prot_M-pyrifera_M_contig8786.20412.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig8786.20412.1
Unique Nameprot_M-pyrifera_M_contig8786.20412.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length577
Homology
BLAST of mRNA_M-pyrifera_M_contig8786.20412.1 vs. uniprot
Match: D7FNY3_ECTSI (DNA-directed RNA polymerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNY3_ECTSI)

HSP 1 Score: 734 bits (1896), Expect = 1.050e-259
Identity = 407/582 (69.93%), Postives = 453/582 (77.84%), Query Frame = 0
Query:    1 CVSEAFQSSLQAFLDSDPPSLKGVVSGQDAGGVAPGDGKYAP-PVSLKEAFQVLMWVKYMRCLATPGETVGSIAAQSVGEPSTQMTLNTFHLAGHGGANVTLGIPRLREIIMTAAKSLKTPSTVVPLRKGASREAANSLALRLSRLSLSLLLHNKGGIVVRERLVKGDTGLWERHYAVCLRIFPSKLTKQAFGIDFKTVCRIISSLFVPNLLSVIAADLRRTGTRISEAAGTTTKVPSQ----PSGKGEEQEDGGTEDAGFARQALRDSMKKARKADADYESDDEDEEQGTLKFGKQKEQASYGGMDEEEKAIWKAMSGKEGDGFLDGDESDGGHDGYDQKGTDTAGSFVGDRNEDDKDYFNLPASLSSARHFKGITKNKKAGEVEITVRLPASMRRLLMVGLAETAAEKTMVRSHRGIGGAFVVDVITDGKSGVAVQLEGSSFETVWQLKEGGEDGILDLNKLTSNDVYAVGQTYGVEAARASIVAEITNVFGAYGIAVDPRHLGLVADHMTFNGGYRAMNRMGMSDFSSPCLQMSFETTAEFMTKAAVAGNSDKLKSPSARIVMGRVGDFGTGMFNLLQP 577
            CVSEAFQ SLQAFLDS+P SL+G  + +++  VA       P P SLKEAF++LMWVKYMRCLA PGETVGSIAAQSVGEPSTQMTLNTFHLAGHGGANVTLGIPRLREIIMTAAK+LKTPS VVPLR+GA R AA SLALRLSRL LS LL N+GGIVVRERLVKGDTGLWERHYA+CL++F   +   AF I FK +CR IS +FVPNLLS IA DLRRTG ++S+  G+T  + S+                                                EQGTLKFGKQKEQ+SYGGMDEEEKAIWKAMSGKE DG + GD+ D   +G    G D     VG   +DDKDYFNLP +LS ARHFKGITKNKK GEVE+TVRLP+SMRRLLMVGLAE+AA KTMVRSH+GI GAFVV+   DGKSG+AVQLEGS FETVWQLKEGG DGIL+LNKLTSND++AV QTYGVEAARASIVAEIT VFGAYGIAVDPRHLGLVADHMTF+GGYR +NR GM+DFSSPCLQMSFETT +FM KAAVA +SD+LKSPSARIVMGRVG+FGTGMF+L QP
Sbjct:   64 CVSEAFQKSLQAFLDSNPASLRGDHTKENSKAVAASGTSSPPGPGSLKEAFELLMWVKYMRCLANPGETVGSIAAQSVGEPSTQMTLNTFHLAGHGGANVTLGIPRLREIIMTAAKNLKTPSMVVPLREGADRPAAKSLALRLSRLPLSQLLDNRGGIVVRERLVKGDTGLWERHYAICLKLFSPSIISMAFDISFKELCRKISGVFVPNLLSAIANDLRRTGNKLSQTGGSTVGMASRGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEQGTLKFGKQKEQSSYGGMDEEEKAIWKAMSGKEADGGVLGDDGDDDEEGI---GGDDG---VGKEKDDDKDYFNLP-NLSGARHFKGITKNKKTGEVEVTVRLPSSMRRLLMVGLAESAAAKTMVRSHKGIRGAFVVETTVDGKSGLAVQLEGSDFETVWQLKEGGVDGILNLNKLTSNDIWAVCQTYGVEAARASIVAEITGVFGAYGIAVDPRHLGLVADHMTFDGGYRPLNRAGMADFSSPCLQMSFETTTDFMAKAAVARSSDRLKSPSARIVMGRVGNFGTGMFDLRQP 638          
BLAST of mRNA_M-pyrifera_M_contig8786.20412.1 vs. uniprot
Match: A0A6H5KJ16_9PHAE (DNA-directed RNA polymerase subunit n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJ16_9PHAE)

HSP 1 Score: 766 bits (1977), Expect = 1.710e-256
Identity = 420/581 (72.29%), Postives = 473/581 (81.41%), Query Frame = 0
Query:    1 CVSEAFQSSLQAFLDSDPPSLKGVVSGQDAGGVAPGDGKYAPPV--SLKEAFQVLMWVKYMRCLATPGETVGSIAAQSVGEPSTQMTLNTFHLAGHGGANVTLGIPRLREIIMTAAKSLKTPSTVVPLRKGASREAANSLALRLSRLSLSLLLHNKGGIVVRERLVKGDTGLWERHYAVCLRIFPSKLTKQAFGIDFKTVCRIISSLFVPNLLSVIAADLRRTGTRISEAAGTTTKVPSQPSGKGEE--QEDGGTEDAGFARQALRDSMKKARKADADYESDDEDEEQGTLKFGKQKEQASYGGMDEEEKAIWKAMSGKEGDGFLDGDESDGGHDGYDQKGTDTAGSFVGDRNEDDKDYFNLPASLSSARHFKGITKNKKAGEVEITVRLPASMRRLLMVGLAETAAEKTMVRSHRGIGGAFVVDVITDGKSGVAVQLEGSSFETVWQLKEGGEDGILDLNKLTSNDVYAVGQTYGVEAARASIVAEITNVFGAYGIAVDPRHLGLVADHMTFNGGYRAMNRMGMSDFSSPCLQMSFETTAEFMTKAAVAGNSDKLKSPSARIVMGRVGDFGTGMFNLLQP 577
            CVSEAFQ SLQAFLDS+P SL+G  +  D+       G+ + P   SLKEAF++LMWVKYMRCLA PGETVGSIAAQSVGEPSTQMTLNTFHLAGHGGANVTLGIPRLREIIMTAAK+LKTPS VVPLR+GA R  A SLA RLSRL LS LL N+GGIVVRERLVK +TGLWERHY VCLR+F   +   AF I FK +CR IS +FVPNLLS IA DLRRTG ++S+  G +  +P  P G+GE    E+   E    A        KKA KA+A+YESDDEDEEQGTLKFGKQKEQ+SYGGMDEEEKAIWKAMSGKE +G + G+E DG  DG D +G   A     D+N DD+DYFNLP ++S ARH KGITKNKK GEVE+TVRLP+SMRRLLMVGLAE+AA KTMVRSH+GI GAFVVD+  +GKSG+AVQLEGS FETVWQLKEGG DGIL+L+KLTSND++AV QTYGVEAARASIV+EIT VFGAYGIAVDPRHLGLVADHMTF+GGYR +NR GM+DFSSPCLQMSFETT +FM KAAVA +SD+LKSPSARIVMGRVG FGTGMF+L QP
Sbjct: 1293 CVSEAFQKSLQAFLDSNPASLRGDHT-NDSSKAGAATGRLSSPGVRSLKEAFELLMWVKYMRCLANPGETVGSIAAQSVGEPSTQMTLNTFHLAGHGGANVTLGIPRLREIIMTAAKNLKTPSMVVPLREGADRSTARSLARRLSRLPLSQLLDNRGGIVVRERLVKENTGLWERHYVVCLRLFRPSIISMAFDISFKELCRKISGVFVPNLLSAIANDLRRTGNKLSQTGGASVGLP--PRGRGERAGDEEDDLEGQISAIPQSNAGAKKASKAEAEYESDDEDEEQGTLKFGKQKEQSSYGGMDEEEKAIWKAMSGKEANGGVLGEE-DGDDDGNDDEGMGGADGVGNDKN-DDRDYFNLP-NISGARHLKGITKNKKTGEVEVTVRLPSSMRRLLMVGLAESAAAKTMVRSHKGIRGAFVVDMTVEGKSGLAVQLEGSDFETVWQLKEGGVDGILNLDKLTSNDIWAVCQTYGVEAARASIVSEITGVFGAYGIAVDPRHLGLVADHMTFDGGYRPLNRAGMADFSSPCLQMSFETTTDFMAKAAVARSSDRLKSPSARIVMGRVGSFGTGMFDLRQP 1867          
BLAST of mRNA_M-pyrifera_M_contig8786.20412.1 vs. uniprot
Match: A0A836C8M0_9STRA (DNA-directed RNA polymerase subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8M0_9STRA)

HSP 1 Score: 497 bits (1280), Expect = 2.590e-156
Identity = 288/580 (49.66%), Postives = 376/580 (64.83%), Query Frame = 0
Query:    2 VSEAFQSSLQAFLDSDPPSLKGVVSGQDAGGVAPGDGKYAPPVSLKEAFQVLMWVKYMRCLATPGETVGSIAAQSVGEPSTQMTLNTFHLAGHGGANVTLGIPRLREIIMTAAKSLKTPSTVVPLRKGASREAANSLALRLSRLSL-SLLLHNKGGIVVRERLVKGDTGLWERHYAVCLRIFPSKLTKQAFGIDFKTVCRIISSLFVPNLLSVIAADLRRTGTRISEAAGTTTKVPSQPSGKGEEQEDGGTEDAGFARQALRDSMKKARKADADYESDDEDEE-QGTLKFGKQKEQASYGGMDEEEKAIWKAMSGKEGDGFLDGDESDGGHDGYDQKGTDTAGSFVGDRNEDDKDYFNLPASLSSARHFKGITKNKKAGEVEITVRLPASMRRLLMVGLAETAAEKTMVRSHRGIGGAFVVDVITDGKSGVAVQLEGSSFETVWQL--KEGGEDGILDLNKLTSNDVYAVGQTYGVEAARASIVAEITNVFGAYGIAVDPRHLGLVADHMTFNGGYRAMNRMGMSDFSSPCLQMSFETTAEFMTKAAVAGNSDKLKSPSARIVMGRVGDFGTGMFNLLQP 577
            VSE F + L+AF+ ++    +G++SG+                + ++ F V+MWVKYMR LA PGE VG+IA QSVGEPSTQMTLNTFHLAGHGGANVTLGIPRLREI+MTA+++LKTP+  VPL +G SR    +LA  L+RL L  LLL+  GG+ VRE+L KGDTGLWERHY + LR+FP+K   +AF + FK +CR IS  FVP LL ++A +LRR G    E A   +K                       + A+  +             D  DEE QGTLKFG++KEQASYG MD++EK +WKAM GK GD     D+ D   D    +G        GD  +D  D+ +L   + + + F  +  NK +  V +T++ PAS+RRLLMVG+AE AA  ++VRSH  IG +F+V+ +  G++ +A+Q EG+ F T+W L  +EGG   +LDL +L SN +Y +  +YGVEA RA+I  EI  VF  YGI VD RHLGL+AD+MTF GGYRAMNR+GM D +SP LQMSFETTA F+ +AA+    +KLKSPSARIVMG+VGDFGTG F+L+ P
Sbjct: 1123 VSERFHARLEAFMAAES-HRRGLLSGRRG-------------AAARDDFTVMMWVKYMRSLAAPGEAVGAIAGQSVGEPSTQMTLNTFHLAGHGGANVTLGIPRLREIVMTASRALKTPAATVPLLRGVSRAQGEALARLLTRLPLLELLLNTGGGVTVREKLGKGDTGLWERHYVIALRLFPAKKILKAFSLTFKQLCRAISQTFVPRLLRLVATELRRCG----ELAAARSK-----------------------KSAVSKAKXXXXXXXXXXXXDSGDEEGQGTLKFGRKKEQASYGDMDDDEKEMWKAMKGKGGDPLNSDDDGDDASDDGRSRGDGQTTQLDGDE-QDGLDFLDLSTGVKNNQMFGRMDFNKASNTVTVTLKFPASVRRLLMVGIAEAAAATSVVRSHGKIGRSFLVEQLIGGENRMALQTEGADFATLWALGPREGGT--LLDLPQLASNHIYGMLMSYGVEACRAAITKEIAAVFAVYGIGVDARHLGLIADYMTFYGGYRAMNRIGMKDIASPFLQMSFETTASFLVQAALDSKVEKLKSPSARIVMGQVGDFGTGQFDLMVP 1658          
BLAST of mRNA_M-pyrifera_M_contig8786.20412.1 vs. uniprot
Match: W7TZA0_9STRA (DNA-directed RNA polymerase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TZA0_9STRA)

HSP 1 Score: 390 bits (1001), Expect = 1.210e-118
Identity = 256/604 (42.38%), Postives = 359/604 (59.44%), Query Frame = 0
Query:    2 VSEAFQSSLQAFLDSDPPSL--KGVVSGQDAGGVAPGDGKYAPPVSLKEAFQVLMWVKYMRCLATPGETVGSIAAQSVGEPSTQMTLNTFHLAGHGGANVTLGIPRLREIIMTAAKSLKTPSTVVPLRKGASREAANSLALRLSRLSL-SLLLHNKGGIVVRERLVK-GDTGL-WERHYAVCLRIFPSKLTKQAFGIDFKTVCRIISSLFVPNLLSVIAADLRRTGTR-----ISEAAGTTTKVPSQPSGKGEEQEDGGTEDAG--------FARQALRDSMKKARKADADYESDDE-------DEEQGTLKFGKQKEQASYGGMDEEEKAIWKAMSGKEGDGFLDGDESDGGHDGYDQKGTDTAGSFVGDRNEDDKDYFNLPASLSSARH--FKGITKNKKAGEVEITVRLPASMRRLLMVGLAETAAEKTMVRSHRGIGGAFVVDVITDGKSG-VAVQLEGSSFETVWQLKEGGEDGILDLNKLTSNDVYAVGQTYGVEAARASIVAEITNVFGAYGIAVDPRHLGLVADHMTFNGGYRAMNRMGMSDFSSPCLQMSFETTAEFMTKAAVAGNSDKLKSPSARIVMGRVGDFGTGMFNLLQP 577
            +SE FQ +++ +L  DP  L  K  + G  +                K   ++L+W+KYMR L +PGE VGSIA QS+GEPSTQMTLNTFHLAGHGGANVTLGIPRLREIIMTA+++ KTPS  V L    SR  A  L+ RL RL L  ++ H +G ++V+ERL +   +G+ W+R+Y V LR+   ++ ++AFG+  + +  +I++ FV  LL+ + A+LR+  +R     + E  G      ++ SG+  E E   T   G         AR   + S K A   D D E D         DE QGTL FG+++E+  Y   +EE+ +             + GD++ G  +G +  G     S V  +       F+  A+++   H  F+ +   ++ G   IT++  AS RRLLMV + E AAE+  V   +GI  AFVV+    GK G  ++Q EG +   +W++     D  LDLN +TSND++A+ QTYGVEAARA+IV EI  VFGAYGIAVDPRHLGLVAD MT+ GG+RA+NR+GMS+ SSP LQMSFETTA F+T+AA+    D L++PSA++VMG+    GTG F+++ P
Sbjct:  691 ISERFQDAIEDYLGRDPEHLFQKSEMGGSKS----------------KAGLELLLWLKYMRSLTSPGEAVGSIAGQSIGEPSTQMTLNTFHLAGHGGANVTLGIPRLREIIMTASRNPKTPSMTVSLCTSISRSEAQRLSARLRRLQLLEVVHHTQGSVLVKERLGRCASSGVTWQRYYTVSLRLHDEEVLQEAFGLSHEEMFEVIATRFVRQLLASVTAELRKVASRDVVRLLKERRGNAADAEARESGEASEDEADMTGLIGGRGPGMKAAARAGAKTSPKLAA-MDVDGEEDXXXXXXXXGDEAQGTLSFGRKEERGEYEPDEEEDPSE------------VVGDDASGIEEGVENSGEGQL-SEVPAKQRRSGSRFDDVAAVAKIDHPFFENLRFERETGVAHITLKTRASHRRLLMVSIVEAAAERCTVHVSKGIAQAFVVE----GKDGRCSIQTEGCNLSELWEVG----DAALDLNNITSNDIWAMHQTYGVEAARATIVKEIKGVFGAYGIAVDPRHLGLVADFMTYQGGFRALNRIGMSEVSSPFLQMSFETTATFLTEAALNSEKDDLQTPSAKLVMGQPTGNGTGSFDIMIP 1256          
BLAST of mRNA_M-pyrifera_M_contig8786.20412.1 vs. uniprot
Match: K8YRY5_NANGC (DNA-directed RNA polymerase subunit n=2 Tax=Monodopsidaceae TaxID=425072 RepID=K8YRY5_NANGC)

HSP 1 Score: 386 bits (991), Expect = 5.380e-115
Identity = 255/604 (42.22%), Postives = 356/604 (58.94%), Query Frame = 0
Query:    2 VSEAFQSSLQAFLDSDPPSL--KGVVSGQDAGGVAPGDGKYAPPVSLKEAFQVLMWVKYMRCLATPGETVGSIAAQSVGEPSTQMTLNTFHLAGHGGANVTLGIPRLREIIMTAAKSLKTPSTVVPLRKGASREAANSLALRLSRLSL-SLLLHNKGGIVVRERLVK-GDTGL-WERHYAVCLRIFPSKLTKQAFGIDFKTVCRIISSLFVPNLLSVIAADLRRTGTR-----ISEAAGTTTKVPSQPSGKGEEQEDGGTEDAG--------FARQALRDSMKKARKADADYESDDE-------DEEQGTLKFGKQKEQASYGGMDEEEKAIWKAMSGKEGDGFLDGDESDGGHDGYDQKGTDTAGSFVGDRNEDDKDYFNLPASLSSARH--FKGITKNKKAGEVEITVRLPASMRRLLMVGLAETAAEKTMVRSHRGIGGAFVVDVITDGKSG-VAVQLEGSSFETVWQLKEGGEDGILDLNKLTSNDVYAVGQTYGVEAARASIVAEITNVFGAYGIAVDPRHLGLVADHMTFNGGYRAMNRMGMSDFSSPCLQMSFETTAEFMTKAAVAGNSDKLKSPSARIVMGRVGDFGTGMFNLLQP 577
            +SE FQ +++ +L  DP  L  K  + G  +                K   ++L+W+KYMR L +PGE VGSIA QS+GEPSTQMTLNTFHLAGHGGANVTLGIPRLREIIMTA+++ KTPS  VPL    SR  A  L+ RL RL L  ++ H +GG++V+ERL +   +G+ W+R+Y V LR+   ++ ++AFG+  + +  +I++ FV  LL+ + A+LR+  +R     + E  G      ++ SG+  E E   T   G         AR   + S K A   D D E           DE QGTL FG+++E+  Y   + +E                +G E+ G          +   S V  +   +   F+  A+++   H  F+ +   ++ G   IT++  AS RRLLMV + E AAE+  VR  +GI  AFVV+    GK G  ++Q EG +   +W++     D  LDLN +TSND++A+ QTYGVEAARA+IV EI  VFGAYGIAVDPRHLGLVAD MT+ GG+RA+NR+GMS+ SSP LQMSFETTA F+T+AA+    D L++PSA++VMG+    GTG F+++ P
Sbjct: 1281 ISERFQDAIEDYLGRDPEHLFQKSEMGGSKS----------------KAGLELLLWLKYMRSLTSPGEAVGSIAGQSIGEPSTQMTLNTFHLAGHGGANVTLGIPRLREIIMTASRNPKTPSMTVPLCTSISRSEAQRLSARLRRLQLLEVVHHTQGGVLVKERLGRCASSGVTWQRYYTVSLRLHDEEVLQEAFGLSHEEMFEVIATRFVRQLLASVTAELRKVASRDVVRLLKERRGNAADAEARESGEASEDEADMTGLVGGRGPGMKAAARAGAKTSPKLAA-MDVDGEEXXXXXXXXXGDEAQGTLSFGRKEERGEY---EPDEXXXXXXXXXXXXXXIEEGVENSG----------EGQLSEVPAKQRRNGSRFDDVAAVAKIDHPFFENLRFERETGVAHITLKTRASHRRLLMVSIVEAAAERCTVRVSKGIAQAFVVE----GKDGRCSIQTEGCNLSELWEVG----DAALDLNNITSNDIWAMHQTYGVEAARATIVKEIKGVFGAYGIAVDPRHLGLVADFMTYQGGFRALNRIGMSEVSSPFLQMSFETTATFLTEAALNSEKDDLQTPSAKLVMGQPTGNGTGSFDIMIP 1846          
BLAST of mRNA_M-pyrifera_M_contig8786.20412.1 vs. uniprot
Match: K3X8S6_GLOUD (DNA-directed RNA polymerase subunit n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X8S6_GLOUD)

HSP 1 Score: 355 bits (912), Expect = 2.280e-104
Identity = 226/549 (41.17%), Postives = 314/549 (57.19%), Query Frame = 0
Query:   48 EAFQVLMWVKYMRCLATPGETVGSIAAQSVGEPSTQMTLNTFHLAGHGGANVTLGIPRLREIIMTAAKSLKTPSTVVPLRKGASREA-ANSLALRLSRLSLSLLLHNKGGIVVRERLVKGDTG-LWERHYAVCLRIFPSKLTKQAFGIDFKTVCRIISSLFVPNLLSVIAADLRRTGTRISEAAGTTTKVPSQPSGKGEEQEDGGTEDAGFARQALRDSMKKARKADADYESDDEDEEQGTLKFGKQKEQASYGGMDEEEKAIWKAMSGKE---------------GDGFLDGDESDGGHDGYDQKGTDTAGSFVGDRNEDDKDYFNLPASLSSARHFKGITKNKKAGEVEITVRLPASMRRLLMVGLAETAAEKTMVRSHRGIGGAFVVDV-ITDGKSGV-AVQLEGSSFETVWQLKEGGEDGILDLNKLTSNDVYAVGQTYGVEAARASIVAEITNVFGAYGIAVDPRHLGLVADHMTFNGGYRAMNRMGMSDFSSPCLQMSFETTAEFMTKAAVAGNSDKLKSPSARIVMGRVGDFGTGMFNLLQP 577
            +AFQ+L+WV Y+R +A PGE VG + AQS+GEPSTQMTLNTFHLAGHG ANVTLGIPRLREIIMTA++ + TP   +PL K    +A A  +  RL++++LS L+ N+ G+ V++  +K + G LW R Y + L +F  K  K+AFG+    V   I   F+  LLSV++ +++++G  +S +A  T                     AGF       S                  EQGTL+FG + E   YG MDEE+K I  A                      G   GDE D   D  +  G+    SFV D  E      N+P S+   ++F    +N K   VE  +R P   + LLMV + E  A++ +V+   GI   ++++  I D +     +Q EG +F+ +W       D ILD+N+L +ND+Y V QTYGVEAARASI  +I +VFG YGI+VDPRHL L+AD+MT  GGY  +NRMGM++  S   Q++FET+ +F+T+AA+ G SD L+SPSARI++G+    GTG F+LLQP
Sbjct: 1309 DAFQLLVWVNYLRSMANPGENVGVLCAQSIGEPSTQMTLNTFHLAGHGAANVTLGIPRLREIIMTASEKMSTPMMTIPLLKNDKAQARAQEVEQRLNQVALSELISNQRGVSVKDEFLKSENGILWVRDYTIRLTLFKLKYIKKAFGLTSDDVYNAIGKGFIQKLLSVLSREMKKSG--VSVSAIETNNF------------------AGFG------SSXXXXXXXXXXXXXXXXXEQGTLRFGSRGEVNGYGEMDEEDKKIQNAQDSXXXXXXXXXXXXXXXXTAGGNTSGDEGDA-MDSSNMSGSKKTKSFVADGLES----LNVPISVRKNKYFMYAGRNTKEHFVEFRLRFPTHSKTLLMVPIVERVAKQVLVQHCPGISRCYLINQRIGDAQEETPCIQTEGLNFQEIWSF-----DDILDVNQLATNDIYQVLQTYGVEAARASISKQINDVFGVYGISVDPRHLSLLADYMTAQGGYMPLNRMGMNNKGSSMQQITFETSMKFLTQAALGGLSDNLESPSARIILGQPPRVGTGSFSLLQP 1821          
BLAST of mRNA_M-pyrifera_M_contig8786.20412.1 vs. uniprot
Match: A0A7S3HIX0_9STRA (DNA-directed RNA polymerase n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HIX0_9STRA)

HSP 1 Score: 336 bits (862), Expect = 1.640e-103
Identity = 246/608 (40.46%), Postives = 323/608 (53.12%), Query Frame = 0
Query:    2 VSEAFQSSLQAFLDSDPPSLKGVVSGQDAGGVAPGDGKYAPPVSLKEAFQVLMWVKYMRCLATPGETVGSIAAQSVGEPSTQMTLNTFHLAGHGGANVTLGIPRLREIIMTAAKSLKTPSTVVPLRKGASREAANSLALRLSRLSLSLLLHNKGGIVVRERLVKGDTGL-WERHYAVCLRIFPSKLTKQAFGIDFKTVCRIISSLFVPNLLSVIAADLRRTGTRISEAAGTTTKVPSQPSGKGEEQEDG------------GTEDAGFARQAL---RDSMKKARKADADYESDDEDEEQ--------GTLKF--GKQKEQASYGGMDEEEKAIWKAMSGKEGDGFLD-GDESDGGHDGYDQKGTDTAGSFVGDRNEDDKDYFNLPASLSSARHFKGITK-----NKKAGEVEITVRLPASMRRLLMVGLAETAAEKTMVRSHRGIGGAFVVDVITDGKSGVAVQLEGSSFETVWQLKEGGEDGILDLNKLTSNDVYAVGQTYGVEAARASIVAEITNVFGAYGIAVDPRHLGLVADHMTFNGGYRAMNRMGMSDFSSPCLQMSFETTAEFMTKAAVAGNSDKLKSPSARIVMGRVGDFGTGMFNLLQP 577
            VSEA Q  ++ ++  +P    GV++   A     GD           + ++L+WVKY+R +A PGE VG +AAQSVGEPSTQMTLNTFHLAGHGGANVTLGIPRLREIIMTA+++LKTP+   P+       AA +LA +LSRL LS LL ++GGIVV E++ +   G  WER Y + L    ++  +  FG  F TV      +F   L  +I  + RR G   +       K    P G+G+    G            G + A          R + KK  KA  D ESDD D E         G LK   G +KEQ  Y   +E      + + GK  DG  D   E                                  AS + A       +     N++ G  E+ +   A  RRLLM  L+E AA  TMVRS + I  A+ VD   +G++  AV  EG +FE +W ++E    G++ +N++ SND++ +  TYGVEAAR SIVAEI NVFG YGI VDPRHL L+AD MT NG +  +NR GM+   SP L+MSFE+T  F+TKAA  G SD L+SPSARIV+G     GTG F+L+ P
Sbjct:   98 VSEALQQKVRDYVKKNPD---GVITDVGADTTVTGD-----------SLELLVWVKYLRSMACPGEAVGCVAAQSVGEPSTQMTLNTFHLAGHGGANVTLGIPRLREIIMTASRNLKTPTMYAPMCVPRDNIAAKALARKLSRLPLSQLLSHQGGIVVGEQIRRATAGSRWERIYRIRLNFEKAERIQAVFGCSFDTVVGAFKGIFTAKLDRLIKLEQRRAGDSTAGGMNEILKSMKGP-GEGKSATGGXXXXXXXXXRRRGGKSASXXXXXXGTGRGNSKKGAKAAEDSESDDSDXEADQENNDDLGNLKLSGGTRKEQ-DYENDEESADEAGEDIDGKGPDGTTDESSEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAASKAGANLLSAFRRDTFNYNEEEGWAEVELSFHARARRLLMAQLSEQAAAATMVRSTKSITNAYAVD--EEGQA--AVVTEGVNFEALWAMRE----GLIKVNEIKSNDIWQLLCTYGVEAARHSIVAEIKNVFGVYGINVDPRHLSLIADFMTRNGSFTPLNRAGMNSCPSPFLRMSFESTCTFLTKAAQEGQSDNLQSPSARIVLGTTAKVGTGCFDLMLP 681          
BLAST of mRNA_M-pyrifera_M_contig8786.20412.1 vs. uniprot
Match: A0A5D6XPF2_9STRA (DNA-directed RNA polymerase subunit n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XPF2_9STRA)

HSP 1 Score: 345 bits (884), Expect = 1.350e-100
Identity = 219/548 (39.96%), Postives = 313/548 (57.12%), Query Frame = 0
Query:   48 EAFQVLMWVKYMRCLATPGETVGSIAAQSVGEPSTQMTLNTFHLAGHGGANVTLGIPRLREIIMTAAKSLKTPSTVVPLRKGASREAANSLALRLSRLSLSLLLHNKGGIVVRERLVKGDTG-LWERHYAVCLRIFPSKLTKQAFGIDFKTVCRIISSLFVPNLLSVIAADLRRTGTRISEAAGTTTKVPSQPSGKGEEQEDGGTEDAGFARQALRDSMKKARKADADYESDDEDEEQGTLKFGKQKEQASYGGMDEEEK---------------AIWKAMSGKEGDGFLDGDESDGGHDGYDQKGTDTAGSFVGDRNEDDKDYFNLPASLSSARHFKGITKNKKAGEVEITVRLPASMRRLLMVGLAETAAEKTMVRSHRGIGGAFVVDV-ITDGKSGV-AVQLEGSSFETVWQLKEGGEDGILDLNKLTSNDVYAVGQTYGVEAARASIVAEITNVFGAYGIAVDPRHLGLVADHMTFNGGYRAMNRMGMSDFSSPCLQMSFETTAEFMTKAAVAGNSDKLKSPSARIVMGRVGDFGTGMFNLLQP 577
            +AFQ+L+WV Y+R +A PGE VG IAAQS+GEPSTQMTLNTFHLAGHG ANVTLGIPRLREIIMTA++ + TP   +PL        A+ +  RL++++L+ LL N+ G+ VR+  V  + G LW R Y + L +F  K  K+AFG+    V   +   F+  LLS I+ +++++G  ++ AA  T        G           +AG                          +EQGTL+FG ++E   Y   DE+E+               A  K   G +       DE   G  G   K +  A +  G       +  ++P S+   ++F    +N KA  VE+ +R P   + +LMV L E  A++ +V+   GI   ++++  + D +     VQ EG +F+ +W       D ILD+N+L +ND++ V QTYGVEAARASI  +I +VFG YGI+VDPRHL L+AD+MT  GGY  +NRMGM++  S   Q++FET+ +F+T+AA+AGNSD L+SPSARI++G+    GTG F+LLQP
Sbjct: 1322 DAFQLLVWVNYLRSMANPGENVGVIAAQSIGEPSTQMTLNTFHLAGHGAANVTLGIPRLREIIMTASEKMSTPMMTIPLLAHVPAARAHEVEQRLNQVALAELLSNERGVAVRDEFVPSENGILWVRDYTIRLTLFKLKQIKRAFGLSADDVFGAVGKNFIGKLLSFISREMKKSGVSVAAAAEATNNFAGSTRGT----------NAGXXXXXXXXXXX---------------DEQGTLRFGSRREVQGYEMDDEDEQLRQAQDDSDXXXXXXARSKKARGAKRASVGPADEEATGS-GAKSKKSGMATALAGGL-----EALDVPMSVRKNKYFVYCGRNTKAHYVELRLRFPTHSKTVLMVPLVERVAKQVLVQHCPGISRCYLINQRLGDAQDETPCVQTEGLNFQEIWAF-----DDILDVNQLATNDIFQVLQTYGVEAARASISKQINDVFGVYGISVDPRHLSLLADYMTAYGGYMPLNRMGMNNKGSALQQITFETSMKFLTQAALAGNSDNLESPSARIILGQPPRVGTGSFSLLQP 1833          
BLAST of mRNA_M-pyrifera_M_contig8786.20412.1 vs. uniprot
Match: A0A1V9ZEK2_9STRA (DNA-directed RNA polymerase subunit n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZEK2_9STRA)

HSP 1 Score: 343 bits (880), Expect = 4.010e-100
Identity = 225/592 (38.01%), Postives = 332/592 (56.08%), Query Frame = 0
Query:    1 CVSEAFQSSLQAFLDSDPPSLKGVVSGQDAGGVAPGDGKYAPPVSLKEAFQVLMWVKYMRCLATPGETVGSIAAQSVGEPSTQMTLNTFHLAGHGGANVTLGIPRLREIIMTAAKSLKTPSTVVPLRKGASREAANSLALRLSRLSLSLLLHNKGGIVVRERLVKGDTG-LWERHYAVCLRIFPSKLTKQAFGIDFKTVCRIISSLFVPNLLSVIAADLRRTGTRISEAAGTTTKVPSQPSGKGEEQEDGGTEDAGFARQALRDSMKKARKADADYESDDEDEEQGTLKFGKQKEQASYGGMDEEEKAIWKAMSGKEGDGFLDGDESDGGHDGYDQKGTDTAGSFVGDRNEDDKDY------------FNLPASLSSARHFKGITKNKKAGEVEITVRLPASMRRLLMVGLAETAAEKTMVRSHRGIGGAFVVDVITD--GKSGVAVQLEGSSFETVWQLKEGGEDGILDLNKLTSNDVYAVGQTYGVEAARASIVAEITNVFGAYGIAVDPRHLGLVADHMTFNGGYRAMNRMGMSDFSSPCLQMSFETTAEFMTKAAVAGNSDKLKSPSARIVMGRVGDFGTGMFNLLQP 577
            CVSE  Q  ++ +  ++P +L      +  G V+              AF++++WVKYMR L  PGE VG+I AQS+GEPSTQMTLNTFHLAGHG ANVTLGIPRLREIIMTA+K + TP   +P+   A+   A ++  +L+++ L+ L+ N  GI V+++ ++ +   LW R Y + L  F  KL ++AFGI  K + R     FV  LL+++  ++R++G ++S   G+ + V S+ + + E+ E                  ++A+           D  QGTLKFG QKE A YG MD+++  I KA +  +     D DES        +K     GS   + + DD+D              N+  +++   +F G   N      E+ +R PA+ + LL+V L E  A + +VRS  GI   + V    D  GK    +Q +G +FE +W+L     D +LD+N+L +ND+Y V   YGVEAARASI  +I +VFG YGI+VDPRHL L+AD+MT  G Y  +NR GM+   S   Q++FET+ +F+T+AA     D +  PSAR+V+G+    GTG+F+L+ P
Sbjct: 1211 CVSEKTQQHIETYSKANPSNLLESKKNKIGGVVS------------SSAFRLMVWVKYMRSLCQPGENVGTICAQSIGEPSTQMTLNTFHLAGHGAANVTLGIPRLREIIMTASKKMSTPMMTIPVLPTATPAQAVAVEQKLNQVPLAELIRNTKGIRVQDQFLESENRVLWCREYTIRLYFFKPKLIREAFGITTKEIQRAFGKSFVSRLLTLLKHEMRKSGVQVSVENGSMS-VRSKDNIEEEDAE----------------PTRRAKXXXXXXXXXXXD--QGTLKFGSQKEAAGYGEMDDDDVEIQKAQNTDD----QDMDESA-------EKSKQADGSDT-ENSSDDEDVAPIKVIKGELKPVNVTDTVNKNPYFAGAGVNTTEHYGELKLRFPANFKTLLLVPLIEKIASQVLVRSCDGISRCYTVKQRLDKSGKEEQCIQTQGLNFEAIWEL-----DHVLDVNRLVTNDIYQVLLNYGVEAARASISKQIQDVFGVYGISVDPRHLSLLADYMTHYGDYMPLNRSGMARKGSSFQQITFETSMKFLTQAATGNFGDNMSGPSARLVLGQPVKLGTGLFSLMTP 1754          
BLAST of mRNA_M-pyrifera_M_contig8786.20412.1 vs. uniprot
Match: A0A662Y848_9STRA (DNA-directed RNA polymerase (Fragment) n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662Y848_9STRA)

HSP 1 Score: 340 bits (871), Expect = 3.700e-99
Identity = 215/551 (39.02%), Postives = 316/551 (57.35%), Query Frame = 0
Query:   48 EAFQVLMWVKYMRCLATPGETVGSIAAQSVGEPSTQMTLNTFHLAGHGGANVTLGIPRLREIIMTAAKSLKTPSTVVPLRKGASREAANSLALRLSRLSLSLLLHNKGGIVVRERLVKGDTG-LWERHYAVCLRIFPSKLTKQAFGIDFKTVCRIISSLFVPNLLSVIAADLRRTGTRISEAAGTTTKVPSQPSGKGEEQEDGGTEDAGFARQALRDSMKKARKADADYESDDEDEEQGTLKFGKQKEQASYGGMDEEEKAIWKA-MSGKEGDGFLD-----------------GDESDGGHDGYDQKGTDTAGSFVGDRNEDDKDYFNLPASLSSARHFKGITKNKKAGEVEITVRLPASMRRLLMVGLAETAAEKTMVRSHRGIGGAFVVD--VITDGKSGVAVQLEGSSFETVWQLKEGGEDGILDLNKLTSNDVYAVGQTYGVEAARASIVAEITNVFGAYGIAVDPRHLGLVADHMTFNGGYRAMNRMGMSDFSSPCLQMSFETTAEFMTKAAVAGNSDKLKSPSARIVMGRVGDFGTGMFNLLQP 577
            +AFQ+L+WV Y+R +  PGE VG +AAQS+GEPSTQMTLNTFHLAGHG ANVTLGIPRLREIIMTA+  + TP   +PLR   +   A  +  RL++++LS L+++  G+ V+++  K + G LW R Y + L  F  K  K+AFG+    V   +   FV  LL++I+ +++++G  +S  A T       P+G                      S   ++             EQGTL+FG ++E   YG MDEE++ I K+ M+ ++ D                      DE+ G     D+K +    +F      D  +   +P S+   R+F    +N+K   VE+ +R P   + LLMV L E  A++ +V++  GI   ++++  +    +    VQ  G +F+ +W     G D ILD+N+L++ND+Y V QTYGVEAARA+I  +I  VFG YGI+VDPRHL L+AD+MT  GGY  +NRMGM+   S   Q++FET+ +F+++AA+ G  D L+SPSAR+V+G+    GTG F+LLQP
Sbjct: 1065 DAFQLLVWVNYLRSMCAPGENVGILAAQSIGEPSTQMTLNTFHLAGHGAANVTLGIPRLREIIMTASAKMSTPMMTIPLRDDVASSRAQEVEQRLNQVALSELINSVNGVRVKDQFHKSENGILWVRDYHIRLTFFKLKEIKRAFGLSADQVFSSVGKGFVGRLLTLISREMKKSGVAVSATAETNNLRG--PAG----------------------SSANSQXXXXXXXXXXXXXEQGTLRFGSRREVQGYGEMDEEDEKIRKSQMANQDSDXXXXXXXXXXXXXXXXXXXXXSDEAGG----VDKKSSKQKKTFT--TAVDGMESLEVPNSVRKNRYFVFCGRNQKENYVELRLRFPTHSKTLLMVPLVEKVAKQVLVQNCPGISRCYLINQRLGESQEEKPCVQTAGLNFQEIW-----GFDDILDVNQLSTNDIYQVLQTYGVEAARANISKQIMEVFGVYGISVDPRHLNLLADYMTAQGGYMPLNRMGMNYKGSSLQQITFETSMKFLSQAALGGLVDTLESPSARLVLGQPPRVGTGSFSLLQP 1580          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig8786.20412.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FNY3_ECTSI1.050e-25969.93DNA-directed RNA polymerase n=1 Tax=Ectocarpus sil... [more]
A0A6H5KJ16_9PHAE1.710e-25672.29DNA-directed RNA polymerase subunit n=1 Tax=Ectoca... [more]
A0A836C8M0_9STRA2.590e-15649.66DNA-directed RNA polymerase subunit n=1 Tax=Tribon... [more]
W7TZA0_9STRA1.210e-11842.38DNA-directed RNA polymerase n=1 Tax=Nannochloropsi... [more]
K8YRY5_NANGC5.380e-11542.22DNA-directed RNA polymerase subunit n=2 Tax=Monodo... [more]
K3X8S6_GLOUD2.280e-10441.17DNA-directed RNA polymerase subunit n=1 Tax=Globis... [more]
A0A7S3HIX0_9STRA1.640e-10340.46DNA-directed RNA polymerase n=1 Tax=Spumella elong... [more]
A0A5D6XPF2_9STRA1.350e-10039.96DNA-directed RNA polymerase subunit n=1 Tax=Pythiu... [more]
A0A1V9ZEK2_9STRA4.010e-10038.01DNA-directed RNA polymerase subunit n=1 Tax=Thraus... [more]
A0A662Y848_9STRA3.700e-9939.02DNA-directed RNA polymerase (Fragment) n=2 Tax=Not... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.70.2850coord: 155..318
e-value: 1.9E-13
score: 52.6
NoneNo IPR availableGENE3D1.10.150.390coord: 529..572
e-value: 1.9E-6
score: 29.5
NoneNo IPR availablePANTHERPTHR19376DNA-DIRECTED RNA POLYMERASEcoord: 2..576
NoneNo IPR availableSUPERFAMILY64484beta and beta-prime subunits of DNA dependent RNA-polymerasecoord: 53..576
IPR007081RNA polymerase Rpb1, domain 5PFAMPF04998RNA_pol_Rpb1_5coord: 46..525
e-value: 3.1E-48
score: 164.6
IPR015699DNA-directed RNA pol I, largest subunitPANTHERPTHR19376:SF11DNA-DIRECTED RNA POLYMERASE I SUBUNIT RPA1coord: 2..576

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig8786contigM-pyrifera_M_contig8786:1203..8501 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig8786.20412.1mRNA_M-pyrifera_M_contig8786.20412.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig8786 1203..8501 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig8786.20412.1 ID=prot_M-pyrifera_M_contig8786.20412.1|Name=mRNA_M-pyrifera_M_contig8786.20412.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=577bp
CVSEAFQSSLQAFLDSDPPSLKGVVSGQDAGGVAPGDGKYAPPVSLKEAF
QVLMWVKYMRCLATPGETVGSIAAQSVGEPSTQMTLNTFHLAGHGGANVT
LGIPRLREIIMTAAKSLKTPSTVVPLRKGASREAANSLALRLSRLSLSLL
LHNKGGIVVRERLVKGDTGLWERHYAVCLRIFPSKLTKQAFGIDFKTVCR
IISSLFVPNLLSVIAADLRRTGTRISEAAGTTTKVPSQPSGKGEEQEDGG
TEDAGFARQALRDSMKKARKADADYESDDEDEEQGTLKFGKQKEQASYGG
MDEEEKAIWKAMSGKEGDGFLDGDESDGGHDGYDQKGTDTAGSFVGDRNE
DDKDYFNLPASLSSARHFKGITKNKKAGEVEITVRLPASMRRLLMVGLAE
TAAEKTMVRSHRGIGGAFVVDVITDGKSGVAVQLEGSSFETVWQLKEGGE
DGILDLNKLTSNDVYAVGQTYGVEAARASIVAEITNVFGAYGIAVDPRHL
GLVADHMTFNGGYRAMNRMGMSDFSSPCLQMSFETTAEFMTKAAVAGNSD
KLKSPSARIVMGRVGDFGTGMFNLLQP
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007081RNA_pol_Rpb1_5
IPR015699DNA-dir_RNA_pol1_lsu