prot_M-pyrifera_M_contig87806.20399.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig87806.20399.1
Unique Nameprot_M-pyrifera_M_contig87806.20399.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length274
Homology
BLAST of mRNA_M-pyrifera_M_contig87806.20399.1 vs. uniprot
Match: A0A7V8V2B5_9BACT (Xylose operon regulatory protein n=1 Tax=Bremerella alba TaxID=980252 RepID=A0A7V8V2B5_9BACT)

HSP 1 Score: 532 bits (1371), Expect = 7.860e-189
Identity = 273/274 (99.64%), Postives = 273/274 (99.64%), Query Frame = 0
Query:    1 VPKVVSDEVACGQMAAEFYLKRGWHFFGFVGPPPQLNYSDKVEKAFASTVGEAGRTVKRFNHEPNSGTITIGQEHPQMAEWLMALPKPVALLVWTTAIGQEIALLCRQIGISVPDDVAILAVELDPLVSAMSPVPIAYIDQSPRRVGAQAAALLERMIQGAPAPDEPVLVPPRGIAERMSVDNLFVEDEIVRQAMDFIRERMAEAIQVTDVASHVALSRRVLENRFEKALRRSPAQVIRRTKLTHAMYLLSETDLTVQEIGFQTGFFHQETFLR 274
            VPKVVSDEVACGQMAAEFYLKRGWHFFGFVGPPPQLNYSDKVEKAFASTVGEAGRTVKRFNHEPNSGTITIGQEHPQMAEWLMALPKPVALLVWTTAIGQEIALLCRQIGISVPDDVAILAVELDPLVSAMSPVPIAYIDQSPRRVGAQAAALLERMIQGAPAP EPVLVPPRGIAERMSVDNLFVEDEIVRQAMDFIRERMAEAIQVTDVASHVALSRRVLENRFEKALRRSPAQVIRRTKLTHAMYLLSETDLTVQEIGFQTGFFHQETFLR
Sbjct:  114 VPKVVSDEVACGQMAAEFYLKRGWHFFGFVGPPPQLNYSDKVEKAFASTVGEAGRTVKRFNHEPNSGTITIGQEHPQMAEWLMALPKPVALLVWTTAIGQEIALLCRQIGISVPDDVAILAVELDPLVSAMSPVPIAYIDQSPRRVGAQAAALLERMIQGAPAPVEPVLVPPRGIAERMSVDNLFVEDEIVRQAMDFIRERMAEAIQVTDVASHVALSRRVLENRFEKALRRSPAQVIRRTKLTHAMYLLSETDLTVQEIGFQTGFFHQETFLR 387          
BLAST of mRNA_M-pyrifera_M_contig87806.20399.1 vs. uniprot
Match: UPI001CCA0D61 (XylR family transcriptional regulator n=1 Tax=Bremerella volcania TaxID=2527984 RepID=UPI001CCA0D61)

HSP 1 Score: 484 bits (1245), Expect = 1.020e-169
Identity = 240/274 (87.59%), Postives = 264/274 (96.35%), Query Frame = 0
Query:    1 VPKVVSDEVACGQMAAEFYLKRGWHFFGFVGPPPQLNYSDKVEKAFASTVGEAGRTVKRFNHEPNSGTITIGQEHPQMAEWLMALPKPVALLVWTTAIGQEIALLCRQIGISVPDDVAILAVELDPLVSAMSPVPIAYIDQSPRRVGAQAAALLERMIQGAPAPDEPVLVPPRGIAERMSVDNLFVEDEIVRQAMDFIRERMAEAIQVTDVASHVALSRRVLENRFEKALRRSPAQVIRRTKLTHAMYLLSETDLTVQEIGFQTGFFHQETFLR 274
            +PKVVSDEVACGQMAAEFYLKRGWHFFGFVGPPP++NYSD+VEKAF S V +AGR V+RF+H PN+ TITIGQEHP+MAEWLM+LPKPVALLVWTTAIGQEIALLCRQ+GI+VPDDVAILAVELDPL+SAMSPVPIAYIDQSPRRVG+QAAALLERMIQG PAP++P+LVPPR IAERMSVDNLFVEDE+VRQAM+FIRE++AE IQVTDVA++VA+SRRVLENRFEKALRRSPAQVIRRTKL HAMYLLSETDLTVQEIGFQTGFFHQETFLR
Sbjct:  110 IPKVVSDEVACGQMAAEFYLKRGWHFFGFVGPPPRMNYSDQVEKAFVSAVTDAGRAVQRFDHAPNAETITIGQEHPKMAEWLMSLPKPVALLVWTTAIGQEIALLCRQLGIAVPDDVAILAVELDPLISAMSPVPIAYIDQSPRRVGSQAAALLERMIQGEPAPEQPILVPPRRIAERMSVDNLFVEDEVVRQAMNFIREKIAEPIQVTDVAANVAVSRRVLENRFEKALRRSPAQVIRRTKLAHAMYLLSETDLTVQEIGFQTGFFHQETFLR 383          
BLAST of mRNA_M-pyrifera_M_contig87806.20399.1 vs. uniprot
Match: A0A3D3RC96_9PLAN (HTH araC/xylS-type domain-containing protein n=2 Tax=Gimesia maris TaxID=122 RepID=A0A3D3RC96_9PLAN)

HSP 1 Score: 326 bits (836), Expect = 1.000e-107
Identity = 158/274 (57.66%), Postives = 210/274 (76.64%), Query Frame = 0
Query:    1 VPKVVSDEVACGQMAAEFYLKRGWHFFGFVGPPPQLNYSDKVEKAFASTVGEAGRTVKRFNHEPNSGTITIGQEHPQMAEWLMALPKPVALLVWTTAIGQEIALLCRQIGISVPDDVAILAVELDPLVSAMSPVPIAYIDQSPRRVGAQAAALLERMIQGAPAPDEPVLVPPRGIAERMSVDNLFVEDEIVRQAMDFIRERMAEAIQVTDVASHVALSRRVLENRFEKALRRSPAQVIRRTKLTHAMYLLSETDLTVQEIGFQTGFFHQETFLR 274
            +P V+SDE ACG++AA+++++ GW  FGFVGPPP   Y+D  +K+++  +   G    +F H    G ++   + P+M +WL++LPKP+AL VWTT +GQEI L CR +G+SVP+DVAILAVELDPLVS++SPVPIAYIDQSP RVG +AA LL++MIQG PAP++ VL+PP GI  R SVD L  EDE VR A++FIR+++A  +QV DVA+ V+LSRR LENRF+K L +SPAQ+IR +KL+ AM LL ET+LT+QEI  +TGFFH ETF R
Sbjct:   93 IPNVISDEAACGRLAADYFIQNGWTNFGFVGPPPNQKYTDVTQKSYSQLLAAGGYHTYQFEHSLGYGKLSFEDQRPEMEKWLLSLPKPIALFVWTTTMGQEIMLFCRHLGLSVPNDVAILAVELDPLVSSLSPVPIAYIDQSPHRVGMEAAKLLQKMIQGEPAPEKSVLIPPSGIVARQSVDTLLGEDEHVRNAIEFIRKKIALPMQVEDVANAVSLSRRSLENRFQKTLGKSPAQMIRESKLSRAMNLLMETNLTIQEIAERTGFFHVETFAR 366          
BLAST of mRNA_M-pyrifera_M_contig87806.20399.1 vs. uniprot
Match: UPI001CCF2FE1 (substrate-binding domain-containing protein n=1 Tax=Bremerella volcania TaxID=2527984 RepID=UPI001CCF2FE1)

HSP 1 Score: 305 bits (780), Expect = 1.160e-99
Identity = 155/274 (56.57%), Postives = 196/274 (71.53%), Query Frame = 0
Query:    1 VPKVVSDEVACGQMAAEFYLKRGWHFFGFVGPPPQLNYSDKVEKAFASTVGEAGRTVKRFNHEPNSGTITIGQEHPQMAEWLMALPKPVALLVWTTAIGQEIALLCRQIGISVPDDVAILAVELDPLVSAMSPVPIAYIDQSPRRVGAQAAALLERMIQGAPAPDEPVLVPPRGIAERMSVDNLFVEDEIVRQAMDFIRERMAEAIQVTDVASHVALSRRVLENRFEKALRRSPAQVIRRTKLTHAMYLLSETDLTVQEIGFQTGFFHQETFLR 274
            +PKVVSDEVACG MAA+F+L  GW  FG +G PP L+YSD+VE AF   + +AG  V+ F   P +  + +G  +  M  WL  +PKP A+LVWTT IG EI  +C ++ +SVPDDVAILAVE+DPL+S+++P PIAY+DQSPRRVG+ A  LL  +I G  AP+ P+L+PPR IAE  SVD  F ED +VR A+ FIRE     IQV+DVAS VA SRRVLE RFEK L+RSPA +IR T+L  A +LLSE+ L++ EI   TGF HQ+TF R
Sbjct:   72 IPKVVSDEVACGHMAADFFLSNGWANFGLIGSPPSLDYSDRVEGAFKERIEQAGMRVETFAQPPENRLLDLGDRYSDMIVWLNEIPKPAAILVWTTLIGHEIMKICNRMKLSVPDDVAILAVEVDPLISSLAPSPIAYVDQSPRRVGSVALNLLLDLIAGKEAPENPLLIPPRRIAELASVDTTFAEDPLVRDAVKFIREMSDRPIQVSDVASAVATSRRVLEQRFEKTLQRSPADMIRSTRLARAKHLLSESSLSINEISQITGFMHQKTFHR 345          
BLAST of mRNA_M-pyrifera_M_contig87806.20399.1 vs. uniprot
Match: UPI001487951E (DNA-binding transcriptional regulator n=1 Tax=Alienimonas chondri TaxID=2681879 RepID=UPI001487951E)

HSP 1 Score: 281 bits (720), Expect = 5.740e-90
Identity = 154/290 (53.10%), Postives = 193/290 (66.55%), Query Frame = 0
Query:    2 PKVVSDEVACGQMAAEFYLKRGWHFFGFVGPPPQLNYSDKVEKAFASTVG-----EAGRTVKRFNHEPNSGTITIGQEHPQMAEWLMALPKPVALLVWTTAIGQEIALLCRQIGIS------------VPDDVAILAVELDPLVSAMSPVPIAYIDQSPRRVGAQAAALLERMIQGAPAPDEPVLVPPRGIAERMSVDNLFVEDEIVRQAMDFIRERMAEAIQVTDVASHVALSRRVLENRFEKALRRSPAQVIRRTKLTHAMYLLSETDLTVQEIGFQTGFFHQETFLR 274
            P+V SDEVACG+MAAEFYL RG+  FGFVGPPP  +Y+D VE+ F   +G       GRT+  F H P S  + +G E  +  +WL  LPKPVALLVWTT I  EI  LCR   +             VPD VA+LAVE DPL+SA+SP+P+AYIDQSPR+VG +AA LLE M+ GAP P+ P+L+PPR +AER+SVD +  +D  VR+A+ +IR  + + I     A  V LSR  LE RF++AL  SPA+ IRRTKL+ A +LL ET LTV EI  +TGF H ETF R
Sbjct:  105 PQVASDEVACGRMAAEFYLSRGFTRFGFVGPPPGQDYTDAVERGFRVGLGLDDGTGGGRTLAVFPHPPASDRLHLGAERDRFLDWLSELPKPVALLVWTTNIAHEIVCLCRDAALRGGRGTTAAADLRVPDRVAVLAVEFDPLLSALSPIPLAYIDQSPRQVGRRAAELLEAMMLGAPPPETPILIPPRRVAERLSVDAMLEDDPEVRRAIAWIRAHVGQPIDAAAAARAVGLSRATLERRFKQALGSSPAREIRRTKLSLARHLLGETALTVAEIADRTGFLHTETFAR 394          
BLAST of mRNA_M-pyrifera_M_contig87806.20399.1 vs. uniprot
Match: A0A517LZT5_9BACT (Xylose operon regulatory protein n=1 Tax=Rosistilla ulvae TaxID=1930277 RepID=A0A517LZT5_9BACT)

HSP 1 Score: 264 bits (675), Expect = 1.660e-83
Identity = 133/274 (48.54%), Postives = 186/274 (67.88%), Query Frame = 0
Query:    1 VPKVVSDEVACGQMAAEFYLKRGWHFFGFVGPPPQLNYSDKVEKAFASTVGEAGRTVKRFNHEPNSGTITIGQEHPQMAEWLMALPKPVALLVWTTAIGQEIALLCRQIGISVPDDVAILAVELDPLVSAMSPVPIAYIDQSPRRVGAQAAALLERMIQGAPAPDEPVLVPPRGIAERMSVDNLFVEDEIVRQAMDFIRERMAEAIQVTDVASHVALSRRVLENRFEKALRRSPAQVIRRTKLTHAMYLLSETDLTVQEIGFQTGFFHQETFLR 274
            V  VVSDE A G++AAE+++ RGW  F ++G P  + Y D+    +  T+  AG T  + + +  SG +    E   + +WL+ +PKP+A LVWTT +G E+  LC QIG+ VP+D+AILA+EL+PLVSA++PVPIAYIDQ+PRR+G +AA LL R++ G P P EP LV PRGIAERMSV+ + VED++++ A+ FIRE + + I   DVA+   + R+ LE +F   + +S   VIR+TKL +A +LL ET L  QEI  +TGF H ETF R
Sbjct:   98 VCNVVSDETATGRVAAEYFIARGWKNFAYIGKPQSMPYLDRCCPTYVETIQRAGFTTHQRSIQSGSGAVLNQAEMRDIIDWLIEIPKPIATLVWTTTMGYELTKLCHQIGLRVPEDLAILAIELEPLVSALAPVPIAYIDQAPRRIGIEAAKLLNRLMDGNPPPSEPTLVSPRGIAERMSVNAMLVEDDLIQAALAFIRELVNQPITANDVAAATKVPRKTLERQFTTQVGKSVTAVIRQTKLEYAQHLLRETRLATQEIAERTGFHHVETFFR 371          
BLAST of mRNA_M-pyrifera_M_contig87806.20399.1 vs. uniprot
Match: A0A2E2C7J2_9PLAN (HTH araC/xylS-type domain-containing protein n=8 Tax=Planctomycetaceae TaxID=126 RepID=A0A2E2C7J2_9PLAN)

HSP 1 Score: 256 bits (654), Expect = 2.880e-80
Identity = 125/274 (45.62%), Postives = 189/274 (68.98%), Query Frame = 0
Query:    1 VPKVVSDEVACGQMAAEFYLKRGWHFFGFVGPPPQLNYSDKVEKAFASTVGEAGRTVKRFNHEPNSGTITIGQEHPQMAEWLMALPKPVALLVWTTAIGQEIALLCRQIGISVPDDVAILAVELDPLVSAMSPVPIAYIDQSPRRVGAQAAALLERMIQGAPAPDEPVLVPPRGIAERMSVDNLFVEDEIVRQAMDFIRERMAEAIQVTDVASHVALSRRVLENRFEKALRRSPAQVIRRTKLTHAMYLLSETDLTVQEIGFQTGFFHQETFLR 274
            +PKV+SDE AC ++AA+F+L++G+   G++GP P L Y   +E  F   + ++     +F +   +      ++  ++ EWL  LPKPVALLVW++ +G+E+A +C    + +PD VAIL++E DPL+SA+SPVP++ I+Q+P  VG +AA LL+ +IQG   P EP+L+PP  I ER S D LF +D++VR+A+DFIR+   EA+QV+D+  H+ +SRR+LE+RF+KAL RSPA  IR+ KL   + LL ET+LT+ +I  + GF HQE  +R
Sbjct:   99 IPKVISDERACARLAADFFLQKGFRSCGYIGPDPTLKYLPTIENEFQELIEQSEGVCFQFPYYELTKEDDYEKQQKRLKEWLRELPKPVALLVWSSKVGREVATVCVNHHLEIPDQVAILSIEHDPLMSALSPVPLSCINQAPHVVGYEAAQLLDLLIQGESPPAEPILIPPLSIEERASTDTLFADDDLVREAIDFIRQHAQEALQVSDLTDHLNVSRRILEHRFQKALHRSPAAEIRQEKLKRIIKLLQETNLTISQIAARCGFQHQEAMIR 372          
BLAST of mRNA_M-pyrifera_M_contig87806.20399.1 vs. uniprot
Match: A0A2E7KEQ3_9PLAN (HTH araC/xylS-type domain-containing protein n=11 Tax=Gimesia TaxID=1649453 RepID=A0A2E7KEQ3_9PLAN)

HSP 1 Score: 257 bits (656), Expect = 3.040e-80
Identity = 130/274 (47.45%), Postives = 184/274 (67.15%), Query Frame = 0
Query:    1 VPKVVSDEVACGQMAAEFYLKRGWHFFGFVGPPPQLNYSDKVEKAFASTVGEAGRTVKRFNHEPNSGTITIGQEHPQMAEWLMALPKPVALLVWTTAIGQEIALLCRQIGISVPDDVAILAVELDPLVSAMSPVPIAYIDQSPRRVGAQAAALLERMIQGAPAPDEPVLVPPRGIAERMSVDNLFVEDEIVRQAMDFIRERMAEAIQVTDVASHVALSRRVLENRFEKALRRSPAQVIRRTKLTHAMYLLSETDLTVQEIGFQTGFFHQETFLR 274
            +PKVVSDE AC ++AA+F+L +G+  FG++G  P L Y   ++  F S V EAG     F +   +      Q+  ++ EWL  LPKPVALLVW++ +G+E+A +C    + +PD VAIL++E DPL+SA+SPVP++ I+Q P  VG  AA LL++MIQG PAP  PVL+PP  I ER S D LF +D++VR+A+  IR++    +QVTD+   + +SRR+LE+RF+KAL RSPA  IR+ KL     LL ET+LT+ +I  + GF HQE  +R
Sbjct:  125 IPKVVSDERACARVAADFFLNKGFRSFGYIGADPNLKYPPTIQHDFESAVSEAGGVCYDFPYYELTKEADYEQQQHRLKEWLRELPKPVALLVWSSKVGREVATVCVNHHLEIPDQVAILSIEHDPLMSALSPVPLSCINQGPHVVGHAAAQLLDQMIQGQPAPKTPVLIPPLSIEERASTDTLFADDDLVREAIQLIRQQAHLPLQVTDLTQRLNVSRRILEHRFQKALHRSPASEIRQAKLNRITRLLRETNLTISQIAERCGFQHQEAMIR 398          
BLAST of mRNA_M-pyrifera_M_contig87806.20399.1 vs. uniprot
Match: A0A518I534_9PLAN (Xylose operon regulatory protein n=2 Tax=Gimesia TaxID=1649453 RepID=A0A518I534_9PLAN)

HSP 1 Score: 255 bits (651), Expect = 8.370e-80
Identity = 127/274 (46.35%), Postives = 189/274 (68.98%), Query Frame = 0
Query:    1 VPKVVSDEVACGQMAAEFYLKRGWHFFGFVGPPPQLNYSDKVEKAFASTVGEAGRTVKRFNHEPNSGTITIGQEHPQMAEWLMALPKPVALLVWTTAIGQEIALLCRQIGISVPDDVAILAVELDPLVSAMSPVPIAYIDQSPRRVGAQAAALLERMIQGAPAPDEPVLVPPRGIAERMSVDNLFVEDEIVRQAMDFIRERMAEAIQVTDVASHVALSRRVLENRFEKALRRSPAQVIRRTKLTHAMYLLSETDLTVQEIGFQTGFFHQETFLR 274
            +PKVVSD+ AC  +AA F+L++G+  FG++G  P  +Y + +++ F + V +A      F +   +      ++  ++ +WL  LPKPVALLVW++ +G+E+A +C    + +PD VAIL++E DPL+SA+SPVP++ IDQ+P  VG +AA+LL++MIQG PAP+EP L+PP  I ER S D LF +D++VR+A+ FIR+   EAIQV+D+   + +SRR+LE+RF+KAL RSPA  IR+ KL     LL ET+L V +I  + GF HQE  +R
Sbjct:   95 IPKVVSDQRACASLAATFFLEKGFRSFGYIGADPTSHYPETIQQEFQTAVEQAEGICFDFPYYELTKEADYQKQQQRLKQWLWELPKPVALLVWSSKVGREVATVCVNHHLEIPDQVAILSIEHDPLMSALSPVPLSCIDQAPHVVGYEAASLLDQMIQGRPAPEEPTLIPPLKIQERASTDTLFADDDLVREAIQFIRQHAHEAIQVSDLTQQLNVSRRILEHRFQKALHRSPASEIRQEKLKRITKLLQETNLPVSQIADRCGFQHQEAMIR 368          
BLAST of mRNA_M-pyrifera_M_contig87806.20399.1 vs. uniprot
Match: A0A517W4F7_9PLAN (Xylose operon regulatory protein n=2 Tax=Gimesia aquarii TaxID=2527964 RepID=A0A517W4F7_9PLAN)

HSP 1 Score: 253 bits (645), Expect = 5.790e-79
Identity = 124/274 (45.26%), Postives = 185/274 (67.52%), Query Frame = 0
Query:    1 VPKVVSDEVACGQMAAEFYLKRGWHFFGFVGPPPQLNYSDKVEKAFASTVGEAGRTVKRFNHEPNSGTITIGQEHPQMAEWLMALPKPVALLVWTTAIGQEIALLCRQIGISVPDDVAILAVELDPLVSAMSPVPIAYIDQSPRRVGAQAAALLERMIQGAPAPDEPVLVPPRGIAERMSVDNLFVEDEIVRQAMDFIRERMAEAIQVTDVASHVALSRRVLENRFEKALRRSPAQVIRRTKLTHAMYLLSETDLTVQEIGFQTGFFHQETFLR 274
            +PKVVSDE AC  +AA+F+LK+G+  FG++GP P+ NY + +   F   V  A      F +   +      ++  Q+ +WL  LPKPVALLVW++ +G+E++ +C    + +PD VAIL++E DPL+S++SPVP++YI+Q+P  VG  AA LL++MIQ  PAP +PVL+PP  I ER S D LF +D++VR+A+ FIR+     +QV+D+   + +SRR+LE+RF+K+L RSPA  IR+ KL     LL +T+LT+ +I  + GF HQE  +R
Sbjct:   95 IPKVVSDETACANLAAQFFLKKGFRSFGYIGPDPKSNYPETILNQFRRAVKLAEGVCFDFPYYELTKEADYEKQQQQLKQWLWELPKPVALLVWSSKVGREVSTVCVNHHLEIPDQVAILSIEHDPLMSSLSPVPLSYINQAPHAVGYTAATLLDQMIQRKPAPKKPVLIPPLSIEERASTDTLFADDDLVREAVQFIRQHAQGPLQVSDLTEQLNVSRRILEHRFQKSLHRSPASEIRQEKLKRITKLLQDTNLTISQIAARCGFQHQEAMIR 368          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig87806.20399.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7V8V2B5_9BACT7.860e-18999.64Xylose operon regulatory protein n=1 Tax=Bremerell... [more]
UPI001CCA0D611.020e-16987.59XylR family transcriptional regulator n=1 Tax=Brem... [more]
A0A3D3RC96_9PLAN1.000e-10757.66HTH araC/xylS-type domain-containing protein n=2 T... [more]
UPI001CCF2FE11.160e-9956.57substrate-binding domain-containing protein n=1 Ta... [more]
UPI001487951E5.740e-9053.10DNA-binding transcriptional regulator n=1 Tax=Alie... [more]
A0A517LZT5_9BACT1.660e-8348.54Xylose operon regulatory protein n=1 Tax=Rosistill... [more]
A0A2E2C7J2_9PLAN2.880e-8045.62HTH araC/xylS-type domain-containing protein n=8 T... [more]
A0A2E7KEQ3_9PLAN3.040e-8047.45HTH araC/xylS-type domain-containing protein n=11 ... [more]
A0A518I534_9PLAN8.370e-8046.35Xylose operon regulatory protein n=2 Tax=Gimesia T... [more]
A0A517W4F7_9PLAN5.790e-7945.26Xylose operon regulatory protein n=2 Tax=Gimesia a... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR018060DNA binding HTH domain, AraC-typeSMARTSM00342aracneu4coord: 205..274
e-value: 3.4E-8
score: 43.2
IPR018060DNA binding HTH domain, AraC-typePFAMPF12833HTH_18coord: 212..274
e-value: 5.6E-13
score: 49.0
IPR018060DNA binding HTH domain, AraC-typePROSITEPS01124HTH_ARAC_FAMILY_2coord: 192..274
score: 21.398
NoneNo IPR availableGENE3D3.40.50.2300coord: 1..183
e-value: 1.1E-19
score: 72.8
NoneNo IPR availableGENE3D1.10.10.60coord: 186..274
e-value: 3.6E-19
score: 70.8
NoneNo IPR availablePFAMPF13377Peripla_BP_3coord: 18..181
e-value: 5.7E-22
score: 78.8
NoneNo IPR availablePANTHERPTHR30146:SF24XYLOSE OPERON REGULATORY PROTEINcoord: 1..236
NoneNo IPR availablePANTHERPTHR30146LACI-RELATED TRANSCRIPTIONAL REPRESSORcoord: 1..236
IPR028082Periplasmic binding protein-like ISUPERFAMILY53822Periplasmic binding protein-like Icoord: 1..173
IPR009057Homeobox-like domain superfamilySUPERFAMILY46689Homeodomain-likecoord: 188..239

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig87806contigM-pyrifera_M_contig87806:5..826 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig87806.20399.1mRNA_M-pyrifera_M_contig87806.20399.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig87806 5..826 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig87806.20399.1 ID=prot_M-pyrifera_M_contig87806.20399.1|Name=mRNA_M-pyrifera_M_contig87806.20399.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=274bp
VPKVVSDEVACGQMAAEFYLKRGWHFFGFVGPPPQLNYSDKVEKAFASTV
GEAGRTVKRFNHEPNSGTITIGQEHPQMAEWLMALPKPVALLVWTTAIGQ
EIALLCRQIGISVPDDVAILAVELDPLVSAMSPVPIAYIDQSPRRVGAQA
AALLERMIQGAPAPDEPVLVPPRGIAERMSVDNLFVEDEIVRQAMDFIRE
RMAEAIQVTDVASHVALSRRVLENRFEKALRRSPAQVIRRTKLTHAMYLL
SETDLTVQEIGFQTGFFHQETFLR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018060HTH_AraC
IPR028082Peripla_BP_I
IPR009057Homeobox-like_sf