prot_M-pyrifera_M_contig89550.20762.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_M-pyrifera_M_contig89550.20762.1
Unique Name	prot_M-pyrifera_M_contig89550.20762.1
Type	polypeptide
Organism	Macrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length	109

Homology

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BLAST of mRNA_M-pyrifera_M_contig89550.20762.1 vs. uniprot
Match: A0A518AQU1_9BACT (Uncharacterized protein n=1 Tax=Aeoliella mucimassa TaxID=2527972 RepID=A0A518AQU1_9BACT)

HSP 1 Score: 58.5 bits (140), Expect = 9.660e-8
Identity = 35/105 (33.33%), Postives = 57/105 (54.29%), Query Frame = 0

Query:   10 CPTCGKPGLGKKEEWCTGCGFYPRLGIQIEVDPDPE-----DHPPAPE---TAMDIVKQTPTWAFVLFGGLLVLLGISIAVRLTIPVSNIARPLWAIGQFLLGMM 106
            C  C  P + +++  C  CG++  LGI +E+D + E     D  PAP+   T  +I +  P+WA  L    +V++ +S+AVRL IP  +I    W + Q  +G+M
Sbjct:   29 CKRCESP-MDEEQPVCFECGYHTTLGITVEIDREWEAAANPDSAPAPQQQDTWQEITQSIPSWAATLAVPNVVIIAMSLAVRLLIPRESIILEFWGVWQLAIGLM 132

The following BLAST results are available for this feature:

BLAST of mRNA_M-pyrifera_M_contig89550.20762.1 vs. uniprot

BLAST of mRNA_M-pyrifera_M_contig89550.20762.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A518AQU1_9BACT	9.660e-8	33.33	Uncharacterized protein n=1 Tax=Aeoliella mucimass...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 64..85
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 1..63
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 86..90
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 109..109
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 91..108
None	No IPR available	TMHMM	TMhelix		coord: 64..86

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
M-pyrifera_M_contig89550	contig	M-pyrifera_M_contig89550:477..803 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male	2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90	2022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_M-pyrifera_M_contig89550.20762.1	mRNA_M-pyrifera_M_contig89550.20762.1	Macrocystis pyrifera P11B4 male	mRNA	M-pyrifera_M_contig89550 477..803 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_M-pyrifera_M_contig89550.20762.1 ID=prot_M-pyrifera_M_contig89550.20762.1|Name=mRNA_M-pyrifera_M_contig89550.20762.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=109bp
SVEEIAEDACPTCGKPGLGKKEEWCTGCGFYPRLGIQIEVDPDPEDHPPA
PETAMDIVKQTPTWAFVLFGGLLVLLGISIAVRLTIPVSNIARPLWAIGQ
FLLGMMVFF