mRNA_M-pyrifera_M_contig87279.20283.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig87279.20283.1
Unique NamemRNA_M-pyrifera_M_contig87279.20283.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig87279.20283.1 vs. uniprot
Match: A0A359EK42_9GAMM (Uncharacterized protein n=5 Tax=Halieaceae TaxID=1706372 RepID=A0A359EK42_9GAMM)

HSP 1 Score: 487 bits (1254), Expect = 4.120e-171
Identity = 254/271 (93.73%), Postives = 259/271 (95.57%), Query Frame = 1
Query:    1 AALRACGVSFGEQLLAPMAGVNDEGFWEDAEVVAANEALLSAAGAHWYSLILPGAEAGWPAAALVRFREHAGAILQRGFGGGTVQAAKDPRFCITLPLWLEACAELGIKAQVCTASRAPLEVAQSLQRRDGFPLGYGLRLDLAYRRALAPALPPGSLAVSFPELVEDPVKVMSRLAESLPLETGQNAVATAVRDDLRHHSAPAASDALTQPVLSSADLPALEACIEHHYPNEAMLAEFAAGFVARGAQLTAVGDAHSRSLETIAAKDEDIN 813
            AALRACG +FGEQLLAPMAGVNDEGFWEDAEVVAANEALLSAAGAHWYSL+ PG EA WPAAALVRFRE AGAILQRGFG G VQA KDPRFCITLPLWLEACAELGIKAQVCTASRAPLEVAQSLQRRDGFPLGYGLRLDLAYR+ALAPALPPGSLAVSFPELVEDPVKVMSRLAESLPLETGQNAVATAVR DLRHHSAPA S+ LTQPVLS+ADLPALEACIEHHYP EAMLAEFAAGFVARGAQLTAVGDAHSRSLETIAAKDEDIN
Sbjct:   29 AALRACGATFGEQLLAPMAGVNDEGFWEDAEVVAANEALLSAAGAHWYSLVSPGGEAVWPAAALVRFREEAGAILQRGFGAGVVQAVKDPRFCITLPLWLEACAELGIKAQVCTASRAPLEVAQSLQRRDGFPLGYGLRLDLAYRKALAPALPPGSLAVSFPELVEDPVKVMSRLAESLPLETGQNAVATAVRSDLRHHSAPAESEPLTQPVLSAADLPALEACIEHHYPTEAMLAEFAAGFVARGAQLTAVGDAHSRSLETIAAKDEDIN 299          
BLAST of mRNA_M-pyrifera_M_contig87279.20283.1 vs. uniprot
Match: A0A2E7C581_9GAMM (Uncharacterized protein n=1 Tax=Haliea sp. TaxID=1932666 RepID=A0A2E7C581_9GAMM)

HSP 1 Score: 337 bits (864), Expect = 4.840e-112
Identity = 184/285 (64.56%), Postives = 217/285 (76.14%), Query Frame = 1
Query:    1 AALRACGVSFGEQLLAPMAGVNDEGFWEDAEVVAANEALLSAAGAHWYSLILPGAEAGWPAAALVRFREHAGAILQRGFGGGTVQAAKDPRFCITLPLWLEACAELGIKAQVCTASRAPLEVAQSLQRRDGFPLGYGLRLDLAYRRALAPALPPGSLAVSFPELVEDPVKVMSRLAESLPLETGQNAVATAVRDDLRHHSAPAASDA---------------LTQPVLSSADLPALEACIEHHYPNEAMLAEFAAGFVARGAQLTAVGDAHSRSLETIAAKDEDI 810
            AAL ACG +FG++LLAPMAGVNDEGFWED +VVAANEALL+AAG  WY+ +  GAE  WP  AL RF+  A AILQRGFG G VQ  KDPR CITLPLWL ACA+LG+ AQVCTASRAP+EVAQSLQRRDGFPLGYGLRLDLAYRRAL  A+PP +LAVSFPEL++D   VMSRLA  LPL+ G++AVA AVR DLRHHSA  A  +               L QPV+++++L ALEA IE  YP   +L+E+A GFVARG QLT +G++H+R+L TIA +D  I
Sbjct:   18 AALHACGATFGDRLLAPMAGVNDEGFWEDIDVVAANEALLAAAGMRWYA-VSRGAECRWPEEALQRFQACAQAILQRGFGSGPVQVVKDPRLCITLPLWLLACADLGVAAQVCTASRAPIEVAQSLQRRDGFPLGYGLRLDLAYRRALDAAVPPSALAVSFPELLQDASGVMSRLATQLPLQAGEDAVAAAVRSDLRHHSASGAVGSXXXXXXXXXXXALNLLEQPVIAASELAALEAAIERQYPVAGLLSEWAEGFVARGTQLTDLGESHTRALATIAERDAQI 301          
BLAST of mRNA_M-pyrifera_M_contig87279.20283.1 vs. uniprot
Match: A0A2N5XZU9_9GAMM (Uncharacterized protein n=1 Tax=Kineobactrum sediminis TaxID=1905677 RepID=A0A2N5XZU9_9GAMM)

HSP 1 Score: 295 bits (754), Expect = 3.200e-95
Identity = 166/274 (60.58%), Postives = 196/274 (71.53%), Query Frame = 1
Query:    1 AALRACGVSFGEQLLAPMAGVNDEGFWEDAEVVAANEALLSAAGAHWYSLILPGAEA---GWPAAALVRFREHAGAILQRGFGGGTVQAAKDPRFCITLPLWLEACAELGIKAQVCTASRAPLEVAQSLQRRDGFPLGYGLRLDLAYRRALAPALPPGSLAVSFPELVEDPVKVMSRLAESLPLETGQNAVATAVRDDLRHH-SAPAASDALTQPVLSSADLPALEACIEHHYPNEAMLAEFAAGFVARGAQLTAVGDAHSRSLETIAAKDEDI 810
            AAL+ACG SFG+ LLAPMAGVN+EGFWEDAEVVA NEALL++ G+ WY+   PG +A    WP AA+ RF E A  +LQRGFG G VQ  KDPRFC+TLPLWL+ CA  GI  +VCTA R PLEVAQSL RRDGFPLGYGLRLDLAYR+ALA  LP   L VS+ +L   PV VM RLAES+PL     A+ATAVR+DLRHH SA      L   V++   LP LEA IE  Y +  +L+E A  FVARG++LT +G+AHS +L  IA +D  I
Sbjct:   25 AALQACGASFGDNLLAPMAGVNEEGFWEDAEVVALNEALLASVGSSWYA---PGEKAVSGDWPVAAIERFAEQAAVVLQRGFGDGGVQVVKDPRFCLTLPLWLDVCATHGITPRVCTAFRPPLEVAQSLSRRDGFPLGYGLRLDLAYRQALASGLPSAELQVSYADLATAPVPVMQRLAESVPLVINHAALATAVRNDLRHHDSAGDTRGLLATAVIAPESLPDLEAEIETQYSSTTLLSELAVVFVARGSKLTELGEAHSGALAIIAERDAQI 295          
BLAST of mRNA_M-pyrifera_M_contig87279.20283.1 vs. uniprot
Match: A0A2D5FGA9_9GAMM (Uncharacterized protein n=2 Tax=Haliea sp. TaxID=1932666 RepID=A0A2D5FGA9_9GAMM)

HSP 1 Score: 266 bits (679), Expect = 4.740e-84
Identity = 149/271 (54.98%), Postives = 188/271 (69.37%), Query Frame = 1
Query:    1 AALRACGVSFGEQLLAPMAGVNDEGFWEDAEVVAANEALLSAAGAHWYS---LILPGAEAGWPAAALVRFREHAGAILQRGFGG-GTVQAAKDPRFCITLPLWLEACAELGIKAQVCTASRAPLEVAQSLQRRDGFPLGYGLRLDLAYRRALAPALPPGSLAVSFPELVEDPVKVMSRLAESLPLETGQNAVATAVRDDLRHHSAPAASDALTQPVLSSADLPALEACIEHHYPNEAMLAEFAAGFVARGAQLTAVGDAHSRSLETIAAKD 801
            AALRACG SFG++LL P+AGVNDEGFWEDAEVV  NE LL+AAG  WY+    +L G    WPAAAL  FR  A  IL RGFG   T+ A KDPRFC+TLPLWL+AC   G++ +VC  SRAP EVA SL RRDGFP  YGLRLDLAYR+++  ALP  +L V +P L+  P+ V++RL+E+LPL   + A+A AVR DLRH         L++  + + +L  L A I+  YP ++ L     G VARG +L+A+G++HSR+LETIAAKD
Sbjct:   19 AALRACGASFGDRLLDPLAGVNDEGFWEDAEVVECNERLLAAAGGSWYAPGDAVLGG---DWPAAALADFRADAQRILGRGFGSPDTLWAIKDPRFCLTLPLWLQACEATGLQPRVCYISRAPREVAGSLLRRDGFPEAYGLRLDLAYRQSVMAALPVETLRVDYPALLASPLSVLARLSEALPLAVDEAALARAVRSDLRHQQVETGDSLLSRADIGAEELADLAALIDQQYPLQSALQGILDGLVARGRELSAIGESHSRALETIAAKD 286          
BLAST of mRNA_M-pyrifera_M_contig87279.20283.1 vs. uniprot
Match: A0A7Y1ZHW7_9GAMM (Uncharacterized protein n=1 Tax=Halioglobus sp. TaxID=2024834 RepID=A0A7Y1ZHW7_9GAMM)

HSP 1 Score: 218 bits (555), Expect = 1.780e-64
Identity = 126/270 (46.67%), Postives = 162/270 (60.00%), Query Frame = 1
Query:    1 AALRACGVSFGEQLLAPMAGVNDEGFWEDAEVVAANEALLSAAGAHWYSLILPGAEAGWPAAALVRFREHAGAILQRGFGGGTVQAAKDPRFCITLPLWLEACAELGIKAQVCTASRAPLEVAQSLQRRDGFPLGYGLRLDLAYRRALAPALPPGSLAVSFPELVEDPVKVMSRLAESLPLETGQNAVATAVRDDLRHHSAPAASDALTQPVLSSADLPALEACIEHHYPNEAMLAEFAAGFVARGAQLTAVGDAHSRSLETIAAKDEDI 810
            AAL ACGV+FGE LLAPM  VND GFWE+  VVA NE LL  AG  WYS++   AE  +  AA    R+ A  +LQ  +G G V+A KDPR C+TLP WL+ C ELGI    C+  R PL +A+SL+ RDG PLGYGLRL   Y R  A ALPP S  + F +L+E P  V+  L ++LPL+  + A+  AV   L HH   A + A +   L        +A +E  YP E  L+  A  FVARG +LT VG+ H+ +LE I  +D+ +
Sbjct:   25 AALEACGVAFGEGLLAPMTRVNDRGFWEEESVVALNEELLERAGTAWYSVVADAAELDFSGAAFEDCRKTARELLQADYGSGPVRAIKDPRLCLTLPFWLQMCTELGIDYSACSVHRHPLAIARSLEARDGLPLGYGLRLASLYERRAALALPPDSPRIDFEQLLESPTAVLGPLLQALPLQVDEVALQGAVDASLLHHRG-ADATAASPLELGKLGSDEFDAQVEAQYPLENTLSVIADRFVARGRELTRVGELHTEALEIIEERDDQL 293          
BLAST of mRNA_M-pyrifera_M_contig87279.20283.1 vs. uniprot
Match: A0A7Y1ZIF5_9GAMM (Uncharacterized protein n=1 Tax=Halioglobus sp. TaxID=2024834 RepID=A0A7Y1ZIF5_9GAMM)

HSP 1 Score: 211 bits (537), Expect = 1.920e-62
Identity = 128/279 (45.88%), Postives = 167/279 (59.86%), Query Frame = 1
Query:    1 AALRACGVSFGEQLLAPMAGVNDEGFWEDAEVVAANEALLSAAGAHWYSLILPGAEAGWPAAALVRFREHAGAILQRGFGGGTVQAAKDPRFCITLPLWLEACAELGIKAQVCTASRAPLEVAQSLQRRDGFPLGYGLRLDLAYRRALAPALPPGSLAVSFPELVEDPVKVMSRLAESLPLETGQNAVATAVRDDLRHHSAP--AASDALTQPVLSSADLPALEACIEHHYPNEAMLAEFAAGFVARGAQLTAVGDAHSRSLETIAAKDEDINALAAEH 831
            AAL ACGV+FGE LLAPM  VND GFWE   VVA NE LL  AG  WYS+++  A   +  +A    R  A  +L+  FGGG VQA KDPRFC+TLP WL+ CAELG+    C+  R PL +A+SL+ RDG PLGYGLRL   Y R    ALPP S  V+F +L+E P  V+  L ++LPL+    A+A AV   LRHH     AA+  L    + S +  AL   +E  +P    L+  A  +V RG +LT VG+ H+++L   A +D+ +  L  E+
Sbjct:   25 AALEACGVAFGEGLLAPMTWVNDRGFWEAESVVALNEELLRRAGTAWYSVVVDAAGLDFSGSAFDDCRATARELLRADFGGGPVQALKDPRFCLTLPFWLQVCAELGLDHSACSVHRQPLAIARSLEARDGLPLGYGLRLAALYERLAELALPPASPQVNFEQLLESPETVLRPLLQALPLKMDAAALAGAVDAGLRHHGGADAAAASPLEWGNIGSDEFDAL---LETQFPLLDTLSVLADRYVERGRELTRVGELHTQALAVNAERDDQLAQLREEN 300          
BLAST of mRNA_M-pyrifera_M_contig87279.20283.1 vs. uniprot
Match: A0A5C8ZR12_9GAMM (Uncharacterized protein n=1 Tax=Parahaliea aestuarii TaxID=1852021 RepID=A0A5C8ZR12_9GAMM)

HSP 1 Score: 200 bits (509), Expect = 2.060e-58
Identity = 128/265 (48.30%), Postives = 160/265 (60.38%), Query Frame = 1
Query:    1 AALRACGVSFGEQLLAPMAGVNDEGFWEDAEVVAANEALLSAAGAHWYSLILPGAEAGWPAAALVRFREHAGAILQRGFGGGTVQAAKDPRFCITLPLWLEACAELGIKAQVCTASRAPLEVAQSLQRRDGFPLGYGLRLDLAYRRALAPALPPGSLAVSFPELVEDPVKVMSRLAESLPLETGQNAVATA-----VRDDLRHHSAPAASDALTQPVLSSADLPALEACIEHHYPNEAMLAEFAAGFVARGAQLTAVGDAHSRSL 780
            AAL A G +FG+ L+A MAGVNDEGFWEDAEVVA N+ LL+  GA WYSL   G +A  P        E AG IL RGFG G ++  KDPRFC+TLP WL+AC   G+   VC A+RAPLEVA+SLQRRDGFPLG+GLRL   Y   L   LP  +  V +P L  +  + +    + L  E GQ+ V+ A     VR +LRHH A +    L        D+ AL   IE  YP     +E A    ARGA+LTA+G++HS++L
Sbjct:   26 AALAAAGGTFGDHLIAAMAGVNDEGFWEDAEVVALNDRLLAERGATWYSLAA-GVDAARPDHNDGLLAEAAG-ILSRGFGTGPIEVVKDPRFCLTLPFWLQACDTAGLPVTVCIATRAPLEVARSLQRRDGFPLGFGLRLYSHYLDRLQSDLPEVAHFVPYPALTGNAQEAL----QPLLAELGQSGVSVADASGAVRSELRHHVAGSDEGLLAIAPGGRVDIAALNDEIESRYPQLTTYSELATVVAARGAELTALGESHSQAL 284          
BLAST of mRNA_M-pyrifera_M_contig87279.20283.1 vs. uniprot
Match: A0A2E0YU87_9GAMM (Uncharacterized protein n=1 Tax=Halioglobus sp. TaxID=2024834 RepID=A0A2E0YU87_9GAMM)

HSP 1 Score: 184 bits (466), Expect = 2.100e-52
Identity = 116/273 (42.49%), Postives = 147/273 (53.85%), Query Frame = 1
Query:    1 AALRACGVSFGEQLLAPMAGVNDEGFWEDAEVVAANEALLSAAGAHWYSLILPGAEAGWPAAALVRFREHAGAILQRGFGGGTVQAAKDPRFCITLPLWLEACAELGIKAQVCTASRAPLEVAQSLQRRDGFPLGYGLRLDLAYRRALAPALPPGSLAVSFPELVEDPVKVMSRLAESLPLETGQNAVATAVRDDLRHHSAPAASDALTQPVLSSA---DLPALEACIEHHYPNEAMLAEFAAGFVARGAQLTAVGDAHSRSLETIAAKDEDI 810
            AAL ACG  FGE+LL PM GVN+EGFWED  V+  NE LL  AGA W+S      E  W +      R  A  IL  G     +   KDPR C+TLP W   CA   I A VC   R+P+E+A+SLQ RD FPLG+GLRL  +Y R    A     L VS+ EL+  P   ++RL   LPL     A+  A+   L H S    SDA +   L +A   DL A+ + +   YP E  L E  A  V RG +LT +G  H+++L T+  +DE I
Sbjct:   25 AALHACGARFGERLLQPMPGVNEEGFWEDPAVIDINETLLRRAGASWFSATTALLEVDWQSGEFADLRAPASEILHAGDAAAALTVIKDPRLCLTLPFWRSLCAGQAIAAAVCLVWRSPMEIARSLQARDDFPLGHGLRLVESYLRCALAAAGDDPLRVSYQELLAAPGDTLARLVRRLPLAVDAAALDRALNPALCHQS----SDADSSSPLHAAHWTDLDAVNSELARLYPLEQTLGEMTAVVVRRGRELTRIGAEHAQALATLDERDEQI 293          
BLAST of mRNA_M-pyrifera_M_contig87279.20283.1 vs. uniprot
Match: A0A2G6KQT8_9GAMM (Uncharacterized protein (Fragment) n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A2G6KQT8_9GAMM)

HSP 1 Score: 178 bits (452), Expect = 3.080e-50
Identity = 106/240 (44.17%), Postives = 137/240 (57.08%), Query Frame = 1
Query:  106 NEALLSAAGAHWYSLILPGAEAGWPAAALVRFREHAGAILQRGFGGGTVQ--AAKDPRFCITLPLWLEACAELGIKAQVCTASRAPLEVAQSLQRRDGFPLGYGLRLDLAYRRALAPALPPGSLAVSFPELVEDPVKVMSRLAESLPLETGQNAVATAVRDDLRHHSAPAASDALTQPVLSSADLPALEACIEHHYPNEAMLAEFAAGFVARGAQLTAVGDAHSRSLETIAAKDEDINAL 819
            N+ALL+A  +HWY + L      W A      R+ A AIL RGF G   Q  A KDPRFCITLP W + C ++GI   VC   R PLEVA+SL+ RD FP+GYGLRL LAY + L   LP G++   F  L+ DPV  ++ LAE LP+   + AV  AVR DLRH  A A S         S +L  L   I+ HYP   +        VARG +LTA+G+ H+++L T+  +D D+  L
Sbjct:    2 NDALLAAIDSHWYDITLVERFIDWHATEFDSHRDQAKAILARGFAGDESQIPAVKDPRFCITLPFWQQVCEQMGIACHVCVIDRPPLEVAKSLKTRDAFPVGYGLRLYLAYWQQLRQTLPQGAVLTRFHTLLADPVAAVAELAEHLPITLNELAVRAAVRQDLRHQHAQAQSP-------DSNNLDMLTQYIDQHYPVSQVAMAGVDALVARGRELTALGEQHTQALATLDQRDLDVREL 234          
BLAST of mRNA_M-pyrifera_M_contig87279.20283.1 vs. uniprot
Match: UPI0002E7390F (hypothetical protein n=1 Tax=Rhodanobacter denitrificans TaxID=666685 RepID=UPI0002E7390F)

HSP 1 Score: 96.7 bits (239), Expect = 7.020e-19
Identity = 76/210 (36.19%), Postives = 101/210 (48.10%), Query Frame = 1
Query:   19 GVSFGEQLLAPMAGVNDEGFWEDAEVVAANEALLSAAGAHWYSLILPGAEAGWPAAALVRFREHAGAILQRGFGGGTVQAAKDPRFCITLPLWLEACAELGIKAQVCTASRAPLEVAQSLQRRDGFPLGYGLRLDLAYRRALAPA---LPPGSLAVSFPELVEDPVKVMSRLAESL------PLETGQNAVATAVRDDLRHHSAPAASDA 621
            G   G+++LA  A  N+ GFWE A++V  + ALL+A G  W+ L  P  E      A    R      L   F G  + A KDPR C+ LPLWL+   EL ++       R P+EVAQSLQ RDG PL   L L L Y  A   A   LP     V +  L+ED    M+R A ++      P++  + A+   +    RHH   A  DA
Sbjct:   32 GAQLGDRMLASAAD-NESGFWEHADIVRIDNALLNALGRDWHDL-RPLPEGWMHGEAAKAARAALVETLGEQFHGDALWAVKDPRMCLLLPLWLDVLRELDVEPCTLLVVRHPVEVAQSLQVRDGLPLPQSLWLWLRYTVAAEHATRGLP--RAVVGYSSLLEDWRGAMTRAAAAMCIDWPKPMDETEGAIDAFLNVSRRHHERGAVDDA 237          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig87279.20283.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A359EK42_9GAMM4.120e-17193.73Uncharacterized protein n=5 Tax=Halieaceae TaxID=1... [more]
A0A2E7C581_9GAMM4.840e-11264.56Uncharacterized protein n=1 Tax=Haliea sp. TaxID=1... [more]
A0A2N5XZU9_9GAMM3.200e-9560.58Uncharacterized protein n=1 Tax=Kineobactrum sedim... [more]
A0A2D5FGA9_9GAMM4.740e-8454.98Uncharacterized protein n=2 Tax=Haliea sp. TaxID=1... [more]
A0A7Y1ZHW7_9GAMM1.780e-6446.67Uncharacterized protein n=1 Tax=Halioglobus sp. Ta... [more]
A0A7Y1ZIF5_9GAMM1.920e-6245.88Uncharacterized protein n=1 Tax=Halioglobus sp. Ta... [more]
A0A5C8ZR12_9GAMM2.060e-5848.30Uncharacterized protein n=1 Tax=Parahaliea aestuar... [more]
A0A2E0YU87_9GAMM2.100e-5242.49Uncharacterized protein n=1 Tax=Halioglobus sp. Ta... [more]
A0A2G6KQT8_9GAMM3.080e-5044.17Uncharacterized protein (Fragment) n=1 Tax=Gammapr... [more]
UPI0002E7390F7.020e-1936.19hypothetical protein n=1 Tax=Rhodanobacter denitri... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig87279contigM-pyrifera_M_contig87279:3..833 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score484.6
Seed ortholog evalue3.1e-134
Seed eggNOG ortholog1121937.AUHJ01000006_gene2524
KEGG koko:K20444
KEGG TC4.D.1.3
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Protein conserved in bacteria
EggNOG OGs1RB2G@1224,COG3551@1,COG3551@2
COG Functional cat.D
CAZyGT2,GT4
Best tax levelProteobacteria
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko01005,ko02000
Exons1
Model size831
Cds size831
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816781.9179657-CDS-M-pyrifera_M_contig87279:2..8331622816781.9179657-CDS-M-pyrifera_M_contig87279:2..833Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig87279 3..833 +
1692278175.1582615-CDS-M-pyrifera_M_contig87279:2..8331692278175.1582615-CDS-M-pyrifera_M_contig87279:2..833Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig87279 3..833 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig87279.20283.1prot_M-pyrifera_M_contig87279.20283.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig87279 3..833 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig87279.20283.1

>prot_M-pyrifera_M_contig87279.20283.1 ID=prot_M-pyrifera_M_contig87279.20283.1|Name=mRNA_M-pyrifera_M_contig87279.20283.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=277bp
AALRACGVSFGEQLLAPMAGVNDEGFWEDAEVVAANEALLSAAGAHWYSL
ILPGAEAGWPAAALVRFREHAGAILQRGFGGGTVQAAKDPRFCITLPLWL
EACAELGIKAQVCTASRAPLEVAQSLQRRDGFPLGYGLRLDLAYRRALAP
ALPPGSLAVSFPELVEDPVKVMSRLAESLPLETGQNAVATAVRDDLRHHS
APAASDALTQPVLSSADLPALEACIEHHYPNEAMLAEFAAGFVARGAQLT
AVGDAHSRSLETIAAKDEDINALAAEH
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mRNA from alignment at M-pyrifera_M_contig87279:3..833+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig87279.20283.1 ID=mRNA_M-pyrifera_M_contig87279.20283.1|Name=mRNA_M-pyrifera_M_contig87279.20283.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=831bp|location=Sequence derived from alignment at M-pyrifera_M_contig87279:3..833+ (Macrocystis pyrifera P11B4 male)
GCCGCATTGCGCGCCTGCGGCGTATCCTTTGGCGAGCAGCTCCTGGCACC GATGGCCGGCGTCAACGACGAGGGCTTCTGGGAAGATGCCGAGGTTGTGG CCGCCAATGAGGCGCTACTGTCCGCTGCTGGTGCTCACTGGTATTCCCTG ATTTTGCCGGGGGCCGAGGCGGGCTGGCCGGCCGCTGCGCTGGTTCGCTT CCGGGAGCACGCCGGCGCGATCCTGCAGCGTGGCTTCGGCGGGGGAACGG TGCAGGCGGCAAAGGACCCACGGTTTTGTATCACACTGCCACTCTGGTTA GAGGCGTGTGCCGAGCTGGGGATCAAGGCGCAGGTGTGTACGGCATCGCG AGCGCCACTGGAGGTGGCGCAGTCACTGCAACGCCGGGACGGCTTTCCGC TGGGCTACGGTTTGCGGCTTGATCTGGCTTACCGCAGGGCGCTCGCGCCC GCACTGCCGCCAGGTTCACTGGCCGTGAGTTTCCCGGAGCTGGTCGAGGA CCCGGTCAAGGTCATGTCGCGGCTTGCCGAAAGTCTTCCGCTGGAGACAG GGCAGAATGCTGTGGCAACAGCTGTGCGAGATGATTTACGCCACCACAGT GCACCTGCCGCGAGCGATGCATTGACGCAGCCGGTATTATCCTCCGCGGA TTTGCCGGCGCTGGAGGCCTGCATAGAGCATCATTACCCCAACGAGGCCA TGCTGGCAGAGTTCGCGGCCGGGTTTGTGGCCCGCGGTGCCCAGCTGACT GCAGTCGGCGACGCCCATAGTCGTTCGCTGGAGACCATTGCAGCCAAGGA TGAGGATATCAACGCGCTGGCGGCGGAGCAC
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig87279:3..833+

>mRNA_M-pyrifera_M_contig87279.20283.1 ID=mRNA_M-pyrifera_M_contig87279.20283.1|Name=mRNA_M-pyrifera_M_contig87279.20283.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1662bp|location=Sequence derived from alignment at M-pyrifera_M_contig87279:3..833+ (Macrocystis pyrifera P11B4 male)
GCCGCATTGCGCGCCTGCGGCGTATCCTTTGGCGAGCAGCTCCTGGCACC
GATGGCCGGCGTCAACGACGAGGGCTTCTGGGAAGATGCCGAGGTTGTGG
CCGCCAATGAGGCGCTACTGTCCGCTGCTGGTGCTCACTGGTATTCCCTG
ATTTTGCCGGGGGCCGAGGCGGGCTGGCCGGCCGCTGCGCTGGTTCGCTT
CCGGGAGCACGCCGGCGCGATCCTGCAGCGTGGCTTCGGCGGGGGAACGG
TGCAGGCGGCAAAGGACCCACGGTTTTGTATCACACTGCCACTCTGGTTA
GAGGCGTGTGCCGAGCTGGGGATCAAGGCGCAGGTGTGTACGGCATCGCG
AGCGCCACTGGAGGTGGCGCAGTCACTGCAACGCCGGGACGGCTTTCCGC
TGGGCTACGGTTTGCGGCTTGATCTGGCTTACCGCAGGGCGCTCGCGCCC
GCACTGCCGCCAGGTTCACTGGCCGTGAGTTTCCCGGAGCTGGTCGAGGA
CCCGGTCAAGGTCATGTCGCGGCTTGCCGAAAGTCTTCCGCTGGAGACAG
GGCAGAATGCTGTGGCAACAGCTGTGCGAGATGATTTACGCCACCACAGT
GCACCTGCCGCGAGCGATGCATTGACGCAGCCGGTATTATCCTCCGCGGA
TTTGCCGGCGCTGGAGGCCTGCATAGAGCATCATTACCCCAACGAGGCCA
TGCTGGCAGAGTTCGCGGCCGGGTTTGTGGCCCGCGGTGCCCAGCTGACT
GCAGTCGGCGACGCCCATAGTCGTTCGCTGGAGACCATTGCAGCCAAGGA
TGAGGATATCAACGCGCTGGCGGCGGAGCACGCCGCATTGCGCGCCTGCG
GCGTATCCTTTGGCGAGCAGCTCCTGGCACCGATGGCCGGCGTCAACGAC
GAGGGCTTCTGGGAAGATGCCGAGGTTGTGGCCGCCAATGAGGCGCTACT
GTCCGCTGCTGGTGCTCACTGGTATTCCCTGATTTTGCCGGGGGCCGAGG
CGGGCTGGCCGGCCGCTGCGCTGGTTCGCTTCCGGGAGCACGCCGGCGCG
ATCCTGCAGCGTGGCTTCGGCGGGGGAACGGTGCAGGCGGCAAAGGACCC
ACGGTTTTGTATCACACTGCCACTCTGGTTAGAGGCGTGTGCCGAGCTGG
GGATCAAGGCGCAGGTGTGTACGGCATCGCGAGCGCCACTGGAGGTGGCG
CAGTCACTGCAACGCCGGGACGGCTTTCCGCTGGGCTACGGTTTGCGGCT
TGATCTGGCTTACCGCAGGGCGCTCGCGCCCGCACTGCCGCCAGGTTCAC
TGGCCGTGAGTTTCCCGGAGCTGGTCGAGGACCCGGTCAAGGTCATGTCG
CGGCTTGCCGAAAGTCTTCCGCTGGAGACAGGGCAGAATGCTGTGGCAAC
AGCTGTGCGAGATGATTTACGCCACCACAGTGCACCTGCCGCGAGCGATG
CATTGACGCAGCCGGTATTATCCTCCGCGGATTTGCCGGCGCTGGAGGCC
TGCATAGAGCATCATTACCCCAACGAGGCCATGCTGGCAGAGTTCGCGGC
CGGGTTTGTGGCCCGCGGTGCCCAGCTGACTGCAGTCGGCGACGCCCATA
GTCGTTCGCTGGAGACCATTGCAGCCAAGGATGAGGATATCAACGCGCTG
GCGGCGGAGCAC
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