mRNA_M-pyrifera_M_contig109809.2046.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig109809.2046.1 vs. uniprot
Match: A0A803N485_CHEQI (Uncharacterized protein n=5 Tax=Chenopodium quinoa TaxID=63459 RepID=A0A803N485_CHEQI) HSP 1 Score: 72.4 bits (176), Expect = 6.230e-14 Identity = 46/108 (42.59%), Postives = 61/108 (56.48%), Query Frame = 1
Query: 4 VPIPDSRGEATLVQKCGFCGERITVDMPSQGVGALVADSDEAEGEQMAVV--EVRGGEIESWS-AGDGWKVVAKGGGVLEDTADLGDGDWADFDEDTDTAVSILEIST 318
VPIP SRG+A LVQKC FCG T+ M + L D EA G+ + ++ + RG E +S GD WK+V G V E+ DL DGDWAD+DE S+ + +
Sbjct: 33 VPIPKSRGQANLVQKCKFCGREGTITMIPKSGRYLTGDDCEA-GKFVPLMSFDCRGLEPVDYSFGGDQWKIVTTAGTVFENV-DLSDGDWADYDEKKKMPTSVSNLQS 138
BLAST of mRNA_M-pyrifera_M_contig109809.2046.1 vs. uniprot
Match: A0A0K9RW51_SPIOL (Uncharacterized protein n=1 Tax=Spinacia oleracea TaxID=3562 RepID=A0A0K9RW51_SPIOL) HSP 1 Score: 72.8 bits (177), Expect = 7.300e-14 Identity = 46/107 (42.99%), Postives = 57/107 (53.27%), Query Frame = 1
Query: 4 VPIPDSRGEATLVQKCGFCGERITVDM-PSQGVGALVADSDEAEGEQMAVVEVRGGEIESWS-AGDGWKVVAKGGGVLEDTADLGDGDWADFDEDTDTAVSILEIST 318
VPIP SRG A LVQKC CG T+ M P G D +E + M + RG E ++S GD WK+V G V E+ DL DGDWAD+DE SI + +
Sbjct: 56 VPIPKSRGNANLVQKCKLCGRDGTITMIPKSGRPLTGDDCEEGKYAPMMSFDCRGLEPVAYSFGGDQWKIVTTAGTVFENV-DLSDGDWADYDEKGKMPTSISNLQS 161
BLAST of mRNA_M-pyrifera_M_contig109809.2046.1 vs. uniprot
Match: A0A812PGA2_9DINO (CZIB protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812PGA2_9DINO) HSP 1 Score: 67.4 bits (163), Expect = 1.220e-11 Identity = 38/100 (38.00%), Postives = 56/100 (56.00%), Query Frame = 1
Query: 19 SRGEATLVQKCGFCGERITVDMPSQGVGALVADSDEAEGEQMAVVEVRGGEIESWSAGDGWKVVAKGGGVLEDTADLGDGDWADFDEDTDTAVSILEIST 318
SRG A L QKC FCG + + G A++ + + + +E RG E SW A G+ V GG +ED D +G+WAD+ EDTD A+++L ++T
Sbjct: 58 SRGTAHLQQKCSFCGCKFNATL---GAAREWAEAGGLDSQTLVDIECRGCEPVSWVAAQGFTVKGAEGGEMEDV-DFSEGEWADYVEDTDEALTVLSVTT 153
BLAST of mRNA_M-pyrifera_M_contig109809.2046.1 vs. uniprot
Match: A0A0J8CWI0_BETVV (Uncharacterized protein n=1 Tax=Beta vulgaris subsp. vulgaris TaxID=3555 RepID=A0A0J8CWI0_BETVV) HSP 1 Score: 63.9 bits (154), Expect = 1.920e-10 Identity = 41/107 (38.32%), Postives = 56/107 (52.34%), Query Frame = 1
Query: 4 VPIPDSRGEATLVQKCGFCGERITVDM-PSQGVGALVADSDEAEGEQMAVVEVRGGEIESWSAG-DGWKVVAKGGGVLEDTADLGDGDWADFDEDTDTAVSILEIST 318
VP+P SRG+A LVQKC FCG + M P G AD + + + + RG E +S G D WKV G V E+ +L GDW D+DE+ VS+ + +
Sbjct: 56 VPLPKSRGQANLVQKCKFCGREGNITMIPKFGRPLTGADCEAGQYAPLMSFDCRGLEPLEYSFGCDQWKVETTAGTVFENV-NLSGGDWVDYDENGSMPVSVDNLKS 161
BLAST of mRNA_M-pyrifera_M_contig109809.2046.1 vs. uniprot
Match: A0A1I7S2T4_BURXY ((pine wood nematode) hypothetical protein n=2 Tax=Bilateria TaxID=33213 RepID=A0A1I7S2T4_BURXY) HSP 1 Score: 61.2 bits (147), Expect = 1.640e-9 Identity = 38/105 (36.19%), Postives = 53/105 (50.48%), Query Frame = 1
Query: 4 VPIPDSRGEATLVQKCGFCGERITVDMPSQGVGALVADSDEAEGEQMAVVEVRGGEIESWSAGDGWKVVAKGGGVLEDTADLGDGDWADFDEDTDTAVSILEIST 318
V IP+SRG A V+KCGFC + TV++ + A V +SDE + E RG E + W+ G DL D WADFDE D V+I+++ +
Sbjct: 53 VEIPNSRGTANYVEKCGFCNKTATVNIVPDSIKA-VKESDEFT--TICKFETRGTEPVEFEISGQWRCEGTESGTKFSEVDLSDA-WADFDEKADAPVTIMDVES 153
BLAST of mRNA_M-pyrifera_M_contig109809.2046.1 vs. uniprot
Match: A0A0R3U1X7_MESCO (Uncharacterized protein n=2 Tax=Mesocestoides corti TaxID=53468 RepID=A0A0R3U1X7_MESCO) HSP 1 Score: 59.7 bits (143), Expect = 7.760e-9 Identity = 40/108 (37.04%), Postives = 55/108 (50.93%), Query Frame = 1
Query: 7 PIPDSRGEATLVQKCGFCGERITVDMPSQGVGALVADSDEAEGEQMAVV---EVRGGEIESWSAGDGWKVVAKGGGV-LEDTADLGDGDWADFDEDTDTAVSILEIST 318
PI SRG L KC FCG + D+ V A E E E+M + E RG E ++S GW+VV+ + D DLG G+WAD+DE D V I ++++
Sbjct: 53 PIKGSRGLTNLKLKCKFCGRENSADIVEGSVKAY----HEEESEKMRPIVRFECRGLEPLTFSPRVGWRVVSSSNSATVFDDVDLGQGEWADYDEAGDQCVEIFDVTS 156
BLAST of mRNA_M-pyrifera_M_contig109809.2046.1 vs. uniprot
Match: F2UMI0_SALR5 (Uncharacterized protein n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2UMI0_SALR5) HSP 1 Score: 53.5 bits (127), Expect = 1.540e-6 Identity = 35/107 (32.71%), Postives = 55/107 (51.40%), Query Frame = 1
Query: 7 PIPDSRGEATLVQKCGFC---GERITVDMPSQGVGALVADSDEAEGEQMAVVEVRGGEIESWSAGDGWKVVAKGGGVLEDTADLGDGDWADFDEDTDTAVSILEIST 318
P+ SRG A V K G +T + +G + + D + +A + RG +I + DG+ V GG V +D DL + +WAD+DE+ D +VSI+E+ T
Sbjct: 51 PLEGSRGTANFVMKWSKSDRKGSSVTKE-EKKGGARFITEDDVGKWVPVAAFDCRGADIIKYHPRDGFTVTTTGGAVFKDV-DLSE-EWADYDEENDLSVSIMEVET 154
BLAST of mRNA_M-pyrifera_M_contig109809.2046.1 vs. uniprot
Match: W7TRG8_9STRA (Uncharacterized protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7TRG8_9STRA) HSP 1 Score: 50.4 bits (119), Expect = 2.130e-5 Identity = 27/67 (40.30%), Postives = 45/67 (67.16%), Query Frame = 1
Query: 118 SDEAEGEQMAVVEVRGGEIESWSAGDGWKVVAKGGGVLEDTADLGDGDWADFDEDTDTAVSILEIST 318
SD + +A +E RG ++E+W D + VV++GG E A+L DGD+ ++DE+ + AVS+LE++T
Sbjct: 81 SDSGAFQTVARIEARGVDVEAWRVRDDFVVVSEGGTRFE-AANLVDGDYTEYDEEHNQAVSVLEVAT 146 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig109809.2046.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 8
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig109809.2046.1 >prot_M-pyrifera_M_contig109809.2046.1 ID=prot_M-pyrifera_M_contig109809.2046.1|Name=mRNA_M-pyrifera_M_contig109809.2046.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=106bp RVPIPDSRGEATLVQKCGFCGERITVDMPSQGVGALVADSDEAEGEQMAVback to top mRNA from alignment at M-pyrifera_M_contig109809:4..321+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig109809.2046.1 ID=mRNA_M-pyrifera_M_contig109809.2046.1|Name=mRNA_M-pyrifera_M_contig109809.2046.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=318bp|location=Sequence derived from alignment at M-pyrifera_M_contig109809:4..321+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig109809:4..321+ >mRNA_M-pyrifera_M_contig109809.2046.1 ID=mRNA_M-pyrifera_M_contig109809.2046.1|Name=mRNA_M-pyrifera_M_contig109809.2046.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=636bp|location=Sequence derived from alignment at M-pyrifera_M_contig109809:4..321+ (Macrocystis pyrifera P11B4 male)back to top |