mRNA_M-pyrifera_M_contig89332.20708.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig89332.20708.1 vs. uniprot
Match: A0A5A8CR06_CAFRO (Uncharacterized protein n=3 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8CR06_CAFRO) HSP 1 Score: 124 bits (310), Expect = 3.910e-29 Identity = 72/198 (36.36%), Postives = 113/198 (57.07%), Query Frame = 1 Query: 4 REQVVQSFLVIAFLLHTPISKAAFRIMTCRPVGPTDSSGLDDPRTQLRLSMDMNYICTGN-TLGRMVGMGLPVVLCFSFGLPIAAWIFLRQQGGSRRVGDPLLRSRLGFYYNGYSPAYFYWESIVLLRKVTLAMVTVLLGPYGGGIQALTALLLILFSLVLQSWAKPYEEGSLNKLELFALVVAAVTLVGGLYVVFDN 594 R++++ S V+ F++HT ++KAA + TCR + D +G ++ L+ DM C T+G + GLP L FS G+PIAA++ LR++ ++ P +R GF Y G+ ++WES+V+ RKV L+++ V L PYG +QA AL ++ + +L PYEE S N LEL +LV +T+ GL N Sbjct: 3152 RDRLIVSVFVVLFMIHTTVTKAALSLFTCRWI--RDETGREEATEWQVLTADMTVGCNDPATVGWKLAAGLPTFLLFSCGVPIAAYLALRRE--RHKLERPRVRQTYGFLYAGFRSHVYFWESVVMARKVLLSVIVVFLEPYGVDVQAYVALAVLFAAALLHVATWPYEETSANSLELLSLVACFLTITLGLMTFSPN 3345
BLAST of mRNA_M-pyrifera_M_contig89332.20708.1 vs. uniprot
Match: A0A067C6E6_SAPPC (Uncharacterized protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067C6E6_SAPPC) HSP 1 Score: 107 bits (266), Expect = 2.810e-23 Identity = 67/192 (34.90%), Postives = 109/192 (56.77%), Query Frame = 1 Query: 7 EQVVQSFLVIAFLLHTPISKAAFRIMTCRPVGPTDSSGLDDPRTQLRLSMDMNYIC-TGNTLGRMVGMGLPVVLCFSFGLPIAAWIFLRQQGGSRRVGDPLLRSRLGFYYNGYSPAYFYWESIVLLRKVTLAMVTVLLGPYGGGIQALTALLLILFSLVLQSWAKPYEEGSLNKLELFALVVAAVTLVGGLY 579 ++ V S +V+ FL+H ++K F++ +C +G D G+ L D++ C + M+G+GLP VLC +FG+P A+ LR + + + DP + + GF Y+GY A++YWE +++RKV ++MV+V L +G G Q+L A LI +L + A PYE +N LE +L+ T+ GLY Sbjct: 981 DKSVLSIIVLMFLIHPGVTKQIFQLFSCSELG-MDEHGV----AMAFLDADLDIPCYDASHFKWMLGVGLPSVLCITFGIPGFAYGVLRARRAT--LDDPRTQLQFGFLYDGYKLAHYYWEIWIMMRKVLVSMVSVFLKSWGTGPQSLGATGLIFVALYIHMEATPYELDVVNNLEQTSLLTCLFTMYFGLY 1165
BLAST of mRNA_M-pyrifera_M_contig89332.20708.1 vs. uniprot
Match: J9I2F5_9SPIT (Uncharacterized protein n=1 Tax=Oxytricha trifallax TaxID=1172189 RepID=J9I2F5_9SPIT) HSP 1 Score: 97.8 bits (242), Expect = 4.850e-20 Identity = 64/207 (30.92%), Postives = 112/207 (54.11%), Query Frame = 1 Query: 4 REQVVQSFLVIAFLLHTPISKAAFRIMTCRPVGPTDSSGLDDPRTQLRLSMDMNYICTGNTLGRMVGMGLPVVLCFSFGLPIAAWIFL-RQQGGSRRVG--DPL----------LRSRLGFYYNGYSPAYFYWESIVLLRKVTLAMVTVLLGPYGGGIQALTALLLILFSLVLQSWAKPYEEGSLNKLELFALVVAAVTLVGGLYVV 585 R++++ + +++ FL+H I+K F+ C V D +L+ ++DM + + V + +P ++ + G+P+A+ + L R + RVG D L L+ + GF++NGY F+WE I+L RK+++ MV+V Q L +L+I+ SL+LQ KP+ LNK+ELF+L VA +T+ GG++ V Sbjct: 2346 RDKLISTMVILLFLVHPTIAKILFQAFNCIEV---------DGINRLKSNIDMVCYKDQHMIYLFVVV-IPGIIIWVIGIPLASLVMLLRNREKIMRVGKYDELSQSDKYQIIHLKMKYGFFFNGYKLGTFFWEVIILYRKISIVMVSVFFSVVSAEAQVLVVILIIVVSLLLQIKYKPFYTDELNKMELFSLQVAVITMYGGMFYV 2542
BLAST of mRNA_M-pyrifera_M_contig89332.20708.1 vs. uniprot
Match: A0A835T2T5_9CHLO (EF-hand domain-containing protein n=1 Tax=Chlamydomonas schloesseri TaxID=2026947 RepID=A0A835T2T5_9CHLO) HSP 1 Score: 97.4 bits (241), Expect = 6.660e-20 Identity = 49/132 (37.12%), Postives = 80/132 (60.61%), Query Frame = 1 Query: 199 VGMGLPVVLCFSFGLPIAAWIFLRQQGGSRRVGDPLLRSRLGFYYNGYSPAYFYWESIVLLRKVTLAMVTVLLGPYGGGIQALTALLLILFSLVLQSWAKPYEEGSLNKLELFALVVAAVTLVGGLYVVFDN 594 +G+ LP+V+ FS G+P+A+ +FLR SR DP ++ GF Y Y P YFYWESI++ RK+ + +V V +G G G+Q L A+ +++ + V+Q P+ E ++N LE +L + TL L++ + Sbjct: 3873 MGLALPLVVVFSLGVPVASGVFLRYNR-SRLENDPAFAAKYGFVYGEYRPRYFYWESIIMFRKLIMVVVIVYVGYVGVGVQVLVAMGVLMLATVVQLLCSPFREPAMNDLERLSLYSTSATLYLSLFLYVEG 4003
BLAST of mRNA_M-pyrifera_M_contig89332.20708.1 vs. uniprot
Match: A0A8J4BME7_9CHLO (TRP domain-containing protein n=3 Tax=Volvox africanus TaxID=51714 RepID=A0A8J4BME7_9CHLO) HSP 1 Score: 94.4 bits (233), Expect = 7.570e-19 Identity = 64/203 (31.53%), Postives = 104/203 (51.23%), Query Frame = 1 Query: 4 REQVVQSFLVIAFLLHTPISKAAFRIMTCRPVGPTDSSGLDDPRTQLR------LSMDMNYICTGNT-LGRMVGMGLPVVLCFSFGLPIAAWIFLRQQGGSRRVGDPLLRSRLGFYYNGYSPAYFYWESIVLLRKVTLAMVTVLLGPYGGGIQALTALLLILFSLVLQSWAKPYEEGSLNKLELFALVVAAVTLVGGLYVVFD 591 R +++ + + I F ++ ++ A + +C+ V P L P QL S D++ C L + +GLP V+ FS G P+ +W +LRQ + R GF Y YS ++YW+SIV+LRK+ + +V V LG +Q LTAL +I+ +++ Q A+PY+ +N LE +L+ V L L+ V D Sbjct: 1758 RPRLIITTIAIVFYVYPDVTNAFLSLFSCQLVDP-----LTGPYVQLMEARGYFWSSDLDLECYRQPHLWLALAVGLPGVVLFSAGCPVFSWFWLRQHYDVLFKSEEF-RVSYGFMYEDYSRMHYYWDSIVMLRKLAIVVVIVFLGSASPSLQVLTALGIIMSAMIAQISARPYKHQRMNDLERLSLLATMVMLYCALFFVSD 1954
BLAST of mRNA_M-pyrifera_M_contig89332.20708.1 vs. uniprot
Match: A0A835T3F6_CHLIN (TRP domain-containing protein n=1 Tax=Chlamydomonas incerta TaxID=51695 RepID=A0A835T3F6_CHLIN) HSP 1 Score: 92.4 bits (228), Expect = 3.600e-18 Identity = 59/198 (29.80%), Postives = 98/198 (49.49%), Query Frame = 1 Query: 10 QVVQSFLVIAFLLHTPISKAAFRIMTCRPVGPTDSS---GLDDPRTQLRLSMDMNYICTGNT-LGRMVGMGLPVVLCFSFGLPIAAWIFLRQQGGSRRVGDPLLRSRLGFYYNGYSPAYFYWESIVLLRKVTLAMVTVLLGPYGGGIQALTALLLILFSLVLQSWAKPYEEGSLNKLELFALVVAAVTLVGGLYVVFD 591 +++ + + I F ++ I+ A + +C V P + G + L + D+N C N L +G+GLP ++ S G P+ +W++LR+ + P GF Y Y+ +YW+SI++ RK+ + M V L PY +Q LT L +I+ SLV Q PY+ +N+LE +L L LY + D Sbjct: 3125 RIIITIIAIVFYVYPDITGAFMELFSCTTVDPEGADVAYGALMEQRGLYWTSDLNLACYQNPHLWLSLGVGLPGLVLISIGAPVFSWVWLRRHQ-HKLYTSPSFGVSYGFMYEDYNRNCYYWDSIIMARKLFVVMAIVFLAPYSPVLQILTTLGIIIVSLVAQISFNPYKNHRMNRLERLSLYATLAMLYCALYFLSD 3321
BLAST of mRNA_M-pyrifera_M_contig89332.20708.1 vs. uniprot
Match: A0A7S3XLM1_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XLM1_HETAK) HSP 1 Score: 91.3 bits (225), Expect = 4.820e-18 Identity = 63/200 (31.50%), Postives = 104/200 (52.00%), Query Frame = 1 Query: 1 YREQVVQSFLVIAFLLHTPISKAAFRIMTCRPVGPTDSSGLDDPRTQLRLSMDMNYIC-TGNTLGRMVGMGLPVVLCFSFGLPIAAWIFLRQQGGSRRVGDPLLRSRLGFYYNGYSPAYFYWESIVLLRKVTLAMVTVLLGPYGGGIQALTALLLILFSLVLQSWAKPYEEGSLNKLELFALVVAAVTLVGGLYVVFDNL 597 YR Q + + +V+ F+++ + + C P+ TD+ L L +D+++ C T + +V +GLP + ++ G+P A LR+ + G+ +RSR F Y+GY ++WE +VLLRKV + V G A+T +++ L VLQ A+P+ + SLN LE +L A T + GLY + DNL Sbjct: 169 YRGQAILTIVVLLFIVYPTVVTETLTLFKCVPLD-TDA---------LYLEIDLDFQCFTDKHILWIVFLGLPALFFYAVGIPAIAMNTLRRHRKELQNGN--IRSRYNFLYDGYREQCYWWEGVVLLRKVAFIALGVSASQIGTTAVAVTGMIVALLVQVLQRHAQPFVDPSLNALEAASLRAALSTSICGLYFLQDNL 356
BLAST of mRNA_M-pyrifera_M_contig89332.20708.1 vs. uniprot
Match: A8IRB8_CHLRE (Predicted protein (Fragment) n=1 Tax=Chlamydomonas reinhardtii TaxID=3055 RepID=A8IRB8_CHLRE) HSP 1 Score: 90.9 bits (224), Expect = 1.090e-17 Identity = 58/198 (29.29%), Postives = 98/198 (49.49%), Query Frame = 1 Query: 10 QVVQSFLVIAFLLHTPISKAAFRIMTCRPVGPTDSS---GLDDPRTQLRLSMDMNYICTGNT-LGRMVGMGLPVVLCFSFGLPIAAWIFLRQQGGSRRVGDPLLRSRLGFYYNGYSPAYFYWESIVLLRKVTLAMVTVLLGPYGGGIQALTALLLILFSLVLQSWAKPYEEGSLNKLELFALVVAAVTLVGGLYVVFD 591 +++ + + I F ++ I+ A + +C V P + G + L + D++ C N L +G+GLP ++ S G P+ +W++LR+ + P GF Y Y+ +YW+S+V+ RK+ + M V L PY +Q LT L +I+ SLV Q PY+ +N+LE +L L LY + D Sbjct: 63 RIIITIIAIVFYVYPDITGAFMELFSCTTVDPEGADVAYGALMEQRGLYWTSDLDLACYHNPHLWLALGVGLPGLILISIGAPVFSWVWLRRHQ-HKLYTSPSFGVSYGFLYEDYNRNCYYWDSVVMARKLFVVMAIVFLAPYSPVLQILTTLGIIIVSLVAQISFNPYKNQRMNRLERLSLYATLAMLYCALYFLSD 259
BLAST of mRNA_M-pyrifera_M_contig89332.20708.1 vs. uniprot
Match: J9IN29_9SPIT (Uncharacterized protein n=1 Tax=Oxytricha trifallax TaxID=1172189 RepID=J9IN29_9SPIT) HSP 1 Score: 90.9 bits (224), Expect = 1.220e-17 Identity = 59/209 (28.23%), Postives = 108/209 (51.67%), Query Frame = 1 Query: 1 YREQVVQSFLVIAFLLHTPISKAAFRIMTCRPVGPTDSSGLDDPRTQLRLSMDMNYIC-TGNTLGRMVGMGLPVVLCFSFGLPIAAWIFL-------------RQQGGSRRVGDPLLRSRLGFYYNGYSPAYFYWESIVLLRKVTLAMVTVLLGPYGGGIQALTALLLILFSLVLQSWAKPYEEGSLNKLELFALVVAAVTLVGGLYVV 585 ++++++ + +V+ FL+H I+KA F C + G+ RL ++ C G L ++ + +P ++ + FG+P A I + + +V ++R+R+GF NG+ F+WE ++L RK+ + MVTVLL Q L L++++ S++L PY LNK+EL++L VA +T+ GG++ V Sbjct: 2547 FKDKLIGTIVVLLFLIHPSIAKALFSAFNCIEI-----EGVS------RLKDNVGMECYQGKHLVYVLVIIIPSLIIWIFGIPFVALIMMFKNKTTIIHMSKSNELSKYDKVKIKVIRTRIGFLLNGFQRNNFFWEILILYRKILIVMVTVLLNSVSAESQVLVVLMILVLSVLLHLNYNPYYTFVLNKMELYSLQVACITMYGGMFYV 2744
BLAST of mRNA_M-pyrifera_M_contig89332.20708.1 vs. uniprot
Match: A0A2K3CPA6_CHLRE (TRP domain-containing protein n=2 Tax=Chlamydomonas reinhardtii TaxID=3055 RepID=A0A2K3CPA6_CHLRE) HSP 1 Score: 90.9 bits (224), Expect = 1.230e-17 Identity = 58/198 (29.29%), Postives = 98/198 (49.49%), Query Frame = 1 Query: 10 QVVQSFLVIAFLLHTPISKAAFRIMTCRPVGPTDSS---GLDDPRTQLRLSMDMNYICTGNT-LGRMVGMGLPVVLCFSFGLPIAAWIFLRQQGGSRRVGDPLLRSRLGFYYNGYSPAYFYWESIVLLRKVTLAMVTVLLGPYGGGIQALTALLLILFSLVLQSWAKPYEEGSLNKLELFALVVAAVTLVGGLYVVFD 591 +++ + + I F ++ I+ A + +C V P + G + L + D++ C N L +G+GLP ++ S G P+ +W++LR+ + P GF Y Y+ +YW+S+V+ RK+ + M V L PY +Q LT L +I+ SLV Q PY+ +N+LE +L L LY + D Sbjct: 3168 RIIITIIAIVFYVYPDITGAFMELFSCTTVDPEGADVAYGALMEQRGLYWTSDLDLACYHNPHLWLALGVGLPGLILISIGAPVFSWVWLRRHQ-HKLYTSPSFGVSYGFLYEDYNRNCYYWDSVVMARKLFVVMAIVFLAPYSPVLQILTTLGIIIVSLVAQISFNPYKNQRMNRLERLSLYATLAMLYCALYFLSD 3364 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig89332.20708.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig89332.20708.1 >prot_M-pyrifera_M_contig89332.20708.1 ID=prot_M-pyrifera_M_contig89332.20708.1|Name=mRNA_M-pyrifera_M_contig89332.20708.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=202bp YREQVVQSFLVIAFLLHTPISKAAFRIMTCRPVGPTDSSGLDDPRTQLRLback to top mRNA from alignment at M-pyrifera_M_contig89332:187..792+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig89332.20708.1 ID=mRNA_M-pyrifera_M_contig89332.20708.1|Name=mRNA_M-pyrifera_M_contig89332.20708.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=606bp|location=Sequence derived from alignment at M-pyrifera_M_contig89332:187..792+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig89332:187..792+ >mRNA_M-pyrifera_M_contig89332.20708.1 ID=mRNA_M-pyrifera_M_contig89332.20708.1|Name=mRNA_M-pyrifera_M_contig89332.20708.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1212bp|location=Sequence derived from alignment at M-pyrifera_M_contig89332:187..792+ (Macrocystis pyrifera P11B4 male)back to top |