mRNA_M-pyrifera_M_contig89506.20751.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig89506.20751.1 vs. uniprot
Match: A0A6H5JI21_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JI21_9PHAE) HSP 1 Score: 116 bits (290), Expect = 1.170e-29 Identity = 56/67 (83.58%), Postives = 59/67 (88.06%), Query Frame = 1 Query: 34 GCFQAYDAVPFFPDVDISIRVLGFWFVWLFTVPSLRARKPREAEKVALNIAFLATPVVSFAMPFVTK 234 G A D VPFFP VDISI+VLGFWFVWLFTVPSLRARKP +EKVAL+IAFLATPVVSFAMPFVTK Sbjct: 201 GGLMASDQVPFFPHVDISIQVLGFWFVWLFTVPSLRARKPGASEKVALDIAFLATPVVSFAMPFVTK 267
BLAST of mRNA_M-pyrifera_M_contig89506.20751.1 vs. uniprot
Match: D8LL49_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL49_ECTSI) HSP 1 Score: 115 bits (289), Expect = 1.890e-29 Identity = 55/67 (82.09%), Postives = 59/67 (88.06%), Query Frame = 1 Query: 34 GCFQAYDAVPFFPDVDISIRVLGFWFVWLFTVPSLRARKPREAEKVALNIAFLATPVVSFAMPFVTK 234 G A D VPFFP VDISI+VLGFWFVWLFTVPSLRARKP +EKVAL+IAFLATPVVSFAMPF+TK Sbjct: 197 GGLMASDQVPFFPHVDISIQVLGFWFVWLFTVPSLRARKPGASEKVALDIAFLATPVVSFAMPFITK 263
BLAST of mRNA_M-pyrifera_M_contig89506.20751.1 vs. uniprot
Match: A0A7S2FEW9_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FEW9_9STRA) HSP 1 Score: 96.7 bits (239), Expect = 1.720e-23 Identity = 45/69 (65.22%), Postives = 55/69 (79.71%), Query Frame = 1 Query: 46 AYDAVPFFPDVDISIRVLGFWFVWLFTVPSLRARKP------REAEKVALNIAFLATPVVSFAMPFVTK 234 AYDA+PFFP +D+S+RVLGFW +WLFT+PSLR+RKP AEK AL+I+FL TPVV+ AMP VTK Sbjct: 13 AYDAMPFFPHLDLSVRVLGFWGIWLFTIPSLRSRKPGGVWGMNGAEKKALDISFLLTPVVNLAMPIVTK 81
BLAST of mRNA_M-pyrifera_M_contig89506.20751.1 vs. uniprot
Match: A0A7S2UZ01_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UZ01_9STRA) HSP 1 Score: 96.7 bits (239), Expect = 1.810e-22 Identity = 43/64 (67.19%), Postives = 50/64 (78.12%), Query Frame = 1 Query: 43 QAYDAVPFFPDVDISIRVLGFWFVWLFTVPSLRARKPREAEKVALNIAFLATPVVSFAMPFVTK 234 YDAVPF +D+S+RVLGFW +WLFTVPSLRARKP EK ALNIAF ATP+ + A+PF TK Sbjct: 170 MVYDAVPFVDHLDLSVRVLGFWVIWLFTVPSLRARKPAADEKTALNIAFGATPLTNLALPFFTK 233
BLAST of mRNA_M-pyrifera_M_contig89506.20751.1 vs. uniprot
Match: A0A6S9FX91_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9FX91_HETAK) HSP 1 Score: 95.1 bits (235), Expect = 5.660e-22 Identity = 43/65 (66.15%), Postives = 49/65 (75.38%), Query Frame = 1 Query: 40 FQAYDAVPFFPDVDISIRVLGFWFVWLFTVPSLRARKPREAEKVALNIAFLATPVVSFAMPFVTK 234 F +Y VPF DVDIS+RVLGFWF+WLFT+PSLRARKP EK ALN AF TP+ + PFVTK Sbjct: 161 FLSYGIVPFVEDVDISVRVLGFWFIWLFTIPSLRARKPAAGEKEALNWAFGLTPLTNLLAPFVTK 225
BLAST of mRNA_M-pyrifera_M_contig89506.20751.1 vs. uniprot
Match: A0A835YV04_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YV04_9STRA) HSP 1 Score: 92.8 bits (229), Expect = 4.100e-21 Identity = 43/65 (66.15%), Postives = 51/65 (78.46%), Query Frame = 1 Query: 43 QAYDAVPFFPDVDISIRVLGFWFVWLFTVPSLRARKPRE-AEKVALNIAFLATPVVSFAMPFVTK 234 YD VP F VD+SIRVLGFW +WLF +PSLRARKP AEK ALNIAF+A+P+VS A+P +TK Sbjct: 160 MVYDRVPGFEHVDLSIRVLGFWVIWLFAIPSLRARKPTNPAEKTALNIAFVASPLVSLALPAITK 224
BLAST of mRNA_M-pyrifera_M_contig89506.20751.1 vs. uniprot
Match: A0A7S2FLN3_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2FLN3_9STRA) HSP 1 Score: 88.2 bits (217), Expect = 4.090e-19 Identity = 39/69 (56.52%), Postives = 52/69 (75.36%), Query Frame = 1 Query: 46 AYDAVPFFPDVDISIRVLGFWFVWLFTVPSLRARKP------REAEKVALNIAFLATPVVSFAMPFVTK 234 +YDA+PF P++D+++RVLGFW +WLFT+PSLR+RKP AEK AL+IAFL TP+ + PF TK Sbjct: 167 SYDALPFLPNLDLAVRVLGFWGIWLFTIPSLRSRKPGGVWGMSNAEKNALDIAFLVTPLANLLAPFATK 235
BLAST of mRNA_M-pyrifera_M_contig89506.20751.1 vs. uniprot
Match: A0A7S3ERS1_9EUKA (Hypothetical protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3ERS1_9EUKA) HSP 1 Score: 85.5 bits (210), Expect = 4.500e-19 Identity = 40/67 (59.70%), Postives = 50/67 (74.63%), Query Frame = 1 Query: 34 GCFQAYDAVPFFPDVDISIRVLGFWFVWLFTVPSLRARKPREAEKVALNIAFLATPVVSFAMPFVTK 234 G A+DA P +DIS+R LGFW WLFT+PSLRAR+P+ EK ALNIAFL +P+++FA PF TK Sbjct: 40 GGVAAFDAFPTV-TIDISLRALGFWSYWLFTIPSLRARRPKGWEKKALNIAFLGSPLLTFAAPFATK 105
BLAST of mRNA_M-pyrifera_M_contig89506.20751.1 vs. uniprot
Match: M2VTY8_GALSU (Uncharacterized protein n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2VTY8_GALSU) HSP 1 Score: 84.7 bits (208), Expect = 1.670e-18 Identity = 40/68 (58.82%), Postives = 47/68 (69.12%), Query Frame = 1 Query: 31 GGCFQAYDAVPFFPDVDISIRVLGFWFVWLFTVPSLRARKPREAEKVALNIAFLATPVVSFAMPFVTK 234 GG A + PF +V + R LGFW VWLFT+PSLRARKP AEK ALN+AFLA PV + +PFV K Sbjct: 102 GGLLAA-NKFPFVQEVPLVFRALGFWMVWLFTIPSLRARKPNMAEKNALNVAFLACPVANVVIPFVNK 168
BLAST of mRNA_M-pyrifera_M_contig89506.20751.1 vs. uniprot
Match: A0A7S2TND9_9EUKA (Hypothetical protein n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2TND9_9EUKA) HSP 1 Score: 85.5 bits (210), Expect = 4.110e-18 Identity = 36/58 (62.07%), Postives = 47/58 (81.03%), Query Frame = 1 Query: 61 PFFPDVDISIRVLGFWFVWLFTVPSLRARKPREAEKVALNIAFLATPVVSFAMPFVTK 234 P +PD+ I+ + LGFW +WLFT+PSLRARKP E EK ALN+AFLATP+++ A+P V K Sbjct: 187 PGYPDLPIAAQALGFWTIWLFTIPSLRARKPAEVEKQALNVAFLATPLLNLAIPSVAK 244 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig89506.20751.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig89506.20751.1 >prot_M-pyrifera_M_contig89506.20751.1 ID=prot_M-pyrifera_M_contig89506.20751.1|Name=mRNA_M-pyrifera_M_contig89506.20751.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=78bp ATSPFYLYAGGGCFQAYDAVPFFPDVDISIRVLGFWFVWLFTVPSLRARKback to top mRNA from alignment at M-pyrifera_M_contig89506:506..739- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig89506.20751.1 ID=mRNA_M-pyrifera_M_contig89506.20751.1|Name=mRNA_M-pyrifera_M_contig89506.20751.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=234bp|location=Sequence derived from alignment at M-pyrifera_M_contig89506:506..739- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig89506:506..739- >mRNA_M-pyrifera_M_contig89506.20751.1 ID=mRNA_M-pyrifera_M_contig89506.20751.1|Name=mRNA_M-pyrifera_M_contig89506.20751.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=468bp|location=Sequence derived from alignment at M-pyrifera_M_contig89506:506..739- (Macrocystis pyrifera P11B4 male)back to top |