prot_M-pyrifera_M_contig89537.20758.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_M-pyrifera_M_contig89537.20758.1
Unique Name	prot_M-pyrifera_M_contig89537.20758.1
Type	polypeptide
Organism	Macrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length	113

Homology

[Close]

BLAST of mRNA_M-pyrifera_M_contig89537.20758.1 vs. uniprot
Match: UPI001298C0DC (40S ribosomal protein S3a/S1 n=3 Tax=Bacillus thuringiensis TaxID=1428 RepID=UPI001298C0DC)

HSP 1 Score: 138 bits (347), Expect = 7.850e-39
Identity = 71/111 (63.96%), Postives = 87/111 (78.38%), Query Frame = 0

Query:    1 GYVLRLFCLGFTKKRQNQVKKTCYAQASQVRQIRKKMLDIMKREAEC-DLRGLVEKLKTNTIGETIAKDCQGIYPLNNVNVRKVKMLKTPKYDPSKLLELHGEAGSSGKKV 110
            GY+LRLFC+GFT KRQNQ+KKT YAQ+ QVR IR+KM+DIM RE    DL+ LV KL  ++IG+ I K CQGIYPL +V++RKVK+LK PK+D  KL+ELHGE  SSG K 
Sbjct:   76 GYLLRLFCIGFTNKRQNQIKKTFYAQSEQVRNIRRKMVDIMAREVSSNDLKELVNKLIPDSIGKDIEKACQGIYPLRDVHIRKVKILKKPKFDLGKLMELHGEGSSSGGKT 186

[Close]

BLAST of mRNA_M-pyrifera_M_contig89537.20758.1 vs. uniprot
Match: A0A2K5CMM9_AOTNA (Ribosomal protein S3A n=1 Tax=Aotus nancymaae TaxID=37293 RepID=A0A2K5CMM9_AOTNA)

HSP 1 Score: 135 bits (339), Expect = 2.190e-38
Identity = 70/109 (64.22%), Postives = 87/109 (79.82%), Query Frame = 0

Query:    1 GYVLRLFCLGFTKKRQNQVKKTCYAQASQVRQIRKKMLDIMKREAEC-DLRGLVEKLKTNTIGETIAKDCQGIYPLNNVNVRKVKMLKTPKYDPSKLLELHGEAGSSGK 108
            GY+LRLFC+GFTKKR NQ++KT YAQ  QVRQIRKKM++IM RE +  DL+ +V KL  ++IG+ I K CQ IYPL++V VRKVKMLK PK++  KL+ELHGE  SSGK
Sbjct:   13 GYLLRLFCVGFTKKRNNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKACQSIYPLHDVFVRKVKMLKKPKFELGKLMELHGEGSSSGK 121

[Close]

BLAST of mRNA_M-pyrifera_M_contig89537.20758.1 vs. uniprot
Match: A0A7N5JYC9_AILME (40S ribosomal protein S3a n=2 Tax=Ailuropoda melanoleuca TaxID=9646 RepID=A0A7N5JYC9_AILME)

HSP 1 Score: 134 bits (338), Expect = 2.600e-38
Identity = 69/109 (63.30%), Postives = 87/109 (79.82%), Query Frame = 0

Query:    1 GYVLRLFCLGFTKKRQNQVKKTCYAQASQVRQIRKKMLDIMKREAEC-DLRGLVEKLKTNTIGETIAKDCQGIYPLNNVNVRKVKMLKTPKYDPSKLLELHGEAGSSGK 108
            GY+LRLFC+GFTKKR NQ++KT YAQ  QVRQIRKKM++IM RE +  DL+ +V KL  ++IG+ I K CQ IYPL++V VRKVKMLK PK++  KL+ELHGE G +GK
Sbjct:   13 GYLLRLFCVGFTKKRTNQIRKTSYAQHQQVRQIRKKMVEIMTREVQTNDLKEIVNKLIPDSIGKDIEKACQSIYPLHDVYVRKVKMLKKPKFELGKLMELHGEGGGAGK 121

[Close]

BLAST of mRNA_M-pyrifera_M_contig89537.20758.1 vs. uniprot
Match: A0A8J6F7A8_ELECQ (40S ribosomal protein S3a n=3 Tax=Neobatrachia TaxID=8416 RepID=A0A8J6F7A8_ELECQ)

HSP 1 Score: 137 bits (346), Expect = 4.410e-38
Identity = 71/109 (65.14%), Postives = 88/109 (80.73%), Query Frame = 0

Query:    1 GYVLRLFCLGFTKKRQNQVKKTCYAQASQVRQIRKKMLDIMKREAEC-DLRGLVEKLKTNTIGETIAKDCQGIYPLNNVNVRKVKMLKTPKYDPSKLLELHGEAGSSGK 108
            GY+LRLFC+GFTKKR NQ++KT YAQ  QVRQIRKKM++IM RE +  DL+ +V KL  ++IG+ I K CQ IYPL++V VRKVKMLK PK++  KL+ELHGE GSSGK
Sbjct:  132 GYLLRLFCVGFTKKRNNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKACQSIYPLHDVYVRKVKMLKKPKFELGKLMELHGEGGSSGK 240

[Close]

BLAST of mRNA_M-pyrifera_M_contig89537.20758.1 vs. uniprot
Match: K7P590_9PIPI (Ribosomal protein S3A (Fragment) n=4 Tax=Tetrapoda TaxID=32523 RepID=K7P590_9PIPI)

HSP 1 Score: 135 bits (339), Expect = 5.450e-38
Identity = 69/109 (63.30%), Postives = 87/109 (79.82%), Query Frame = 0

Query:    1 GYVLRLFCLGFTKKRQNQVKKTCYAQASQVRQIRKKMLDIMKREAEC-DLRGLVEKLKTNTIGETIAKDCQGIYPLNNVNVRKVKMLKTPKYDPSKLLELHGEAGSSGK 108
            GY+LRLFC+GFTKKR NQ++KT YAQ  QVRQIRKKM++IM RE +  DL+ +V KL  ++IG+ I K CQ IYPL++V VRKVKMLK PK++  KL+ELHGE G +GK
Sbjct:   51 GYLLRLFCVGFTKKRNNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKACQSIYPLHDVYVRKVKMLKKPKFELGKLMELHGEGGGAGK 159

[Close]

BLAST of mRNA_M-pyrifera_M_contig89537.20758.1 vs. uniprot
Match: RS3A_RAT (40S ribosomal protein S3a n=56 Tax=cellular organisms TaxID=131567 RepID=RS3A_RAT)

HSP 1 Score: 137 bits (345), Expect = 6.230e-38
Identity = 71/109 (65.14%), Postives = 88/109 (80.73%), Query Frame = 0

Query:    1 GYVLRLFCLGFTKKRQNQVKKTCYAQASQVRQIRKKMLDIMKREAEC-DLRGLVEKLKTNTIGETIAKDCQGIYPLNNVNVRKVKMLKTPKYDPSKLLELHGEAGSSGK 108
            GY+LRLFC+GFTKKR NQ++KT YAQ  QVRQIRKKM++IM RE +  DL+ +V KL  ++IG+ I K CQ IYPL++V VRKVKMLK PK++  KL+ELHGE GSSGK
Sbjct:  132 GYLLRLFCVGFTKKRNNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKACQSIYPLHDVFVRKVKMLKKPKFELGKLMELHGEGGSSGK 240

[Close]

BLAST of mRNA_M-pyrifera_M_contig89537.20758.1 vs. uniprot
Match: A0A8C5LLJ4_9ANUR (40S ribosomal protein S3a n=1 Tax=Leptobrachium leishanense TaxID=445787 RepID=A0A8C5LLJ4_9ANUR)

HSP 1 Score: 136 bits (343), Expect = 7.270e-38
Identity = 70/109 (64.22%), Postives = 88/109 (80.73%), Query Frame = 0

Query:    1 GYVLRLFCLGFTKKRQNQVKKTCYAQASQVRQIRKKMLDIMKREAEC-DLRGLVEKLKTNTIGETIAKDCQGIYPLNNVNVRKVKMLKTPKYDPSKLLELHGEAGSSGK 108
            GY+LRLFC+GFTKKR NQ++KT YAQ  QVRQIRKKM++IM RE +  DL+ +V KL  ++IG+ I K CQ IYPL++V VRKVKMLK PK++  KL+ELHGE GS+GK
Sbjct:  111 GYLLRLFCVGFTKKRSNQIRKTSYAQHQQVRQIRKKMMEIMTREVQINDLKEVVNKLIPDSIGKDIEKACQSIYPLHDVYVRKVKMLKKPKFELGKLMELHGEGGSAGK 219

[Close]

BLAST of mRNA_M-pyrifera_M_contig89537.20758.1 vs. uniprot
Match: A0A2K6S2S3_SAIBB (Uncharacterized protein n=2 Tax=Boreoeutheria TaxID=1437010 RepID=A0A2K6S2S3_SAIBB)

HSP 1 Score: 133 bits (335), Expect = 8.130e-38
Identity = 69/109 (63.30%), Postives = 87/109 (79.82%), Query Frame = 0

Query:    1 GYVLRLFCLGFTKKRQNQVKKTCYAQASQVRQIRKKMLDIMKREAEC-DLRGLVEKLKTNTIGETIAKDCQGIYPLNNVNVRKVKMLKTPKYDPSKLLELHGEAGSSGK 108
            GY+LRLFC+GFTKKR NQ++KT YAQ  QVRQIRKKM++IM +E +  DL+ +V KL  ++IG+ I K CQ IYPL++V VRKVKMLK PK++  KL+ELHGE  SSGK
Sbjct:   16 GYLLRLFCVGFTKKRNNQIRKTSYAQHQQVRQIRKKMMEIMTQEVQTNDLKEVVNKLIPDSIGKDIEKACQSIYPLHDVFVRKVKMLKKPKFELGKLMELHGEGSSSGK 124

[Close]

BLAST of mRNA_M-pyrifera_M_contig89537.20758.1 vs. uniprot
Match: UPI0005F41D82 (40S ribosomal protein S3a-like n=1 Tax=Mandrillus leucophaeus TaxID=9568 RepID=UPI0005F41D82)

HSP 1 Score: 135 bits (339), Expect = 9.100e-38
Identity = 70/109 (64.22%), Postives = 87/109 (79.82%), Query Frame = 0

Query:    1 GYVLRLFCLGFTKKRQNQVKKTCYAQASQVRQIRKKMLDIMKREAEC-DLRGLVEKLKTNTIGETIAKDCQGIYPLNNVNVRKVKMLKTPKYDPSKLLELHGEAGSSGK 108
            GY+LRLFC+GFTKKR NQ++KT YAQ  QVRQIRKKM++IM RE +  DL+ +V KL  ++IG+ I K CQ IYPL++V VRKVKMLK PK++  KL+ELHGE  SSGK
Sbjct:   68 GYLLRLFCVGFTKKRNNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKACQSIYPLHDVFVRKVKMLKKPKFELGKLMELHGEGSSSGK 176

[Close]

BLAST of mRNA_M-pyrifera_M_contig89537.20758.1 vs. uniprot
Match: A0A7S0HQA3_9EUKA (40S ribosomal protein S3a n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0HQA3_9EUKA)

HSP 1 Score: 136 bits (343), Expect = 1.100e-37
Identity = 72/114 (63.16%), Postives = 89/114 (78.07%), Query Frame = 0

Query:    1 GYVLRLFCLGFTKKRQNQVKKTCYAQASQVRQIRKKMLDIMKREAE-CDLRGLVEKLKTNTIGETIAKDCQGIYPLNNVNVRKVKMLKTPKYDPSKLLELHGEAGS--SGKKVK 111
            GYVLRLFC+GFTKKR NQ+KKTCYA  +QV+ IRKKM DIM REA+ C L+ LV+KL   +IG+ + K C GIYPL NV VRKVKMLK PK+D +KLLE+H ++G   +G KV+
Sbjct:  132 GYVLRLFCIGFTKKRMNQLKKTCYANNAQVKAIRKKMTDIMTREAQSCPLKQLVDKLIPESIGKEVEKACSGIYPLQNVFVRKVKMLKKPKFDLTKLLEVHADSGKEDTGAKVE 245

The following BLAST results are available for this feature:

BLAST of mRNA_M-pyrifera_M_contig89537.20758.1 vs. uniprot

BLAST of mRNA_M-pyrifera_M_contig89537.20758.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
UPI001298C0DC	7.850e-39	63.96	40S ribosomal protein S3a/S1 n=3 Tax=Bacillus thur...	[more]
A0A2K5CMM9_AOTNA	2.190e-38	64.22	Ribosomal protein S3A n=1 Tax=Aotus nancymaae TaxI...	[more]
A0A7N5JYC9_AILME	2.600e-38	63.30	40S ribosomal protein S3a n=2 Tax=Ailuropoda melan...	[more]
A0A8J6F7A8_ELECQ	4.410e-38	65.14	40S ribosomal protein S3a n=3 Tax=Neobatrachia Tax...	[more]
K7P590_9PIPI	5.450e-38	63.30	Ribosomal protein S3A (Fragment) n=4 Tax=Tetrapoda...	[more]
RS3A_RAT	6.230e-38	65.14	40S ribosomal protein S3a n=56 Tax=cellular organi...	[more]
A0A8C5LLJ4_9ANUR	7.270e-38	64.22	40S ribosomal protein S3a n=1 Tax=Leptobrachium le...	[more]
A0A2K6S2S3_SAIBB	8.130e-38	63.30	Uncharacterized protein n=2 Tax=Boreoeutheria TaxI...	[more]
UPI0005F41D82	9.100e-38	64.22	40S ribosomal protein S3a-like n=1 Tax=Mandrillus ...	[more]
A0A7S0HQA3_9EUKA	1.100e-37	63.16	40S ribosomal protein S3a n=1 Tax=Phaeocystis anta...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001593	Ribosomal protein S3Ae	SMART	SM01397	Ribosomal_S3Ae_2	coord: 1..89 e-value: 1.9E-7 score: 13.7
IPR001593	Ribosomal protein S3Ae	PFAM	PF01015	Ribosomal_S3Ae	coord: 1..89 e-value: 6.8E-28 score: 97.6
None	No IPR available	PANTHER	PTHR11830:SF26	40S RIBOSOMAL PROTEIN S3A	coord: 1..109
None	No IPR available	PANTHER	PTHR11830	40S RIBOSOMAL PROTEIN S3A	coord: 1..109

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
M-pyrifera_M_contig89537	contig	M-pyrifera_M_contig89537:466..804 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male	2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90	2022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_M-pyrifera_M_contig89537.20758.1	mRNA_M-pyrifera_M_contig89537.20758.1	Macrocystis pyrifera P11B4 male	mRNA	M-pyrifera_M_contig89537 466..804 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_M-pyrifera_M_contig89537.20758.1 ID=prot_M-pyrifera_M_contig89537.20758.1|Name=mRNA_M-pyrifera_M_contig89537.20758.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=113bp
GYVLRLFCLGFTKKRQNQVKKTCYAQASQVRQIRKKMLDIMKREAECDLR
GLVEKLKTNTIGETIAKDCQGIYPLNNVNVRKVKMLKTPKYDPSKLLELH
GEAGSSGKKVKN*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001593	Ribosomal_S3Ae