mRNA_M-pyrifera_M_contig87279.20283.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig87279.20283.1 vs. uniprot
Match: A0A359EK42_9GAMM (Uncharacterized protein n=5 Tax=Halieaceae TaxID=1706372 RepID=A0A359EK42_9GAMM) HSP 1 Score: 487 bits (1254), Expect = 4.120e-171 Identity = 254/271 (93.73%), Postives = 259/271 (95.57%), Query Frame = 1 Query: 1 AALRACGVSFGEQLLAPMAGVNDEGFWEDAEVVAANEALLSAAGAHWYSLILPGAEAGWPAAALVRFREHAGAILQRGFGGGTVQAAKDPRFCITLPLWLEACAELGIKAQVCTASRAPLEVAQSLQRRDGFPLGYGLRLDLAYRRALAPALPPGSLAVSFPELVEDPVKVMSRLAESLPLETGQNAVATAVRDDLRHHSAPAASDALTQPVLSSADLPALEACIEHHYPNEAMLAEFAAGFVARGAQLTAVGDAHSRSLETIAAKDEDIN 813 AALRACG +FGEQLLAPMAGVNDEGFWEDAEVVAANEALLSAAGAHWYSL+ PG EA WPAAALVRFRE AGAILQRGFG G VQA KDPRFCITLPLWLEACAELGIKAQVCTASRAPLEVAQSLQRRDGFPLGYGLRLDLAYR+ALAPALPPGSLAVSFPELVEDPVKVMSRLAESLPLETGQNAVATAVR DLRHHSAPA S+ LTQPVLS+ADLPALEACIEHHYP EAMLAEFAAGFVARGAQLTAVGDAHSRSLETIAAKDEDIN Sbjct: 29 AALRACGATFGEQLLAPMAGVNDEGFWEDAEVVAANEALLSAAGAHWYSLVSPGGEAVWPAAALVRFREEAGAILQRGFGAGVVQAVKDPRFCITLPLWLEACAELGIKAQVCTASRAPLEVAQSLQRRDGFPLGYGLRLDLAYRKALAPALPPGSLAVSFPELVEDPVKVMSRLAESLPLETGQNAVATAVRSDLRHHSAPAESEPLTQPVLSAADLPALEACIEHHYPTEAMLAEFAAGFVARGAQLTAVGDAHSRSLETIAAKDEDIN 299
BLAST of mRNA_M-pyrifera_M_contig87279.20283.1 vs. uniprot
Match: A0A2E7C581_9GAMM (Uncharacterized protein n=1 Tax=Haliea sp. TaxID=1932666 RepID=A0A2E7C581_9GAMM) HSP 1 Score: 337 bits (864), Expect = 4.840e-112 Identity = 184/285 (64.56%), Postives = 217/285 (76.14%), Query Frame = 1 Query: 1 AALRACGVSFGEQLLAPMAGVNDEGFWEDAEVVAANEALLSAAGAHWYSLILPGAEAGWPAAALVRFREHAGAILQRGFGGGTVQAAKDPRFCITLPLWLEACAELGIKAQVCTASRAPLEVAQSLQRRDGFPLGYGLRLDLAYRRALAPALPPGSLAVSFPELVEDPVKVMSRLAESLPLETGQNAVATAVRDDLRHHSAPAASDA---------------LTQPVLSSADLPALEACIEHHYPNEAMLAEFAAGFVARGAQLTAVGDAHSRSLETIAAKDEDI 810 AAL ACG +FG++LLAPMAGVNDEGFWED +VVAANEALL+AAG WY+ + GAE WP AL RF+ A AILQRGFG G VQ KDPR CITLPLWL ACA+LG+ AQVCTASRAP+EVAQSLQRRDGFPLGYGLRLDLAYRRAL A+PP +LAVSFPEL++D VMSRLA LPL+ G++AVA AVR DLRHHSA A + L QPV+++++L ALEA IE YP +L+E+A GFVARG QLT +G++H+R+L TIA +D I Sbjct: 18 AALHACGATFGDRLLAPMAGVNDEGFWEDIDVVAANEALLAAAGMRWYA-VSRGAECRWPEEALQRFQACAQAILQRGFGSGPVQVVKDPRLCITLPLWLLACADLGVAAQVCTASRAPIEVAQSLQRRDGFPLGYGLRLDLAYRRALDAAVPPSALAVSFPELLQDASGVMSRLATQLPLQAGEDAVAAAVRSDLRHHSASGAVGSXXXXXXXXXXXALNLLEQPVIAASELAALEAAIERQYPVAGLLSEWAEGFVARGTQLTDLGESHTRALATIAERDAQI 301
BLAST of mRNA_M-pyrifera_M_contig87279.20283.1 vs. uniprot
Match: A0A2N5XZU9_9GAMM (Uncharacterized protein n=1 Tax=Kineobactrum sediminis TaxID=1905677 RepID=A0A2N5XZU9_9GAMM) HSP 1 Score: 295 bits (754), Expect = 3.200e-95 Identity = 166/274 (60.58%), Postives = 196/274 (71.53%), Query Frame = 1 Query: 1 AALRACGVSFGEQLLAPMAGVNDEGFWEDAEVVAANEALLSAAGAHWYSLILPGAEA---GWPAAALVRFREHAGAILQRGFGGGTVQAAKDPRFCITLPLWLEACAELGIKAQVCTASRAPLEVAQSLQRRDGFPLGYGLRLDLAYRRALAPALPPGSLAVSFPELVEDPVKVMSRLAESLPLETGQNAVATAVRDDLRHH-SAPAASDALTQPVLSSADLPALEACIEHHYPNEAMLAEFAAGFVARGAQLTAVGDAHSRSLETIAAKDEDI 810 AAL+ACG SFG+ LLAPMAGVN+EGFWEDAEVVA NEALL++ G+ WY+ PG +A WP AA+ RF E A +LQRGFG G VQ KDPRFC+TLPLWL+ CA GI +VCTA R PLEVAQSL RRDGFPLGYGLRLDLAYR+ALA LP L VS+ +L PV VM RLAES+PL A+ATAVR+DLRHH SA L V++ LP LEA IE Y + +L+E A FVARG++LT +G+AHS +L IA +D I Sbjct: 25 AALQACGASFGDNLLAPMAGVNEEGFWEDAEVVALNEALLASVGSSWYA---PGEKAVSGDWPVAAIERFAEQAAVVLQRGFGDGGVQVVKDPRFCLTLPLWLDVCATHGITPRVCTAFRPPLEVAQSLSRRDGFPLGYGLRLDLAYRQALASGLPSAELQVSYADLATAPVPVMQRLAESVPLVINHAALATAVRNDLRHHDSAGDTRGLLATAVIAPESLPDLEAEIETQYSSTTLLSELAVVFVARGSKLTELGEAHSGALAIIAERDAQI 295
BLAST of mRNA_M-pyrifera_M_contig87279.20283.1 vs. uniprot
Match: A0A2D5FGA9_9GAMM (Uncharacterized protein n=2 Tax=Haliea sp. TaxID=1932666 RepID=A0A2D5FGA9_9GAMM) HSP 1 Score: 266 bits (679), Expect = 4.740e-84 Identity = 149/271 (54.98%), Postives = 188/271 (69.37%), Query Frame = 1 Query: 1 AALRACGVSFGEQLLAPMAGVNDEGFWEDAEVVAANEALLSAAGAHWYS---LILPGAEAGWPAAALVRFREHAGAILQRGFGG-GTVQAAKDPRFCITLPLWLEACAELGIKAQVCTASRAPLEVAQSLQRRDGFPLGYGLRLDLAYRRALAPALPPGSLAVSFPELVEDPVKVMSRLAESLPLETGQNAVATAVRDDLRHHSAPAASDALTQPVLSSADLPALEACIEHHYPNEAMLAEFAAGFVARGAQLTAVGDAHSRSLETIAAKD 801 AALRACG SFG++LL P+AGVNDEGFWEDAEVV NE LL+AAG WY+ +L G WPAAAL FR A IL RGFG T+ A KDPRFC+TLPLWL+AC G++ +VC SRAP EVA SL RRDGFP YGLRLDLAYR+++ ALP +L V +P L+ P+ V++RL+E+LPL + A+A AVR DLRH L++ + + +L L A I+ YP ++ L G VARG +L+A+G++HSR+LETIAAKD Sbjct: 19 AALRACGASFGDRLLDPLAGVNDEGFWEDAEVVECNERLLAAAGGSWYAPGDAVLGG---DWPAAALADFRADAQRILGRGFGSPDTLWAIKDPRFCLTLPLWLQACEATGLQPRVCYISRAPREVAGSLLRRDGFPEAYGLRLDLAYRQSVMAALPVETLRVDYPALLASPLSVLARLSEALPLAVDEAALARAVRSDLRHQQVETGDSLLSRADIGAEELADLAALIDQQYPLQSALQGILDGLVARGRELSAIGESHSRALETIAAKD 286
BLAST of mRNA_M-pyrifera_M_contig87279.20283.1 vs. uniprot
Match: A0A7Y1ZHW7_9GAMM (Uncharacterized protein n=1 Tax=Halioglobus sp. TaxID=2024834 RepID=A0A7Y1ZHW7_9GAMM) HSP 1 Score: 218 bits (555), Expect = 1.780e-64 Identity = 126/270 (46.67%), Postives = 162/270 (60.00%), Query Frame = 1 Query: 1 AALRACGVSFGEQLLAPMAGVNDEGFWEDAEVVAANEALLSAAGAHWYSLILPGAEAGWPAAALVRFREHAGAILQRGFGGGTVQAAKDPRFCITLPLWLEACAELGIKAQVCTASRAPLEVAQSLQRRDGFPLGYGLRLDLAYRRALAPALPPGSLAVSFPELVEDPVKVMSRLAESLPLETGQNAVATAVRDDLRHHSAPAASDALTQPVLSSADLPALEACIEHHYPNEAMLAEFAAGFVARGAQLTAVGDAHSRSLETIAAKDEDI 810 AAL ACGV+FGE LLAPM VND GFWE+ VVA NE LL AG WYS++ AE + AA R+ A +LQ +G G V+A KDPR C+TLP WL+ C ELGI C+ R PL +A+SL+ RDG PLGYGLRL Y R A ALPP S + F +L+E P V+ L ++LPL+ + A+ AV L HH A + A + L +A +E YP E L+ A FVARG +LT VG+ H+ +LE I +D+ + Sbjct: 25 AALEACGVAFGEGLLAPMTRVNDRGFWEEESVVALNEELLERAGTAWYSVVADAAELDFSGAAFEDCRKTARELLQADYGSGPVRAIKDPRLCLTLPFWLQMCTELGIDYSACSVHRHPLAIARSLEARDGLPLGYGLRLASLYERRAALALPPDSPRIDFEQLLESPTAVLGPLLQALPLQVDEVALQGAVDASLLHHRG-ADATAASPLELGKLGSDEFDAQVEAQYPLENTLSVIADRFVARGRELTRVGELHTEALEIIEERDDQL 293
BLAST of mRNA_M-pyrifera_M_contig87279.20283.1 vs. uniprot
Match: A0A7Y1ZIF5_9GAMM (Uncharacterized protein n=1 Tax=Halioglobus sp. TaxID=2024834 RepID=A0A7Y1ZIF5_9GAMM) HSP 1 Score: 211 bits (537), Expect = 1.920e-62 Identity = 128/279 (45.88%), Postives = 167/279 (59.86%), Query Frame = 1 Query: 1 AALRACGVSFGEQLLAPMAGVNDEGFWEDAEVVAANEALLSAAGAHWYSLILPGAEAGWPAAALVRFREHAGAILQRGFGGGTVQAAKDPRFCITLPLWLEACAELGIKAQVCTASRAPLEVAQSLQRRDGFPLGYGLRLDLAYRRALAPALPPGSLAVSFPELVEDPVKVMSRLAESLPLETGQNAVATAVRDDLRHHSAP--AASDALTQPVLSSADLPALEACIEHHYPNEAMLAEFAAGFVARGAQLTAVGDAHSRSLETIAAKDEDINALAAEH 831 AAL ACGV+FGE LLAPM VND GFWE VVA NE LL AG WYS+++ A + +A R A +L+ FGGG VQA KDPRFC+TLP WL+ CAELG+ C+ R PL +A+SL+ RDG PLGYGLRL Y R ALPP S V+F +L+E P V+ L ++LPL+ A+A AV LRHH AA+ L + S + AL +E +P L+ A +V RG +LT VG+ H+++L A +D+ + L E+ Sbjct: 25 AALEACGVAFGEGLLAPMTWVNDRGFWEAESVVALNEELLRRAGTAWYSVVVDAAGLDFSGSAFDDCRATARELLRADFGGGPVQALKDPRFCLTLPFWLQVCAELGLDHSACSVHRQPLAIARSLEARDGLPLGYGLRLAALYERLAELALPPASPQVNFEQLLESPETVLRPLLQALPLKMDAAALAGAVDAGLRHHGGADAAAASPLEWGNIGSDEFDAL---LETQFPLLDTLSVLADRYVERGRELTRVGELHTQALAVNAERDDQLAQLREEN 300
BLAST of mRNA_M-pyrifera_M_contig87279.20283.1 vs. uniprot
Match: A0A5C8ZR12_9GAMM (Uncharacterized protein n=1 Tax=Parahaliea aestuarii TaxID=1852021 RepID=A0A5C8ZR12_9GAMM) HSP 1 Score: 200 bits (509), Expect = 2.060e-58 Identity = 128/265 (48.30%), Postives = 160/265 (60.38%), Query Frame = 1 Query: 1 AALRACGVSFGEQLLAPMAGVNDEGFWEDAEVVAANEALLSAAGAHWYSLILPGAEAGWPAAALVRFREHAGAILQRGFGGGTVQAAKDPRFCITLPLWLEACAELGIKAQVCTASRAPLEVAQSLQRRDGFPLGYGLRLDLAYRRALAPALPPGSLAVSFPELVEDPVKVMSRLAESLPLETGQNAVATA-----VRDDLRHHSAPAASDALTQPVLSSADLPALEACIEHHYPNEAMLAEFAAGFVARGAQLTAVGDAHSRSL 780 AAL A G +FG+ L+A MAGVNDEGFWEDAEVVA N+ LL+ GA WYSL G +A P E AG IL RGFG G ++ KDPRFC+TLP WL+AC G+ VC A+RAPLEVA+SLQRRDGFPLG+GLRL Y L LP + V +P L + + + + L E GQ+ V+ A VR +LRHH A + L D+ AL IE YP +E A ARGA+LTA+G++HS++L Sbjct: 26 AALAAAGGTFGDHLIAAMAGVNDEGFWEDAEVVALNDRLLAERGATWYSLAA-GVDAARPDHNDGLLAEAAG-ILSRGFGTGPIEVVKDPRFCLTLPFWLQACDTAGLPVTVCIATRAPLEVARSLQRRDGFPLGFGLRLYSHYLDRLQSDLPEVAHFVPYPALTGNAQEAL----QPLLAELGQSGVSVADASGAVRSELRHHVAGSDEGLLAIAPGGRVDIAALNDEIESRYPQLTTYSELATVVAARGAELTALGESHSQAL 284
BLAST of mRNA_M-pyrifera_M_contig87279.20283.1 vs. uniprot
Match: A0A2E0YU87_9GAMM (Uncharacterized protein n=1 Tax=Halioglobus sp. TaxID=2024834 RepID=A0A2E0YU87_9GAMM) HSP 1 Score: 184 bits (466), Expect = 2.100e-52 Identity = 116/273 (42.49%), Postives = 147/273 (53.85%), Query Frame = 1 Query: 1 AALRACGVSFGEQLLAPMAGVNDEGFWEDAEVVAANEALLSAAGAHWYSLILPGAEAGWPAAALVRFREHAGAILQRGFGGGTVQAAKDPRFCITLPLWLEACAELGIKAQVCTASRAPLEVAQSLQRRDGFPLGYGLRLDLAYRRALAPALPPGSLAVSFPELVEDPVKVMSRLAESLPLETGQNAVATAVRDDLRHHSAPAASDALTQPVLSSA---DLPALEACIEHHYPNEAMLAEFAAGFVARGAQLTAVGDAHSRSLETIAAKDEDI 810 AAL ACG FGE+LL PM GVN+EGFWED V+ NE LL AGA W+S E W + R A IL G + KDPR C+TLP W CA I A VC R+P+E+A+SLQ RD FPLG+GLRL +Y R A L VS+ EL+ P ++RL LPL A+ A+ L H S SDA + L +A DL A+ + + YP E L E A V RG +LT +G H+++L T+ +DE I Sbjct: 25 AALHACGARFGERLLQPMPGVNEEGFWEDPAVIDINETLLRRAGASWFSATTALLEVDWQSGEFADLRAPASEILHAGDAAAALTVIKDPRLCLTLPFWRSLCAGQAIAAAVCLVWRSPMEIARSLQARDDFPLGHGLRLVESYLRCALAAAGDDPLRVSYQELLAAPGDTLARLVRRLPLAVDAAALDRALNPALCHQS----SDADSSSPLHAAHWTDLDAVNSELARLYPLEQTLGEMTAVVVRRGRELTRIGAEHAQALATLDERDEQI 293
BLAST of mRNA_M-pyrifera_M_contig87279.20283.1 vs. uniprot
Match: A0A2G6KQT8_9GAMM (Uncharacterized protein (Fragment) n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A2G6KQT8_9GAMM) HSP 1 Score: 178 bits (452), Expect = 3.080e-50 Identity = 106/240 (44.17%), Postives = 137/240 (57.08%), Query Frame = 1 Query: 106 NEALLSAAGAHWYSLILPGAEAGWPAAALVRFREHAGAILQRGFGGGTVQ--AAKDPRFCITLPLWLEACAELGIKAQVCTASRAPLEVAQSLQRRDGFPLGYGLRLDLAYRRALAPALPPGSLAVSFPELVEDPVKVMSRLAESLPLETGQNAVATAVRDDLRHHSAPAASDALTQPVLSSADLPALEACIEHHYPNEAMLAEFAAGFVARGAQLTAVGDAHSRSLETIAAKDEDINAL 819 N+ALL+A +HWY + L W A R+ A AIL RGF G Q A KDPRFCITLP W + C ++GI VC R PLEVA+SL+ RD FP+GYGLRL LAY + L LP G++ F L+ DPV ++ LAE LP+ + AV AVR DLRH A A S S +L L I+ HYP + VARG +LTA+G+ H+++L T+ +D D+ L Sbjct: 2 NDALLAAIDSHWYDITLVERFIDWHATEFDSHRDQAKAILARGFAGDESQIPAVKDPRFCITLPFWQQVCEQMGIACHVCVIDRPPLEVAKSLKTRDAFPVGYGLRLYLAYWQQLRQTLPQGAVLTRFHTLLADPVAAVAELAEHLPITLNELAVRAAVRQDLRHQHAQAQSP-------DSNNLDMLTQYIDQHYPVSQVAMAGVDALVARGRELTALGEQHTQALATLDQRDLDVREL 234
BLAST of mRNA_M-pyrifera_M_contig87279.20283.1 vs. uniprot
Match: UPI0002E7390F (hypothetical protein n=1 Tax=Rhodanobacter denitrificans TaxID=666685 RepID=UPI0002E7390F) HSP 1 Score: 96.7 bits (239), Expect = 7.020e-19 Identity = 76/210 (36.19%), Postives = 101/210 (48.10%), Query Frame = 1 Query: 19 GVSFGEQLLAPMAGVNDEGFWEDAEVVAANEALLSAAGAHWYSLILPGAEAGWPAAALVRFREHAGAILQRGFGGGTVQAAKDPRFCITLPLWLEACAELGIKAQVCTASRAPLEVAQSLQRRDGFPLGYGLRLDLAYRRALAPA---LPPGSLAVSFPELVEDPVKVMSRLAESL------PLETGQNAVATAVRDDLRHHSAPAASDA 621 G G+++LA A N+ GFWE A++V + ALL+A G W+ L P E A R L F G + A KDPR C+ LPLWL+ EL ++ R P+EVAQSLQ RDG PL L L L Y A A LP V + L+ED M+R A ++ P++ + A+ + RHH A DA Sbjct: 32 GAQLGDRMLASAAD-NESGFWEHADIVRIDNALLNALGRDWHDL-RPLPEGWMHGEAAKAARAALVETLGEQFHGDALWAVKDPRMCLLLPLWLDVLRELDVEPCTLLVVRHPVEVAQSLQVRDGLPLPQSLWLWLRYTVAAEHATRGLP--RAVVGYSSLLEDWRGAMTRAAAAMCIDWPKPMDETEGAIDAFLNVSRRHHERGAVDDA 237 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig87279.20283.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig87279.20283.1 >prot_M-pyrifera_M_contig87279.20283.1 ID=prot_M-pyrifera_M_contig87279.20283.1|Name=mRNA_M-pyrifera_M_contig87279.20283.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=277bp AALRACGVSFGEQLLAPMAGVNDEGFWEDAEVVAANEALLSAAGAHWYSLback to top mRNA from alignment at M-pyrifera_M_contig87279:3..833+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig87279.20283.1 ID=mRNA_M-pyrifera_M_contig87279.20283.1|Name=mRNA_M-pyrifera_M_contig87279.20283.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=831bp|location=Sequence derived from alignment at M-pyrifera_M_contig87279:3..833+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig87279:3..833+ >mRNA_M-pyrifera_M_contig87279.20283.1 ID=mRNA_M-pyrifera_M_contig87279.20283.1|Name=mRNA_M-pyrifera_M_contig87279.20283.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1662bp|location=Sequence derived from alignment at M-pyrifera_M_contig87279:3..833+ (Macrocystis pyrifera P11B4 male)back to top |