQAGFEFFVTPNQVWLTDRVPPEYI 219 VA+I GLKKM RHHVHLH D+ TA AVGQRRGKP+LL+I +G M G+ F+VTPN+VWLTD VPP+Y+ Sbjct: 108 VAIILETGLKKMARHHVHLHHDQATASAVGQRRGKPILLQIAAGRMHADGYLFYVTPNEVWLTDEVPPQYL 178 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig90045.20867.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig90045.20867.1 >prot_M-pyrifera_M_contig90045.20867.1 ID=prot_M-pyrifera_M_contig90045.20867.1|Name=mRNA_M-pyrifera_M_contig90045.20867.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=77bp QFVAVITREGLKKMKRHHVHLHGDENTALAVGQRRGKPVLLKIRSGEMSQback to top mRNA from alignment at M-pyrifera_M_contig90045:2..232+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig90045.20867.1 ID=mRNA_M-pyrifera_M_contig90045.20867.1|Name=mRNA_M-pyrifera_M_contig90045.20867.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=231bp|location=Sequence derived from alignment at M-pyrifera_M_contig90045:2..232+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig90045:2..232+ >mRNA_M-pyrifera_M_contig90045.20867.1 ID=mRNA_M-pyrifera_M_contig90045.20867.1|Name=mRNA_M-pyrifera_M_contig90045.20867.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=462bp|location=Sequence derived from alignment at M-pyrifera_M_contig90045:2..232+ (Macrocystis pyrifera P11B4 male)back to top |