mRNA_M-pyrifera_M_contig8786.20412.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig8786.20412.1 vs. uniprot
Match: D7FNY3_ECTSI (DNA-directed RNA polymerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNY3_ECTSI) HSP 1 Score: 734 bits (1896), Expect = 1.050e-259 Identity = 407/582 (69.93%), Postives = 453/582 (77.84%), Query Frame = 1 Query: 1 CVSEAFQSSLQAFLDSDPPSLKGVVSGQDAGGVAPGDGKYAP-PVSLKEAFQVLMWVKYMRCLATPGETVGSIAAQSVGEPSTQMTLNTFHLAGHGGANVTLGIPRLREIIMTAAKSLKTPSTVVPLRKGASREAANSLALRLSRLSLSLLLHNKGGIVVRERLVKGDTGLWERHYAVCLRIFPSKLTKQAFGIDFKTVCRIISSLFVPNLLSVIAADLRRTGTRISEAAGTTTKVPSQ----PSGKGEEQEDGGTEDAGFARQALRDSMKKARKADADYESDDEDEEQGTLKFGKQKEQASYGGMDEEEKAIWKAMSGKEGDGFLDGDESDGGHDGYDQKGTDTAGSFVGDRNEDDKDYFNLPASLSSARHFKGITKNKKAGEVEITVRLPASMRRLLMVGLAETAAEKTMVRSHRGIGGAFVVDVITDGKSGVAVQLEGSSFETVWQLKEGGEDGILDLNKLTSNDVYAVGQTYGVEAARASIVAEITNVFGAYGIAVDPRHLGLVADHMTFNGGYRAMNRMGMSDFSSPCLQMSFETTAEFMTKAAVAGNSDKLKSPSARIVMGRVGDFGTGMFNLLQP 1731 CVSEAFQ SLQAFLDS+P SL+G + +++ VA P P SLKEAF++LMWVKYMRCLA PGETVGSIAAQSVGEPSTQMTLNTFHLAGHGGANVTLGIPRLREIIMTAAK+LKTPS VVPLR+GA R AA SLALRLSRL LS LL N+GGIVVRERLVKGDTGLWERHYA+CL++F + AF I FK +CR IS +FVPNLLS IA DLRRTG ++S+ G+T + S+ EQGTLKFGKQKEQ+SYGGMDEEEKAIWKAMSGKE DG + GD+ D +G G D VG +DDKDYFNLP +LS ARHFKGITKNKK GEVE+TVRLP+SMRRLLMVGLAE+AA KTMVRSH+GI GAFVV+ DGKSG+AVQLEGS FETVWQLKEGG DGIL+LNKLTSND++AV QTYGVEAARASIVAEIT VFGAYGIAVDPRHLGLVADHMTF+GGYR +NR GM+DFSSPCLQMSFETT +FM KAAVA +SD+LKSPSARIVMGRVG+FGTGMF+L QP Sbjct: 64 CVSEAFQKSLQAFLDSNPASLRGDHTKENSKAVAASGTSSPPGPGSLKEAFELLMWVKYMRCLANPGETVGSIAAQSVGEPSTQMTLNTFHLAGHGGANVTLGIPRLREIIMTAAKNLKTPSMVVPLREGADRPAAKSLALRLSRLPLSQLLDNRGGIVVRERLVKGDTGLWERHYAICLKLFSPSIISMAFDISFKELCRKISGVFVPNLLSAIANDLRRTGNKLSQTGGSTVGMASRGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEQGTLKFGKQKEQSSYGGMDEEEKAIWKAMSGKEADGGVLGDDGDDDEEGI---GGDDG---VGKEKDDDKDYFNLP-NLSGARHFKGITKNKKTGEVEVTVRLPSSMRRLLMVGLAESAAAKTMVRSHKGIRGAFVVETTVDGKSGLAVQLEGSDFETVWQLKEGGVDGILNLNKLTSNDIWAVCQTYGVEAARASIVAEITGVFGAYGIAVDPRHLGLVADHMTFDGGYRPLNRAGMADFSSPCLQMSFETTTDFMAKAAVARSSDRLKSPSARIVMGRVGNFGTGMFDLRQP 638
BLAST of mRNA_M-pyrifera_M_contig8786.20412.1 vs. uniprot
Match: A0A6H5KJ16_9PHAE (DNA-directed RNA polymerase subunit n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJ16_9PHAE) HSP 1 Score: 766 bits (1977), Expect = 1.710e-256 Identity = 420/581 (72.29%), Postives = 473/581 (81.41%), Query Frame = 1 Query: 1 CVSEAFQSSLQAFLDSDPPSLKGVVSGQDAGGVAPGDGKYAPPV--SLKEAFQVLMWVKYMRCLATPGETVGSIAAQSVGEPSTQMTLNTFHLAGHGGANVTLGIPRLREIIMTAAKSLKTPSTVVPLRKGASREAANSLALRLSRLSLSLLLHNKGGIVVRERLVKGDTGLWERHYAVCLRIFPSKLTKQAFGIDFKTVCRIISSLFVPNLLSVIAADLRRTGTRISEAAGTTTKVPSQPSGKGEE--QEDGGTEDAGFARQALRDSMKKARKADADYESDDEDEEQGTLKFGKQKEQASYGGMDEEEKAIWKAMSGKEGDGFLDGDESDGGHDGYDQKGTDTAGSFVGDRNEDDKDYFNLPASLSSARHFKGITKNKKAGEVEITVRLPASMRRLLMVGLAETAAEKTMVRSHRGIGGAFVVDVITDGKSGVAVQLEGSSFETVWQLKEGGEDGILDLNKLTSNDVYAVGQTYGVEAARASIVAEITNVFGAYGIAVDPRHLGLVADHMTFNGGYRAMNRMGMSDFSSPCLQMSFETTAEFMTKAAVAGNSDKLKSPSARIVMGRVGDFGTGMFNLLQP 1731 CVSEAFQ SLQAFLDS+P SL+G + D+ G+ + P SLKEAF++LMWVKYMRCLA PGETVGSIAAQSVGEPSTQMTLNTFHLAGHGGANVTLGIPRLREIIMTAAK+LKTPS VVPLR+GA R A SLA RLSRL LS LL N+GGIVVRERLVK +TGLWERHY VCLR+F + AF I FK +CR IS +FVPNLLS IA DLRRTG ++S+ G + +P P G+GE E+ E A KKA KA+A+YESDDEDEEQGTLKFGKQKEQ+SYGGMDEEEKAIWKAMSGKE +G + G+E DG DG D +G A D+N DD+DYFNLP ++S ARH KGITKNKK GEVE+TVRLP+SMRRLLMVGLAE+AA KTMVRSH+GI GAFVVD+ +GKSG+AVQLEGS FETVWQLKEGG DGIL+L+KLTSND++AV QTYGVEAARASIV+EIT VFGAYGIAVDPRHLGLVADHMTF+GGYR +NR GM+DFSSPCLQMSFETT +FM KAAVA +SD+LKSPSARIVMGRVG FGTGMF+L QP Sbjct: 1293 CVSEAFQKSLQAFLDSNPASLRGDHT-NDSSKAGAATGRLSSPGVRSLKEAFELLMWVKYMRCLANPGETVGSIAAQSVGEPSTQMTLNTFHLAGHGGANVTLGIPRLREIIMTAAKNLKTPSMVVPLREGADRSTARSLARRLSRLPLSQLLDNRGGIVVRERLVKENTGLWERHYVVCLRLFRPSIISMAFDISFKELCRKISGVFVPNLLSAIANDLRRTGNKLSQTGGASVGLP--PRGRGERAGDEEDDLEGQISAIPQSNAGAKKASKAEAEYESDDEDEEQGTLKFGKQKEQSSYGGMDEEEKAIWKAMSGKEANGGVLGEE-DGDDDGNDDEGMGGADGVGNDKN-DDRDYFNLP-NISGARHLKGITKNKKTGEVEVTVRLPSSMRRLLMVGLAESAAAKTMVRSHKGIRGAFVVDMTVEGKSGLAVQLEGSDFETVWQLKEGGVDGILNLDKLTSNDIWAVCQTYGVEAARASIVSEITGVFGAYGIAVDPRHLGLVADHMTFDGGYRPLNRAGMADFSSPCLQMSFETTTDFMAKAAVARSSDRLKSPSARIVMGRVGSFGTGMFDLRQP 1867
BLAST of mRNA_M-pyrifera_M_contig8786.20412.1 vs. uniprot
Match: A0A836C8M0_9STRA (DNA-directed RNA polymerase subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8M0_9STRA) HSP 1 Score: 497 bits (1280), Expect = 2.590e-156 Identity = 288/580 (49.66%), Postives = 376/580 (64.83%), Query Frame = 1 Query: 4 VSEAFQSSLQAFLDSDPPSLKGVVSGQDAGGVAPGDGKYAPPVSLKEAFQVLMWVKYMRCLATPGETVGSIAAQSVGEPSTQMTLNTFHLAGHGGANVTLGIPRLREIIMTAAKSLKTPSTVVPLRKGASREAANSLALRLSRLSL-SLLLHNKGGIVVRERLVKGDTGLWERHYAVCLRIFPSKLTKQAFGIDFKTVCRIISSLFVPNLLSVIAADLRRTGTRISEAAGTTTKVPSQPSGKGEEQEDGGTEDAGFARQALRDSMKKARKADADYESDDEDEE-QGTLKFGKQKEQASYGGMDEEEKAIWKAMSGKEGDGFLDGDESDGGHDGYDQKGTDTAGSFVGDRNEDDKDYFNLPASLSSARHFKGITKNKKAGEVEITVRLPASMRRLLMVGLAETAAEKTMVRSHRGIGGAFVVDVITDGKSGVAVQLEGSSFETVWQL--KEGGEDGILDLNKLTSNDVYAVGQTYGVEAARASIVAEITNVFGAYGIAVDPRHLGLVADHMTFNGGYRAMNRMGMSDFSSPCLQMSFETTAEFMTKAAVAGNSDKLKSPSARIVMGRVGDFGTGMFNLLQP 1731 VSE F + L+AF+ ++ +G++SG+ + ++ F V+MWVKYMR LA PGE VG+IA QSVGEPSTQMTLNTFHLAGHGGANVTLGIPRLREI+MTA+++LKTP+ VPL +G SR +LA L+RL L LLL+ GG+ VRE+L KGDTGLWERHY + LR+FP+K +AF + FK +CR IS FVP LL ++A +LRR G E A +K + A+ + D DEE QGTLKFG++KEQASYG MD++EK +WKAM GK GD D+ D D +G GD +D D+ +L + + + F + NK + V +T++ PAS+RRLLMVG+AE AA ++VRSH IG +F+V+ + G++ +A+Q EG+ F T+W L +EGG +LDL +L SN +Y + +YGVEA RA+I EI VF YGI VD RHLGL+AD+MTF GGYRAMNR+GM D +SP LQMSFETTA F+ +AA+ +KLKSPSARIVMG+VGDFGTG F+L+ P Sbjct: 1123 VSERFHARLEAFMAAES-HRRGLLSGRRG-------------AAARDDFTVMMWVKYMRSLAAPGEAVGAIAGQSVGEPSTQMTLNTFHLAGHGGANVTLGIPRLREIVMTASRALKTPAATVPLLRGVSRAQGEALARLLTRLPLLELLLNTGGGVTVREKLGKGDTGLWERHYVIALRLFPAKKILKAFSLTFKQLCRAISQTFVPRLLRLVATELRRCG----ELAAARSK-----------------------KSAVSKAKXXXXXXXXXXXXDSGDEEGQGTLKFGRKKEQASYGDMDDDEKEMWKAMKGKGGDPLNSDDDGDDASDDGRSRGDGQTTQLDGDE-QDGLDFLDLSTGVKNNQMFGRMDFNKASNTVTVTLKFPASVRRLLMVGIAEAAAATSVVRSHGKIGRSFLVEQLIGGENRMALQTEGADFATLWALGPREGGT--LLDLPQLASNHIYGMLMSYGVEACRAAITKEIAAVFAVYGIGVDARHLGLIADYMTFYGGYRAMNRIGMKDIASPFLQMSFETTASFLVQAALDSKVEKLKSPSARIVMGQVGDFGTGQFDLMVP 1658
BLAST of mRNA_M-pyrifera_M_contig8786.20412.1 vs. uniprot
Match: W7TZA0_9STRA (DNA-directed RNA polymerase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TZA0_9STRA) HSP 1 Score: 390 bits (1001), Expect = 1.210e-118 Identity = 256/604 (42.38%), Postives = 359/604 (59.44%), Query Frame = 1 Query: 4 VSEAFQSSLQAFLDSDPPSL--KGVVSGQDAGGVAPGDGKYAPPVSLKEAFQVLMWVKYMRCLATPGETVGSIAAQSVGEPSTQMTLNTFHLAGHGGANVTLGIPRLREIIMTAAKSLKTPSTVVPLRKGASREAANSLALRLSRLSL-SLLLHNKGGIVVRERLVK-GDTGL-WERHYAVCLRIFPSKLTKQAFGIDFKTVCRIISSLFVPNLLSVIAADLRRTGTR-----ISEAAGTTTKVPSQPSGKGEEQEDGGTEDAG--------FARQALRDSMKKARKADADYESDDE-------DEEQGTLKFGKQKEQASYGGMDEEEKAIWKAMSGKEGDGFLDGDESDGGHDGYDQKGTDTAGSFVGDRNEDDKDYFNLPASLSSARH--FKGITKNKKAGEVEITVRLPASMRRLLMVGLAETAAEKTMVRSHRGIGGAFVVDVITDGKSG-VAVQLEGSSFETVWQLKEGGEDGILDLNKLTSNDVYAVGQTYGVEAARASIVAEITNVFGAYGIAVDPRHLGLVADHMTFNGGYRAMNRMGMSDFSSPCLQMSFETTAEFMTKAAVAGNSDKLKSPSARIVMGRVGDFGTGMFNLLQP 1731 +SE FQ +++ +L DP L K + G + K ++L+W+KYMR L +PGE VGSIA QS+GEPSTQMTLNTFHLAGHGGANVTLGIPRLREIIMTA+++ KTPS V L SR A L+ RL RL L ++ H +G ++V+ERL + +G+ W+R+Y V LR+ ++ ++AFG+ + + +I++ FV LL+ + A+LR+ +R + E G ++ SG+ E E T G AR + S K A D D E D DE QGTL FG+++E+ Y +EE+ + + GD++ G +G + G S V + F+ A+++ H F+ + ++ G IT++ AS RRLLMV + E AAE+ V +GI AFVV+ GK G ++Q EG + +W++ D LDLN +TSND++A+ QTYGVEAARA+IV EI VFGAYGIAVDPRHLGLVAD MT+ GG+RA+NR+GMS+ SSP LQMSFETTA F+T+AA+ D L++PSA++VMG+ GTG F+++ P Sbjct: 691 ISERFQDAIEDYLGRDPEHLFQKSEMGGSKS----------------KAGLELLLWLKYMRSLTSPGEAVGSIAGQSIGEPSTQMTLNTFHLAGHGGANVTLGIPRLREIIMTASRNPKTPSMTVSLCTSISRSEAQRLSARLRRLQLLEVVHHTQGSVLVKERLGRCASSGVTWQRYYTVSLRLHDEEVLQEAFGLSHEEMFEVIATRFVRQLLASVTAELRKVASRDVVRLLKERRGNAADAEARESGEASEDEADMTGLIGGRGPGMKAAARAGAKTSPKLAA-MDVDGEEDXXXXXXXXGDEAQGTLSFGRKEERGEYEPDEEEDPSE------------VVGDDASGIEEGVENSGEGQL-SEVPAKQRRSGSRFDDVAAVAKIDHPFFENLRFERETGVAHITLKTRASHRRLLMVSIVEAAAERCTVHVSKGIAQAFVVE----GKDGRCSIQTEGCNLSELWEVG----DAALDLNNITSNDIWAMHQTYGVEAARATIVKEIKGVFGAYGIAVDPRHLGLVADFMTYQGGFRALNRIGMSEVSSPFLQMSFETTATFLTEAALNSEKDDLQTPSAKLVMGQPTGNGTGSFDIMIP 1256
BLAST of mRNA_M-pyrifera_M_contig8786.20412.1 vs. uniprot
Match: K8YRY5_NANGC (DNA-directed RNA polymerase subunit n=2 Tax=Monodopsidaceae TaxID=425072 RepID=K8YRY5_NANGC) HSP 1 Score: 386 bits (991), Expect = 5.380e-115 Identity = 255/604 (42.22%), Postives = 356/604 (58.94%), Query Frame = 1 Query: 4 VSEAFQSSLQAFLDSDPPSL--KGVVSGQDAGGVAPGDGKYAPPVSLKEAFQVLMWVKYMRCLATPGETVGSIAAQSVGEPSTQMTLNTFHLAGHGGANVTLGIPRLREIIMTAAKSLKTPSTVVPLRKGASREAANSLALRLSRLSL-SLLLHNKGGIVVRERLVK-GDTGL-WERHYAVCLRIFPSKLTKQAFGIDFKTVCRIISSLFVPNLLSVIAADLRRTGTR-----ISEAAGTTTKVPSQPSGKGEEQEDGGTEDAG--------FARQALRDSMKKARKADADYESDDE-------DEEQGTLKFGKQKEQASYGGMDEEEKAIWKAMSGKEGDGFLDGDESDGGHDGYDQKGTDTAGSFVGDRNEDDKDYFNLPASLSSARH--FKGITKNKKAGEVEITVRLPASMRRLLMVGLAETAAEKTMVRSHRGIGGAFVVDVITDGKSG-VAVQLEGSSFETVWQLKEGGEDGILDLNKLTSNDVYAVGQTYGVEAARASIVAEITNVFGAYGIAVDPRHLGLVADHMTFNGGYRAMNRMGMSDFSSPCLQMSFETTAEFMTKAAVAGNSDKLKSPSARIVMGRVGDFGTGMFNLLQP 1731 +SE FQ +++ +L DP L K + G + K ++L+W+KYMR L +PGE VGSIA QS+GEPSTQMTLNTFHLAGHGGANVTLGIPRLREIIMTA+++ KTPS VPL SR A L+ RL RL L ++ H +GG++V+ERL + +G+ W+R+Y V LR+ ++ ++AFG+ + + +I++ FV LL+ + A+LR+ +R + E G ++ SG+ E E T G AR + S K A D D E DE QGTL FG+++E+ Y + +E +G E+ G + S V + + F+ A+++ H F+ + ++ G IT++ AS RRLLMV + E AAE+ VR +GI AFVV+ GK G ++Q EG + +W++ D LDLN +TSND++A+ QTYGVEAARA+IV EI VFGAYGIAVDPRHLGLVAD MT+ GG+RA+NR+GMS+ SSP LQMSFETTA F+T+AA+ D L++PSA++VMG+ GTG F+++ P Sbjct: 1281 ISERFQDAIEDYLGRDPEHLFQKSEMGGSKS----------------KAGLELLLWLKYMRSLTSPGEAVGSIAGQSIGEPSTQMTLNTFHLAGHGGANVTLGIPRLREIIMTASRNPKTPSMTVPLCTSISRSEAQRLSARLRRLQLLEVVHHTQGGVLVKERLGRCASSGVTWQRYYTVSLRLHDEEVLQEAFGLSHEEMFEVIATRFVRQLLASVTAELRKVASRDVVRLLKERRGNAADAEARESGEASEDEADMTGLVGGRGPGMKAAARAGAKTSPKLAA-MDVDGEEXXXXXXXXXGDEAQGTLSFGRKEERGEY---EPDEXXXXXXXXXXXXXXIEEGVENSG----------EGQLSEVPAKQRRNGSRFDDVAAVAKIDHPFFENLRFERETGVAHITLKTRASHRRLLMVSIVEAAAERCTVRVSKGIAQAFVVE----GKDGRCSIQTEGCNLSELWEVG----DAALDLNNITSNDIWAMHQTYGVEAARATIVKEIKGVFGAYGIAVDPRHLGLVADFMTYQGGFRALNRIGMSEVSSPFLQMSFETTATFLTEAALNSEKDDLQTPSAKLVMGQPTGNGTGSFDIMIP 1846
BLAST of mRNA_M-pyrifera_M_contig8786.20412.1 vs. uniprot
Match: K3X8S6_GLOUD (DNA-directed RNA polymerase subunit n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X8S6_GLOUD) HSP 1 Score: 355 bits (912), Expect = 2.280e-104 Identity = 226/549 (41.17%), Postives = 314/549 (57.19%), Query Frame = 1 Query: 142 EAFQVLMWVKYMRCLATPGETVGSIAAQSVGEPSTQMTLNTFHLAGHGGANVTLGIPRLREIIMTAAKSLKTPSTVVPLRKGASREA-ANSLALRLSRLSLSLLLHNKGGIVVRERLVKGDTG-LWERHYAVCLRIFPSKLTKQAFGIDFKTVCRIISSLFVPNLLSVIAADLRRTGTRISEAAGTTTKVPSQPSGKGEEQEDGGTEDAGFARQALRDSMKKARKADADYESDDEDEEQGTLKFGKQKEQASYGGMDEEEKAIWKAMSGKE---------------GDGFLDGDESDGGHDGYDQKGTDTAGSFVGDRNEDDKDYFNLPASLSSARHFKGITKNKKAGEVEITVRLPASMRRLLMVGLAETAAEKTMVRSHRGIGGAFVVDV-ITDGKSGV-AVQLEGSSFETVWQLKEGGEDGILDLNKLTSNDVYAVGQTYGVEAARASIVAEITNVFGAYGIAVDPRHLGLVADHMTFNGGYRAMNRMGMSDFSSPCLQMSFETTAEFMTKAAVAGNSDKLKSPSARIVMGRVGDFGTGMFNLLQP 1731 +AFQ+L+WV Y+R +A PGE VG + AQS+GEPSTQMTLNTFHLAGHG ANVTLGIPRLREIIMTA++ + TP +PL K +A A + RL++++LS L+ N+ G+ V++ +K + G LW R Y + L +F K K+AFG+ V I F+ LLSV++ +++++G +S +A T AGF S EQGTL+FG + E YG MDEE+K I A G GDE D D + G+ SFV D E N+P S+ ++F +N K VE +R P + LLMV + E A++ +V+ GI ++++ I D + +Q EG +F+ +W D ILD+N+L +ND+Y V QTYGVEAARASI +I +VFG YGI+VDPRHL L+AD+MT GGY +NRMGM++ S Q++FET+ +F+T+AA+ G SD L+SPSARI++G+ GTG F+LLQP Sbjct: 1309 DAFQLLVWVNYLRSMANPGENVGVLCAQSIGEPSTQMTLNTFHLAGHGAANVTLGIPRLREIIMTASEKMSTPMMTIPLLKNDKAQARAQEVEQRLNQVALSELISNQRGVSVKDEFLKSENGILWVRDYTIRLTLFKLKYIKKAFGLTSDDVYNAIGKGFIQKLLSVLSREMKKSG--VSVSAIETNNF------------------AGFG------SSXXXXXXXXXXXXXXXXXEQGTLRFGSRGEVNGYGEMDEEDKKIQNAQDSXXXXXXXXXXXXXXXXTAGGNTSGDEGDA-MDSSNMSGSKKTKSFVADGLES----LNVPISVRKNKYFMYAGRNTKEHFVEFRLRFPTHSKTLLMVPIVERVAKQVLVQHCPGISRCYLINQRIGDAQEETPCIQTEGLNFQEIWSF-----DDILDVNQLATNDIYQVLQTYGVEAARASISKQINDVFGVYGISVDPRHLSLLADYMTAQGGYMPLNRMGMNNKGSSMQQITFETSMKFLTQAALGGLSDNLESPSARIILGQPPRVGTGSFSLLQP 1821
BLAST of mRNA_M-pyrifera_M_contig8786.20412.1 vs. uniprot
Match: A0A7S3HIX0_9STRA (DNA-directed RNA polymerase n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HIX0_9STRA) HSP 1 Score: 336 bits (862), Expect = 1.640e-103 Identity = 246/608 (40.46%), Postives = 323/608 (53.12%), Query Frame = 1 Query: 4 VSEAFQSSLQAFLDSDPPSLKGVVSGQDAGGVAPGDGKYAPPVSLKEAFQVLMWVKYMRCLATPGETVGSIAAQSVGEPSTQMTLNTFHLAGHGGANVTLGIPRLREIIMTAAKSLKTPSTVVPLRKGASREAANSLALRLSRLSLSLLLHNKGGIVVRERLVKGDTGL-WERHYAVCLRIFPSKLTKQAFGIDFKTVCRIISSLFVPNLLSVIAADLRRTGTRISEAAGTTTKVPSQPSGKGEEQEDG------------GTEDAGFARQAL---RDSMKKARKADADYESDDEDEEQ--------GTLKF--GKQKEQASYGGMDEEEKAIWKAMSGKEGDGFLD-GDESDGGHDGYDQKGTDTAGSFVGDRNEDDKDYFNLPASLSSARHFKGITK-----NKKAGEVEITVRLPASMRRLLMVGLAETAAEKTMVRSHRGIGGAFVVDVITDGKSGVAVQLEGSSFETVWQLKEGGEDGILDLNKLTSNDVYAVGQTYGVEAARASIVAEITNVFGAYGIAVDPRHLGLVADHMTFNGGYRAMNRMGMSDFSSPCLQMSFETTAEFMTKAAVAGNSDKLKSPSARIVMGRVGDFGTGMFNLLQP 1731 VSEA Q ++ ++ +P GV++ A GD + ++L+WVKY+R +A PGE VG +AAQSVGEPSTQMTLNTFHLAGHGGANVTLGIPRLREIIMTA+++LKTP+ P+ AA +LA +LSRL LS LL ++GGIVV E++ + G WER Y + L ++ + FG F TV +F L +I + RR G + K P G+G+ G G + A R + KK KA D ESDD D E G LK G +KEQ Y +E + + GK DG D E AS + A + N++ G E+ + A RRLLM L+E AA TMVRS + I A+ VD +G++ AV EG +FE +W ++E G++ +N++ SND++ + TYGVEAAR SIVAEI NVFG YGI VDPRHL L+AD MT NG + +NR GM+ SP L+MSFE+T F+TKAA G SD L+SPSARIV+G GTG F+L+ P Sbjct: 98 VSEALQQKVRDYVKKNPD---GVITDVGADTTVTGD-----------SLELLVWVKYLRSMACPGEAVGCVAAQSVGEPSTQMTLNTFHLAGHGGANVTLGIPRLREIIMTASRNLKTPTMYAPMCVPRDNIAAKALARKLSRLPLSQLLSHQGGIVVGEQIRRATAGSRWERIYRIRLNFEKAERIQAVFGCSFDTVVGAFKGIFTAKLDRLIKLEQRRAGDSTAGGMNEILKSMKGP-GEGKSATGGXXXXXXXXXRRRGGKSASXXXXXXGTGRGNSKKGAKAAEDSESDDSDXEADQENNDDLGNLKLSGGTRKEQ-DYENDEESADEAGEDIDGKGPDGTTDESSEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAASKAGANLLSAFRRDTFNYNEEEGWAEVELSFHARARRLLMAQLSEQAAAATMVRSTKSITNAYAVD--EEGQA--AVVTEGVNFEALWAMRE----GLIKVNEIKSNDIWQLLCTYGVEAARHSIVAEIKNVFGVYGINVDPRHLSLIADFMTRNGSFTPLNRAGMNSCPSPFLRMSFESTCTFLTKAAQEGQSDNLQSPSARIVLGTTAKVGTGCFDLMLP 681
BLAST of mRNA_M-pyrifera_M_contig8786.20412.1 vs. uniprot
Match: A0A5D6XPF2_9STRA (DNA-directed RNA polymerase subunit n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XPF2_9STRA) HSP 1 Score: 345 bits (884), Expect = 1.350e-100 Identity = 219/548 (39.96%), Postives = 313/548 (57.12%), Query Frame = 1 Query: 142 EAFQVLMWVKYMRCLATPGETVGSIAAQSVGEPSTQMTLNTFHLAGHGGANVTLGIPRLREIIMTAAKSLKTPSTVVPLRKGASREAANSLALRLSRLSLSLLLHNKGGIVVRERLVKGDTG-LWERHYAVCLRIFPSKLTKQAFGIDFKTVCRIISSLFVPNLLSVIAADLRRTGTRISEAAGTTTKVPSQPSGKGEEQEDGGTEDAGFARQALRDSMKKARKADADYESDDEDEEQGTLKFGKQKEQASYGGMDEEEK---------------AIWKAMSGKEGDGFLDGDESDGGHDGYDQKGTDTAGSFVGDRNEDDKDYFNLPASLSSARHFKGITKNKKAGEVEITVRLPASMRRLLMVGLAETAAEKTMVRSHRGIGGAFVVDV-ITDGKSGV-AVQLEGSSFETVWQLKEGGEDGILDLNKLTSNDVYAVGQTYGVEAARASIVAEITNVFGAYGIAVDPRHLGLVADHMTFNGGYRAMNRMGMSDFSSPCLQMSFETTAEFMTKAAVAGNSDKLKSPSARIVMGRVGDFGTGMFNLLQP 1731 +AFQ+L+WV Y+R +A PGE VG IAAQS+GEPSTQMTLNTFHLAGHG ANVTLGIPRLREIIMTA++ + TP +PL A+ + RL++++L+ LL N+ G+ VR+ V + G LW R Y + L +F K K+AFG+ V + F+ LLS I+ +++++G ++ AA T G +AG +EQGTL+FG ++E Y DE+E+ A K G + DE G G K + A + G + ++P S+ ++F +N KA VE+ +R P + +LMV L E A++ +V+ GI ++++ + D + VQ EG +F+ +W D ILD+N+L +ND++ V QTYGVEAARASI +I +VFG YGI+VDPRHL L+AD+MT GGY +NRMGM++ S Q++FET+ +F+T+AA+AGNSD L+SPSARI++G+ GTG F+LLQP Sbjct: 1322 DAFQLLVWVNYLRSMANPGENVGVIAAQSIGEPSTQMTLNTFHLAGHGAANVTLGIPRLREIIMTASEKMSTPMMTIPLLAHVPAARAHEVEQRLNQVALAELLSNERGVAVRDEFVPSENGILWVRDYTIRLTLFKLKQIKRAFGLSADDVFGAVGKNFIGKLLSFISREMKKSGVSVAAAAEATNNFAGSTRGT----------NAGXXXXXXXXXXX---------------DEQGTLRFGSRREVQGYEMDDEDEQLRQAQDDSDXXXXXXARSKKARGAKRASVGPADEEATGS-GAKSKKSGMATALAGGL-----EALDVPMSVRKNKYFVYCGRNTKAHYVELRLRFPTHSKTVLMVPLVERVAKQVLVQHCPGISRCYLINQRLGDAQDETPCVQTEGLNFQEIWAF-----DDILDVNQLATNDIFQVLQTYGVEAARASISKQINDVFGVYGISVDPRHLSLLADYMTAYGGYMPLNRMGMNNKGSALQQITFETSMKFLTQAALAGNSDNLESPSARIILGQPPRVGTGSFSLLQP 1833
BLAST of mRNA_M-pyrifera_M_contig8786.20412.1 vs. uniprot
Match: A0A1V9ZEK2_9STRA (DNA-directed RNA polymerase subunit n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZEK2_9STRA) HSP 1 Score: 343 bits (880), Expect = 4.010e-100 Identity = 225/592 (38.01%), Postives = 332/592 (56.08%), Query Frame = 1 Query: 1 CVSEAFQSSLQAFLDSDPPSLKGVVSGQDAGGVAPGDGKYAPPVSLKEAFQVLMWVKYMRCLATPGETVGSIAAQSVGEPSTQMTLNTFHLAGHGGANVTLGIPRLREIIMTAAKSLKTPSTVVPLRKGASREAANSLALRLSRLSLSLLLHNKGGIVVRERLVKGDTG-LWERHYAVCLRIFPSKLTKQAFGIDFKTVCRIISSLFVPNLLSVIAADLRRTGTRISEAAGTTTKVPSQPSGKGEEQEDGGTEDAGFARQALRDSMKKARKADADYESDDEDEEQGTLKFGKQKEQASYGGMDEEEKAIWKAMSGKEGDGFLDGDESDGGHDGYDQKGTDTAGSFVGDRNEDDKDY------------FNLPASLSSARHFKGITKNKKAGEVEITVRLPASMRRLLMVGLAETAAEKTMVRSHRGIGGAFVVDVITD--GKSGVAVQLEGSSFETVWQLKEGGEDGILDLNKLTSNDVYAVGQTYGVEAARASIVAEITNVFGAYGIAVDPRHLGLVADHMTFNGGYRAMNRMGMSDFSSPCLQMSFETTAEFMTKAAVAGNSDKLKSPSARIVMGRVGDFGTGMFNLLQP 1731 CVSE Q ++ + ++P +L + G V+ AF++++WVKYMR L PGE VG+I AQS+GEPSTQMTLNTFHLAGHG ANVTLGIPRLREIIMTA+K + TP +P+ A+ A ++ +L+++ L+ L+ N GI V+++ ++ + LW R Y + L F KL ++AFGI K + R FV LL+++ ++R++G ++S G+ + V S+ + + E+ E ++A+ D QGTLKFG QKE A YG MD+++ I KA + + D DES +K GS + + DD+D N+ +++ +F G N E+ +R PA+ + LL+V L E A + +VRS GI + V D GK +Q +G +FE +W+L D +LD+N+L +ND+Y V YGVEAARASI +I +VFG YGI+VDPRHL L+AD+MT G Y +NR GM+ S Q++FET+ +F+T+AA D + PSAR+V+G+ GTG+F+L+ P Sbjct: 1211 CVSEKTQQHIETYSKANPSNLLESKKNKIGGVVS------------SSAFRLMVWVKYMRSLCQPGENVGTICAQSIGEPSTQMTLNTFHLAGHGAANVTLGIPRLREIIMTASKKMSTPMMTIPVLPTATPAQAVAVEQKLNQVPLAELIRNTKGIRVQDQFLESENRVLWCREYTIRLYFFKPKLIREAFGITTKEIQRAFGKSFVSRLLTLLKHEMRKSGVQVSVENGSMS-VRSKDNIEEEDAE----------------PTRRAKXXXXXXXXXXXD--QGTLKFGSQKEAAGYGEMDDDDVEIQKAQNTDD----QDMDESA-------EKSKQADGSDT-ENSSDDEDVAPIKVIKGELKPVNVTDTVNKNPYFAGAGVNTTEHYGELKLRFPANFKTLLLVPLIEKIASQVLVRSCDGISRCYTVKQRLDKSGKEEQCIQTQGLNFEAIWEL-----DHVLDVNRLVTNDIYQVLLNYGVEAARASISKQIQDVFGVYGISVDPRHLSLLADYMTHYGDYMPLNRSGMARKGSSFQQITFETSMKFLTQAATGNFGDNMSGPSARLVLGQPVKLGTGLFSLMTP 1754
BLAST of mRNA_M-pyrifera_M_contig8786.20412.1 vs. uniprot
Match: A0A662Y848_9STRA (DNA-directed RNA polymerase (Fragment) n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662Y848_9STRA) HSP 1 Score: 340 bits (871), Expect = 3.700e-99 Identity = 215/551 (39.02%), Postives = 316/551 (57.35%), Query Frame = 1 Query: 142 EAFQVLMWVKYMRCLATPGETVGSIAAQSVGEPSTQMTLNTFHLAGHGGANVTLGIPRLREIIMTAAKSLKTPSTVVPLRKGASREAANSLALRLSRLSLSLLLHNKGGIVVRERLVKGDTG-LWERHYAVCLRIFPSKLTKQAFGIDFKTVCRIISSLFVPNLLSVIAADLRRTGTRISEAAGTTTKVPSQPSGKGEEQEDGGTEDAGFARQALRDSMKKARKADADYESDDEDEEQGTLKFGKQKEQASYGGMDEEEKAIWKA-MSGKEGDGFLD-----------------GDESDGGHDGYDQKGTDTAGSFVGDRNEDDKDYFNLPASLSSARHFKGITKNKKAGEVEITVRLPASMRRLLMVGLAETAAEKTMVRSHRGIGGAFVVD--VITDGKSGVAVQLEGSSFETVWQLKEGGEDGILDLNKLTSNDVYAVGQTYGVEAARASIVAEITNVFGAYGIAVDPRHLGLVADHMTFNGGYRAMNRMGMSDFSSPCLQMSFETTAEFMTKAAVAGNSDKLKSPSARIVMGRVGDFGTGMFNLLQP 1731 +AFQ+L+WV Y+R + PGE VG +AAQS+GEPSTQMTLNTFHLAGHG ANVTLGIPRLREIIMTA+ + TP +PLR + A + RL++++LS L+++ G+ V+++ K + G LW R Y + L F K K+AFG+ V + FV LL++I+ +++++G +S A T P+G S ++ EQGTL+FG ++E YG MDEE++ I K+ M+ ++ D DE+ G D+K + +F D + +P S+ R+F +N+K VE+ +R P + LLMV L E A++ +V++ GI ++++ + + VQ G +F+ +W G D ILD+N+L++ND+Y V QTYGVEAARA+I +I VFG YGI+VDPRHL L+AD+MT GGY +NRMGM+ S Q++FET+ +F+++AA+ G D L+SPSAR+V+G+ GTG F+LLQP Sbjct: 1065 DAFQLLVWVNYLRSMCAPGENVGILAAQSIGEPSTQMTLNTFHLAGHGAANVTLGIPRLREIIMTASAKMSTPMMTIPLRDDVASSRAQEVEQRLNQVALSELINSVNGVRVKDQFHKSENGILWVRDYHIRLTFFKLKEIKRAFGLSADQVFSSVGKGFVGRLLTLISREMKKSGVAVSATAETNNLRG--PAG----------------------SSANSQXXXXXXXXXXXXXEQGTLRFGSRREVQGYGEMDEEDEKIRKSQMANQDSDXXXXXXXXXXXXXXXXXXXXXSDEAGG----VDKKSSKQKKTFT--TAVDGMESLEVPNSVRKNRYFVFCGRNQKENYVELRLRFPTHSKTLLMVPLVEKVAKQVLVQNCPGISRCYLINQRLGESQEEKPCVQTAGLNFQEIW-----GFDDILDVNQLSTNDIYQVLQTYGVEAARANISKQIMEVFGVYGISVDPRHLNLLADYMTAQGGYMPLNRMGMNYKGSSLQQITFETSMKFLSQAALGGLVDTLESPSARLVLGQPPRVGTGSFSLLQP 1580 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig8786.20412.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig8786.20412.1 >prot_M-pyrifera_M_contig8786.20412.1 ID=prot_M-pyrifera_M_contig8786.20412.1|Name=mRNA_M-pyrifera_M_contig8786.20412.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=577bp CVSEAFQSSLQAFLDSDPPSLKGVVSGQDAGGVAPGDGKYAPPVSLKEAFback to top mRNA from alignment at M-pyrifera_M_contig8786:1203..8501+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig8786.20412.1 ID=mRNA_M-pyrifera_M_contig8786.20412.1|Name=mRNA_M-pyrifera_M_contig8786.20412.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=7299bp|location=Sequence derived from alignment at M-pyrifera_M_contig8786:1203..8501+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig8786:1203..8501+ >mRNA_M-pyrifera_M_contig8786.20412.1 ID=mRNA_M-pyrifera_M_contig8786.20412.1|Name=mRNA_M-pyrifera_M_contig8786.20412.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=3462bp|location=Sequence derived from alignment at M-pyrifera_M_contig8786:1203..8501+ (Macrocystis pyrifera P11B4 male)back to top |