mRNA_M-pyrifera_M_contig87806.20399.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig87806.20399.1
Unique NamemRNA_M-pyrifera_M_contig87806.20399.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig87806.20399.1 vs. uniprot
Match: A0A7V8V2B5_9BACT (Xylose operon regulatory protein n=1 Tax=Bremerella alba TaxID=980252 RepID=A0A7V8V2B5_9BACT)

HSP 1 Score: 532 bits (1371), Expect = 7.860e-189
Identity = 273/274 (99.64%), Postives = 273/274 (99.64%), Query Frame = 1
Query:    1 VPKVVSDEVACGQMAAEFYLKRGWHFFGFVGPPPQLNYSDKVEKAFASTVGEAGRTVKRFNHEPNSGTITIGQEHPQMAEWLMALPKPVALLVWTTAIGQEIALLCRQIGISVPDDVAILAVELDPLVSAMSPVPIAYIDQSPRRVGAQAAALLERMIQGAPAPDEPVLVPPRGIAERMSVDNLFVEDEIVRQAMDFIRERMAEAIQVTDVASHVALSRRVLENRFEKALRRSPAQVIRRTKLTHAMYLLSETDLTVQEIGFQTGFFHQETFLR 822
            VPKVVSDEVACGQMAAEFYLKRGWHFFGFVGPPPQLNYSDKVEKAFASTVGEAGRTVKRFNHEPNSGTITIGQEHPQMAEWLMALPKPVALLVWTTAIGQEIALLCRQIGISVPDDVAILAVELDPLVSAMSPVPIAYIDQSPRRVGAQAAALLERMIQGAPAP EPVLVPPRGIAERMSVDNLFVEDEIVRQAMDFIRERMAEAIQVTDVASHVALSRRVLENRFEKALRRSPAQVIRRTKLTHAMYLLSETDLTVQEIGFQTGFFHQETFLR
Sbjct:  114 VPKVVSDEVACGQMAAEFYLKRGWHFFGFVGPPPQLNYSDKVEKAFASTVGEAGRTVKRFNHEPNSGTITIGQEHPQMAEWLMALPKPVALLVWTTAIGQEIALLCRQIGISVPDDVAILAVELDPLVSAMSPVPIAYIDQSPRRVGAQAAALLERMIQGAPAPVEPVLVPPRGIAERMSVDNLFVEDEIVRQAMDFIRERMAEAIQVTDVASHVALSRRVLENRFEKALRRSPAQVIRRTKLTHAMYLLSETDLTVQEIGFQTGFFHQETFLR 387          
BLAST of mRNA_M-pyrifera_M_contig87806.20399.1 vs. uniprot
Match: UPI001CCA0D61 (XylR family transcriptional regulator n=1 Tax=Bremerella volcania TaxID=2527984 RepID=UPI001CCA0D61)

HSP 1 Score: 484 bits (1245), Expect = 1.020e-169
Identity = 240/274 (87.59%), Postives = 264/274 (96.35%), Query Frame = 1
Query:    1 VPKVVSDEVACGQMAAEFYLKRGWHFFGFVGPPPQLNYSDKVEKAFASTVGEAGRTVKRFNHEPNSGTITIGQEHPQMAEWLMALPKPVALLVWTTAIGQEIALLCRQIGISVPDDVAILAVELDPLVSAMSPVPIAYIDQSPRRVGAQAAALLERMIQGAPAPDEPVLVPPRGIAERMSVDNLFVEDEIVRQAMDFIRERMAEAIQVTDVASHVALSRRVLENRFEKALRRSPAQVIRRTKLTHAMYLLSETDLTVQEIGFQTGFFHQETFLR 822
            +PKVVSDEVACGQMAAEFYLKRGWHFFGFVGPPP++NYSD+VEKAF S V +AGR V+RF+H PN+ TITIGQEHP+MAEWLM+LPKPVALLVWTTAIGQEIALLCRQ+GI+VPDDVAILAVELDPL+SAMSPVPIAYIDQSPRRVG+QAAALLERMIQG PAP++P+LVPPR IAERMSVDNLFVEDE+VRQAM+FIRE++AE IQVTDVA++VA+SRRVLENRFEKALRRSPAQVIRRTKL HAMYLLSETDLTVQEIGFQTGFFHQETFLR
Sbjct:  110 IPKVVSDEVACGQMAAEFYLKRGWHFFGFVGPPPRMNYSDQVEKAFVSAVTDAGRAVQRFDHAPNAETITIGQEHPKMAEWLMSLPKPVALLVWTTAIGQEIALLCRQLGIAVPDDVAILAVELDPLISAMSPVPIAYIDQSPRRVGSQAAALLERMIQGEPAPEQPILVPPRRIAERMSVDNLFVEDEVVRQAMNFIREKIAEPIQVTDVAANVAVSRRVLENRFEKALRRSPAQVIRRTKLAHAMYLLSETDLTVQEIGFQTGFFHQETFLR 383          
BLAST of mRNA_M-pyrifera_M_contig87806.20399.1 vs. uniprot
Match: A0A3D3RC96_9PLAN (HTH araC/xylS-type domain-containing protein n=2 Tax=Gimesia maris TaxID=122 RepID=A0A3D3RC96_9PLAN)

HSP 1 Score: 326 bits (836), Expect = 1.000e-107
Identity = 158/274 (57.66%), Postives = 210/274 (76.64%), Query Frame = 1
Query:    1 VPKVVSDEVACGQMAAEFYLKRGWHFFGFVGPPPQLNYSDKVEKAFASTVGEAGRTVKRFNHEPNSGTITIGQEHPQMAEWLMALPKPVALLVWTTAIGQEIALLCRQIGISVPDDVAILAVELDPLVSAMSPVPIAYIDQSPRRVGAQAAALLERMIQGAPAPDEPVLVPPRGIAERMSVDNLFVEDEIVRQAMDFIRERMAEAIQVTDVASHVALSRRVLENRFEKALRRSPAQVIRRTKLTHAMYLLSETDLTVQEIGFQTGFFHQETFLR 822
            +P V+SDE ACG++AA+++++ GW  FGFVGPPP   Y+D  +K+++  +   G    +F H    G ++   + P+M +WL++LPKP+AL VWTT +GQEI L CR +G+SVP+DVAILAVELDPLVS++SPVPIAYIDQSP RVG +AA LL++MIQG PAP++ VL+PP GI  R SVD L  EDE VR A++FIR+++A  +QV DVA+ V+LSRR LENRF+K L +SPAQ+IR +KL+ AM LL ET+LT+QEI  +TGFFH ETF R
Sbjct:   93 IPNVISDEAACGRLAADYFIQNGWTNFGFVGPPPNQKYTDVTQKSYSQLLAAGGYHTYQFEHSLGYGKLSFEDQRPEMEKWLLSLPKPIALFVWTTTMGQEIMLFCRHLGLSVPNDVAILAVELDPLVSSLSPVPIAYIDQSPHRVGMEAAKLLQKMIQGEPAPEKSVLIPPSGIVARQSVDTLLGEDEHVRNAIEFIRKKIALPMQVEDVANAVSLSRRSLENRFQKTLGKSPAQMIRESKLSRAMNLLMETNLTIQEIAERTGFFHVETFAR 366          
BLAST of mRNA_M-pyrifera_M_contig87806.20399.1 vs. uniprot
Match: UPI001CCF2FE1 (substrate-binding domain-containing protein n=1 Tax=Bremerella volcania TaxID=2527984 RepID=UPI001CCF2FE1)

HSP 1 Score: 305 bits (780), Expect = 1.160e-99
Identity = 155/274 (56.57%), Postives = 196/274 (71.53%), Query Frame = 1
Query:    1 VPKVVSDEVACGQMAAEFYLKRGWHFFGFVGPPPQLNYSDKVEKAFASTVGEAGRTVKRFNHEPNSGTITIGQEHPQMAEWLMALPKPVALLVWTTAIGQEIALLCRQIGISVPDDVAILAVELDPLVSAMSPVPIAYIDQSPRRVGAQAAALLERMIQGAPAPDEPVLVPPRGIAERMSVDNLFVEDEIVRQAMDFIRERMAEAIQVTDVASHVALSRRVLENRFEKALRRSPAQVIRRTKLTHAMYLLSETDLTVQEIGFQTGFFHQETFLR 822
            +PKVVSDEVACG MAA+F+L  GW  FG +G PP L+YSD+VE AF   + +AG  V+ F   P +  + +G  +  M  WL  +PKP A+LVWTT IG EI  +C ++ +SVPDDVAILAVE+DPL+S+++P PIAY+DQSPRRVG+ A  LL  +I G  AP+ P+L+PPR IAE  SVD  F ED +VR A+ FIRE     IQV+DVAS VA SRRVLE RFEK L+RSPA +IR T+L  A +LLSE+ L++ EI   TGF HQ+TF R
Sbjct:   72 IPKVVSDEVACGHMAADFFLSNGWANFGLIGSPPSLDYSDRVEGAFKERIEQAGMRVETFAQPPENRLLDLGDRYSDMIVWLNEIPKPAAILVWTTLIGHEIMKICNRMKLSVPDDVAILAVEVDPLISSLAPSPIAYVDQSPRRVGSVALNLLLDLIAGKEAPENPLLIPPRRIAELASVDTTFAEDPLVRDAVKFIREMSDRPIQVSDVASAVATSRRVLEQRFEKTLQRSPADMIRSTRLARAKHLLSESSLSINEISQITGFMHQKTFHR 345          
BLAST of mRNA_M-pyrifera_M_contig87806.20399.1 vs. uniprot
Match: UPI001487951E (DNA-binding transcriptional regulator n=1 Tax=Alienimonas chondri TaxID=2681879 RepID=UPI001487951E)

HSP 1 Score: 281 bits (720), Expect = 5.740e-90
Identity = 154/290 (53.10%), Postives = 193/290 (66.55%), Query Frame = 1
Query:    4 PKVVSDEVACGQMAAEFYLKRGWHFFGFVGPPPQLNYSDKVEKAFASTVG-----EAGRTVKRFNHEPNSGTITIGQEHPQMAEWLMALPKPVALLVWTTAIGQEIALLCRQIGIS------------VPDDVAILAVELDPLVSAMSPVPIAYIDQSPRRVGAQAAALLERMIQGAPAPDEPVLVPPRGIAERMSVDNLFVEDEIVRQAMDFIRERMAEAIQVTDVASHVALSRRVLENRFEKALRRSPAQVIRRTKLTHAMYLLSETDLTVQEIGFQTGFFHQETFLR 822
            P+V SDEVACG+MAAEFYL RG+  FGFVGPPP  +Y+D VE+ F   +G       GRT+  F H P S  + +G E  +  +WL  LPKPVALLVWTT I  EI  LCR   +             VPD VA+LAVE DPL+SA+SP+P+AYIDQSPR+VG +AA LLE M+ GAP P+ P+L+PPR +AER+SVD +  +D  VR+A+ +IR  + + I     A  V LSR  LE RF++AL  SPA+ IRRTKL+ A +LL ET LTV EI  +TGF H ETF R
Sbjct:  105 PQVASDEVACGRMAAEFYLSRGFTRFGFVGPPPGQDYTDAVERGFRVGLGLDDGTGGGRTLAVFPHPPASDRLHLGAERDRFLDWLSELPKPVALLVWTTNIAHEIVCLCRDAALRGGRGTTAAADLRVPDRVAVLAVEFDPLLSALSPIPLAYIDQSPRQVGRRAAELLEAMMLGAPPPETPILIPPRRVAERLSVDAMLEDDPEVRRAIAWIRAHVGQPIDAAAAARAVGLSRATLERRFKQALGSSPAREIRRTKLSLARHLLGETALTVAEIADRTGFLHTETFAR 394          
BLAST of mRNA_M-pyrifera_M_contig87806.20399.1 vs. uniprot
Match: A0A517LZT5_9BACT (Xylose operon regulatory protein n=1 Tax=Rosistilla ulvae TaxID=1930277 RepID=A0A517LZT5_9BACT)

HSP 1 Score: 264 bits (675), Expect = 1.660e-83
Identity = 133/274 (48.54%), Postives = 186/274 (67.88%), Query Frame = 1
Query:    1 VPKVVSDEVACGQMAAEFYLKRGWHFFGFVGPPPQLNYSDKVEKAFASTVGEAGRTVKRFNHEPNSGTITIGQEHPQMAEWLMALPKPVALLVWTTAIGQEIALLCRQIGISVPDDVAILAVELDPLVSAMSPVPIAYIDQSPRRVGAQAAALLERMIQGAPAPDEPVLVPPRGIAERMSVDNLFVEDEIVRQAMDFIRERMAEAIQVTDVASHVALSRRVLENRFEKALRRSPAQVIRRTKLTHAMYLLSETDLTVQEIGFQTGFFHQETFLR 822
            V  VVSDE A G++AAE+++ RGW  F ++G P  + Y D+    +  T+  AG T  + + +  SG +    E   + +WL+ +PKP+A LVWTT +G E+  LC QIG+ VP+D+AILA+EL+PLVSA++PVPIAYIDQ+PRR+G +AA LL R++ G P P EP LV PRGIAERMSV+ + VED++++ A+ FIRE + + I   DVA+   + R+ LE +F   + +S   VIR+TKL +A +LL ET L  QEI  +TGF H ETF R
Sbjct:   98 VCNVVSDETATGRVAAEYFIARGWKNFAYIGKPQSMPYLDRCCPTYVETIQRAGFTTHQRSIQSGSGAVLNQAEMRDIIDWLIEIPKPIATLVWTTTMGYELTKLCHQIGLRVPEDLAILAIELEPLVSALAPVPIAYIDQAPRRIGIEAAKLLNRLMDGNPPPSEPTLVSPRGIAERMSVNAMLVEDDLIQAALAFIRELVNQPITANDVAAATKVPRKTLERQFTTQVGKSVTAVIRQTKLEYAQHLLRETRLATQEIAERTGFHHVETFFR 371          
BLAST of mRNA_M-pyrifera_M_contig87806.20399.1 vs. uniprot
Match: A0A2E2C7J2_9PLAN (HTH araC/xylS-type domain-containing protein n=8 Tax=Planctomycetaceae TaxID=126 RepID=A0A2E2C7J2_9PLAN)

HSP 1 Score: 256 bits (654), Expect = 2.880e-80
Identity = 125/274 (45.62%), Postives = 189/274 (68.98%), Query Frame = 1
Query:    1 VPKVVSDEVACGQMAAEFYLKRGWHFFGFVGPPPQLNYSDKVEKAFASTVGEAGRTVKRFNHEPNSGTITIGQEHPQMAEWLMALPKPVALLVWTTAIGQEIALLCRQIGISVPDDVAILAVELDPLVSAMSPVPIAYIDQSPRRVGAQAAALLERMIQGAPAPDEPVLVPPRGIAERMSVDNLFVEDEIVRQAMDFIRERMAEAIQVTDVASHVALSRRVLENRFEKALRRSPAQVIRRTKLTHAMYLLSETDLTVQEIGFQTGFFHQETFLR 822
            +PKV+SDE AC ++AA+F+L++G+   G++GP P L Y   +E  F   + ++     +F +   +      ++  ++ EWL  LPKPVALLVW++ +G+E+A +C    + +PD VAIL++E DPL+SA+SPVP++ I+Q+P  VG +AA LL+ +IQG   P EP+L+PP  I ER S D LF +D++VR+A+DFIR+   EA+QV+D+  H+ +SRR+LE+RF+KAL RSPA  IR+ KL   + LL ET+LT+ +I  + GF HQE  +R
Sbjct:   99 IPKVISDERACARLAADFFLQKGFRSCGYIGPDPTLKYLPTIENEFQELIEQSEGVCFQFPYYELTKEDDYEKQQKRLKEWLRELPKPVALLVWSSKVGREVATVCVNHHLEIPDQVAILSIEHDPLMSALSPVPLSCINQAPHVVGYEAAQLLDLLIQGESPPAEPILIPPLSIEERASTDTLFADDDLVREAIDFIRQHAQEALQVSDLTDHLNVSRRILEHRFQKALHRSPAAEIRQEKLKRIIKLLQETNLTISQIAARCGFQHQEAMIR 372          
BLAST of mRNA_M-pyrifera_M_contig87806.20399.1 vs. uniprot
Match: A0A2E7KEQ3_9PLAN (HTH araC/xylS-type domain-containing protein n=11 Tax=Gimesia TaxID=1649453 RepID=A0A2E7KEQ3_9PLAN)

HSP 1 Score: 257 bits (656), Expect = 3.040e-80
Identity = 130/274 (47.45%), Postives = 184/274 (67.15%), Query Frame = 1
Query:    1 VPKVVSDEVACGQMAAEFYLKRGWHFFGFVGPPPQLNYSDKVEKAFASTVGEAGRTVKRFNHEPNSGTITIGQEHPQMAEWLMALPKPVALLVWTTAIGQEIALLCRQIGISVPDDVAILAVELDPLVSAMSPVPIAYIDQSPRRVGAQAAALLERMIQGAPAPDEPVLVPPRGIAERMSVDNLFVEDEIVRQAMDFIRERMAEAIQVTDVASHVALSRRVLENRFEKALRRSPAQVIRRTKLTHAMYLLSETDLTVQEIGFQTGFFHQETFLR 822
            +PKVVSDE AC ++AA+F+L +G+  FG++G  P L Y   ++  F S V EAG     F +   +      Q+  ++ EWL  LPKPVALLVW++ +G+E+A +C    + +PD VAIL++E DPL+SA+SPVP++ I+Q P  VG  AA LL++MIQG PAP  PVL+PP  I ER S D LF +D++VR+A+  IR++    +QVTD+   + +SRR+LE+RF+KAL RSPA  IR+ KL     LL ET+LT+ +I  + GF HQE  +R
Sbjct:  125 IPKVVSDERACARVAADFFLNKGFRSFGYIGADPNLKYPPTIQHDFESAVSEAGGVCYDFPYYELTKEADYEQQQHRLKEWLRELPKPVALLVWSSKVGREVATVCVNHHLEIPDQVAILSIEHDPLMSALSPVPLSCINQGPHVVGHAAAQLLDQMIQGQPAPKTPVLIPPLSIEERASTDTLFADDDLVREAIQLIRQQAHLPLQVTDLTQRLNVSRRILEHRFQKALHRSPASEIRQAKLNRITRLLRETNLTISQIAERCGFQHQEAMIR 398          
BLAST of mRNA_M-pyrifera_M_contig87806.20399.1 vs. uniprot
Match: A0A518I534_9PLAN (Xylose operon regulatory protein n=2 Tax=Gimesia TaxID=1649453 RepID=A0A518I534_9PLAN)

HSP 1 Score: 255 bits (651), Expect = 8.370e-80
Identity = 127/274 (46.35%), Postives = 189/274 (68.98%), Query Frame = 1
Query:    1 VPKVVSDEVACGQMAAEFYLKRGWHFFGFVGPPPQLNYSDKVEKAFASTVGEAGRTVKRFNHEPNSGTITIGQEHPQMAEWLMALPKPVALLVWTTAIGQEIALLCRQIGISVPDDVAILAVELDPLVSAMSPVPIAYIDQSPRRVGAQAAALLERMIQGAPAPDEPVLVPPRGIAERMSVDNLFVEDEIVRQAMDFIRERMAEAIQVTDVASHVALSRRVLENRFEKALRRSPAQVIRRTKLTHAMYLLSETDLTVQEIGFQTGFFHQETFLR 822
            +PKVVSD+ AC  +AA F+L++G+  FG++G  P  +Y + +++ F + V +A      F +   +      ++  ++ +WL  LPKPVALLVW++ +G+E+A +C    + +PD VAIL++E DPL+SA+SPVP++ IDQ+P  VG +AA+LL++MIQG PAP+EP L+PP  I ER S D LF +D++VR+A+ FIR+   EAIQV+D+   + +SRR+LE+RF+KAL RSPA  IR+ KL     LL ET+L V +I  + GF HQE  +R
Sbjct:   95 IPKVVSDQRACASLAATFFLEKGFRSFGYIGADPTSHYPETIQQEFQTAVEQAEGICFDFPYYELTKEADYQKQQQRLKQWLWELPKPVALLVWSSKVGREVATVCVNHHLEIPDQVAILSIEHDPLMSALSPVPLSCIDQAPHVVGYEAASLLDQMIQGRPAPEEPTLIPPLKIQERASTDTLFADDDLVREAIQFIRQHAHEAIQVSDLTQQLNVSRRILEHRFQKALHRSPASEIRQEKLKRITKLLQETNLPVSQIADRCGFQHQEAMIR 368          
BLAST of mRNA_M-pyrifera_M_contig87806.20399.1 vs. uniprot
Match: A0A517W4F7_9PLAN (Xylose operon regulatory protein n=2 Tax=Gimesia aquarii TaxID=2527964 RepID=A0A517W4F7_9PLAN)

HSP 1 Score: 253 bits (645), Expect = 5.790e-79
Identity = 124/274 (45.26%), Postives = 185/274 (67.52%), Query Frame = 1
Query:    1 VPKVVSDEVACGQMAAEFYLKRGWHFFGFVGPPPQLNYSDKVEKAFASTVGEAGRTVKRFNHEPNSGTITIGQEHPQMAEWLMALPKPVALLVWTTAIGQEIALLCRQIGISVPDDVAILAVELDPLVSAMSPVPIAYIDQSPRRVGAQAAALLERMIQGAPAPDEPVLVPPRGIAERMSVDNLFVEDEIVRQAMDFIRERMAEAIQVTDVASHVALSRRVLENRFEKALRRSPAQVIRRTKLTHAMYLLSETDLTVQEIGFQTGFFHQETFLR 822
            +PKVVSDE AC  +AA+F+LK+G+  FG++GP P+ NY + +   F   V  A      F +   +      ++  Q+ +WL  LPKPVALLVW++ +G+E++ +C    + +PD VAIL++E DPL+S++SPVP++YI+Q+P  VG  AA LL++MIQ  PAP +PVL+PP  I ER S D LF +D++VR+A+ FIR+     +QV+D+   + +SRR+LE+RF+K+L RSPA  IR+ KL     LL +T+LT+ +I  + GF HQE  +R
Sbjct:   95 IPKVVSDETACANLAAQFFLKKGFRSFGYIGPDPKSNYPETILNQFRRAVKLAEGVCFDFPYYELTKEADYEKQQQQLKQWLWELPKPVALLVWSSKVGREVSTVCVNHHLEIPDQVAILSIEHDPLMSSLSPVPLSYINQAPHAVGYTAATLLDQMIQRKPAPKKPVLIPPLSIEERASTDTLFADDDLVREAVQFIRQHAQGPLQVSDLTEQLNVSRRILEHRFQKSLHRSPASEIRQEKLKRITKLLQDTNLTISQIAARCGFQHQEAMIR 368          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig87806.20399.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7V8V2B5_9BACT7.860e-18999.64Xylose operon regulatory protein n=1 Tax=Bremerell... [more]
UPI001CCA0D611.020e-16987.59XylR family transcriptional regulator n=1 Tax=Brem... [more]
A0A3D3RC96_9PLAN1.000e-10757.66HTH araC/xylS-type domain-containing protein n=2 T... [more]
UPI001CCF2FE11.160e-9956.57substrate-binding domain-containing protein n=1 Ta... [more]
UPI001487951E5.740e-9053.10DNA-binding transcriptional regulator n=1 Tax=Alie... [more]
A0A517LZT5_9BACT1.660e-8348.54Xylose operon regulatory protein n=1 Tax=Rosistill... [more]
A0A2E2C7J2_9PLAN2.880e-8045.62HTH araC/xylS-type domain-containing protein n=8 T... [more]
A0A2E7KEQ3_9PLAN3.040e-8047.45HTH araC/xylS-type domain-containing protein n=11 ... [more]
A0A518I534_9PLAN8.370e-8046.35Xylose operon regulatory protein n=2 Tax=Gimesia T... [more]
A0A517W4F7_9PLAN5.790e-7945.26Xylose operon regulatory protein n=2 Tax=Gimesia a... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig87806contigM-pyrifera_M_contig87806:5..826 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score326.6
Seed ortholog evalue1.1e-86
Seed eggNOG ortholog344747.PM8797T_02159
Preferred namexylR
KEGG rclassRC00376
KEGG koko:K01812,ko:K02529,ko:K16210
KEGG TC2.A.2.5
KEGG ReactionR01482,R01983
KEGG Pathwayko00040,ko01100,map00040,map01100
KEGG ModuleM00061,M00631
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003700,GO:0006355,GO:0008150,GO:0009889,GO:0010468,GO:0010556,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0080090,GO:0140110,GO:1903506,GO:2000112,GO:2001141
EggNOG free text desc.sequence-specific DNA binding
EggNOG OGsCOG1609@1,COG1609@2,COG4977@1,COG4977@2
EC5.3.1.12
COG Functional cat.K
Best tax levelBacteria
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko02000,ko03000
Exons1
Model size822
Cds size822
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816787.4655955-CDS-M-pyrifera_M_contig87806:4..8261622816787.4655955-CDS-M-pyrifera_M_contig87806:4..826Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig87806 5..826 +
1692278178.4593618-CDS-M-pyrifera_M_contig87806:4..8261692278178.4593618-CDS-M-pyrifera_M_contig87806:4..826Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig87806 5..826 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig87806.20399.1prot_M-pyrifera_M_contig87806.20399.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig87806 5..826 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig87806.20399.1

>prot_M-pyrifera_M_contig87806.20399.1 ID=prot_M-pyrifera_M_contig87806.20399.1|Name=mRNA_M-pyrifera_M_contig87806.20399.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=274bp
VPKVVSDEVACGQMAAEFYLKRGWHFFGFVGPPPQLNYSDKVEKAFASTV
GEAGRTVKRFNHEPNSGTITIGQEHPQMAEWLMALPKPVALLVWTTAIGQ
EIALLCRQIGISVPDDVAILAVELDPLVSAMSPVPIAYIDQSPRRVGAQA
AALLERMIQGAPAPDEPVLVPPRGIAERMSVDNLFVEDEIVRQAMDFIRE
RMAEAIQVTDVASHVALSRRVLENRFEKALRRSPAQVIRRTKLTHAMYLL
SETDLTVQEIGFQTGFFHQETFLR
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mRNA from alignment at M-pyrifera_M_contig87806:5..826+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig87806.20399.1 ID=mRNA_M-pyrifera_M_contig87806.20399.1|Name=mRNA_M-pyrifera_M_contig87806.20399.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=822bp|location=Sequence derived from alignment at M-pyrifera_M_contig87806:5..826+ (Macrocystis pyrifera P11B4 male)
GTTCCCAAAGTGGTTTCCGACGAGGTAGCCTGCGGTCAGATGGCGGCCGA GTTTTACTTGAAACGCGGGTGGCACTTCTTCGGGTTCGTGGGGCCTCCGC CGCAGCTCAATTATTCGGACAAGGTCGAAAAGGCTTTCGCTTCCACGGTT GGCGAGGCAGGGCGGACCGTCAAACGTTTCAACCATGAACCGAATTCAGG CACCATTACTATCGGCCAGGAACATCCTCAGATGGCCGAATGGTTGATGG CACTCCCCAAGCCGGTTGCCCTCTTGGTTTGGACGACGGCGATCGGACAA GAGATCGCACTACTTTGCCGACAGATTGGTATCTCGGTACCGGACGACGT AGCGATTTTAGCCGTCGAACTCGACCCGCTTGTCTCGGCCATGTCGCCGG TTCCCATTGCGTACATAGACCAATCCCCCAGGCGTGTCGGAGCCCAAGCC GCCGCGCTGCTGGAAAGAATGATTCAAGGCGCCCCGGCACCTGACGAGCC TGTCTTGGTTCCACCCCGCGGAATTGCCGAACGCATGTCGGTCGACAACT TGTTCGTCGAAGACGAGATCGTTCGCCAAGCCATGGATTTCATTCGCGAG CGTATGGCCGAGGCAATCCAGGTGACCGATGTCGCCTCGCATGTGGCCCT CTCAAGGCGCGTGCTAGAGAACCGTTTTGAGAAGGCGCTTAGGCGTAGCC CTGCCCAGGTTATTCGCCGGACGAAACTAACCCATGCGATGTATTTGCTT AGTGAAACCGATCTGACGGTTCAAGAGATTGGCTTTCAGACCGGGTTCTT TCACCAGGAAACGTTTCTGCGT
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig87806:5..826+

>mRNA_M-pyrifera_M_contig87806.20399.1 ID=mRNA_M-pyrifera_M_contig87806.20399.1|Name=mRNA_M-pyrifera_M_contig87806.20399.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1644bp|location=Sequence derived from alignment at M-pyrifera_M_contig87806:5..826+ (Macrocystis pyrifera P11B4 male)
GTTCCCAAAGTGGTTTCCGACGAGGTAGCCTGCGGTCAGATGGCGGCCGA
GTTTTACTTGAAACGCGGGTGGCACTTCTTCGGGTTCGTGGGGCCTCCGC
CGCAGCTCAATTATTCGGACAAGGTCGAAAAGGCTTTCGCTTCCACGGTT
GGCGAGGCAGGGCGGACCGTCAAACGTTTCAACCATGAACCGAATTCAGG
CACCATTACTATCGGCCAGGAACATCCTCAGATGGCCGAATGGTTGATGG
CACTCCCCAAGCCGGTTGCCCTCTTGGTTTGGACGACGGCGATCGGACAA
GAGATCGCACTACTTTGCCGACAGATTGGTATCTCGGTACCGGACGACGT
AGCGATTTTAGCCGTCGAACTCGACCCGCTTGTCTCGGCCATGTCGCCGG
TTCCCATTGCGTACATAGACCAATCCCCCAGGCGTGTCGGAGCCCAAGCC
GCCGCGCTGCTGGAAAGAATGATTCAAGGCGCCCCGGCACCTGACGAGCC
TGTCTTGGTTCCACCCCGCGGAATTGCCGAACGCATGTCGGTCGACAACT
TGTTCGTCGAAGACGAGATCGTTCGCCAAGCCATGGATTTCATTCGCGAG
CGTATGGCCGAGGCAATCCAGGTGACCGATGTCGCCTCGCATGTGGCCCT
CTCAAGGCGCGTGCTAGAGAACCGTTTTGAGAAGGCGCTTAGGCGTAGCC
CTGCCCAGGTTATTCGCCGGACGAAACTAACCCATGCGATGTATTTGCTT
AGTGAAACCGATCTGACGGTTCAAGAGATTGGCTTTCAGACCGGGTTCTT
TCACCAGGAAACGTTTCTGCGTGTTCCCAAAGTGGTTTCCGACGAGGTAG
CCTGCGGTCAGATGGCGGCCGAGTTTTACTTGAAACGCGGGTGGCACTTC
TTCGGGTTCGTGGGGCCTCCGCCGCAGCTCAATTATTCGGACAAGGTCGA
AAAGGCTTTCGCTTCCACGGTTGGCGAGGCAGGGCGGACCGTCAAACGTT
TCAACCATGAACCGAATTCAGGCACCATTACTATCGGCCAGGAACATCCT
CAGATGGCCGAATGGTTGATGGCACTCCCCAAGCCGGTTGCCCTCTTGGT
TTGGACGACGGCGATCGGACAAGAGATCGCACTACTTTGCCGACAGATTG
GTATCTCGGTACCGGACGACGTAGCGATTTTAGCCGTCGAACTCGACCCG
CTTGTCTCGGCCATGTCGCCGGTTCCCATTGCGTACATAGACCAATCCCC
CAGGCGTGTCGGAGCCCAAGCCGCCGCGCTGCTGGAAAGAATGATTCAAG
GCGCCCCGGCACCTGACGAGCCTGTCTTGGTTCCACCCCGCGGAATTGCC
GAACGCATGTCGGTCGACAACTTGTTCGTCGAAGACGAGATCGTTCGCCA
AGCCATGGATTTCATTCGCGAGCGTATGGCCGAGGCAATCCAGGTGACCG
ATGTCGCCTCGCATGTGGCCCTCTCAAGGCGCGTGCTAGAGAACCGTTTT
GAGAAGGCGCTTAGGCGTAGCCCTGCCCAGGTTATTCGCCGGACGAAACT
AACCCATGCGATGTATTTGCTTAGTGAAACCGATCTGACGGTTCAAGAGA
TTGGCTTTCAGACCGGGTTCTTTCACCAGGAAACGTTTCTGCGT
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