mRNA_M-pyrifera_M_contig8715.20263.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig8715.20263.1 vs. uniprot
Match: A0A6H5L1Z1_9PHAE (2Fe-2S ferredoxin-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L1Z1_9PHAE) HSP 1 Score: 229 bits (583), Expect = 3.750e-74 Identity = 111/124 (89.52%), Postives = 115/124 (92.74%), Query Frame = 1 Query: 1 VTYVNKAGETVASVDVPADRYIFFATEEAEVDVPIVNKKRMCRNGCCTTCAVKVLEGK--VKAEGALGLLKELKQEGYALTCCSYPKSDLVVQLQEEDDVYMKQFGDDFERGGVEWGGFFLDED 366 VTYVNKAGE VAS DVP DRYIFFATE+A VDVPI+NKKRMCRNGCCTTCAVKVLEGK VK EGALGLLK L+QEGYALTCCSYPKSDLVVQLQEEDDVYMKQFG+DFE GGVEWGGFFLDED Sbjct: 112 VTYVNKAGEEVASADVPVDRYIFFATEDAGVDVPIINKKRMCRNGCCTTCAVKVLEGKARVKQEGALGLLKNLRQEGYALTCCSYPKSDLVVQLQEEDDVYMKQFGNDFEGGGVEWGGFFLDED 235
BLAST of mRNA_M-pyrifera_M_contig8715.20263.1 vs. uniprot
Match: A0A835Z8Q8_9STRA (Ferredoxin n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8Q8_9STRA) HSP 1 Score: 173 bits (439), Expect = 1.490e-52 Identity = 78/122 (63.93%), Postives = 99/122 (81.15%), Query Frame = 1 Query: 1 VTYVNKAGETVASVDVPADRYIFFATEEAEVDVPIVNKKRMCRNGCCTTCAVKVLEGKVKAEGALGLLKELKQEGYALTCCSYPKSDLVVQLQEEDDVYMKQFGDDFERGGVEWGGFFLDED 366 VT NKAGE VA +DVP DRYI+FA E+ D+P+ N +RMCRNGCCTTCA+ V EGKVK EG LGLLK+L+++G+ LTCCSY +D+ +QLQ+ED+VY+KQ+G+ FE GGVEWGGF +ED Sbjct: 94 VTIKNKAGEVVAQMDVPDDRYIYFAFEDEGHDLPLQNGRRMCRNGCCTTCAMHVQEGKVKMEGGLGLLKDLRRDGWTLTCCSYATTDVTLQLQDEDEVYLKQWGETFESGGVEWGGFLPEED 215
BLAST of mRNA_M-pyrifera_M_contig8715.20263.1 vs. uniprot
Match: A0A4D9CSH6_9STRA (2Fe-2S ferredoxin-type domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CSH6_9STRA) HSP 1 Score: 172 bits (435), Expect = 6.390e-52 Identity = 77/122 (63.11%), Postives = 102/122 (83.61%), Query Frame = 1 Query: 1 VTYVNKAGETVASVDVPADRYIFFATEEAEVDVPIVNKKRMCRNGCCTTCAVKVLEGKVKAEGALGLLKELKQEGYALTCCSYPKSDLVVQLQEEDDVYMKQFGDDFERGGVEWGGFFLDED 366 VT V+ +T ++DVP DRYIFFA E++ VD+P+VN KRMCRNGCCTTCAVK+ EGKVK E ALGLL+++K +GYAL+CCS P+SD+V +LQ+ED+VY++Q+G+ FE GGVEWGGF ++D Sbjct: 96 VTVVDPRTKTNYTMDVPEDRYIFFAFEDSGVDLPMVNGKRMCRNGCCTTCAVKMKEGKVKMEAALGLLRDMKNKGYALSCCSLPRSDIVCELQDEDEVYVRQWGETFESGGVEWGGFLPEDD 217
BLAST of mRNA_M-pyrifera_M_contig8715.20263.1 vs. uniprot
Match: A0A7S2V5A4_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V5A4_9STRA) HSP 1 Score: 168 bits (426), Expect = 4.610e-50 Identity = 75/115 (65.22%), Postives = 97/115 (84.35%), Query Frame = 1 Query: 22 GETVASVDVPADRYIFFATEEAEVDVPIVNKKRMCRNGCCTTCAVKVLEGKVKAEGALGLLKELKQEGYALTCCSYPKSDLVVQLQEEDDVYMKQFGDDFERGGVEWGGFFLDED 366 GE V +DVPADRYI+FA E+A +++P++NK+R CRNGCCTTCAVK EGK+K + LGLLKE+K++GY L CCSYP+SDLVV++Q+ED+VY KQ+GD FE GGVEWGGF ++D Sbjct: 143 GEEV-EMDVPADRYIYFAFEDAGIELPLINKERACRNGCCTTCAVKTKEGKMKMDPQLGLLKEMKKQGYGLLCCSYPRSDLVVEVQKEDEVYRKQWGDTFESGGVEWGGFLPEDD 256
BLAST of mRNA_M-pyrifera_M_contig8715.20263.1 vs. uniprot
Match: A0A7S3YL42_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YL42_HETAK) HSP 1 Score: 154 bits (390), Expect = 4.580e-45 Identity = 72/125 (57.60%), Postives = 95/125 (76.00%), Query Frame = 1 Query: 1 VTYVNKAGETVASVDVPADRYIFFATEEAEVDVPIVNKKR---MCRNGCCTTCAVKVLEGKVKAEGALGLLKELKQEGYALTCCSYPKSDLVVQLQEEDDVYMKQFGDDFERGGVEWGGFFLDED 366 VT N T + VP DRYIFF EE ++ VPI++ +R MCRNGCCTTCAVKV+EGKVK + +GL+KEL++EGYAL CC+YP+SDLV+++ ED+ Y+KQ+G+ FE GGVEWGGF ++D Sbjct: 96 VTVKNVDEGTEVTHMVPIDRYIFFQFEEDDIPVPIISGQRGERMCRNGCCTTCAVKVVEGKVKQDAQIGLMKELRKEGYALMCCAYPRSDLVLEVTAEDECYIKQWGESFESGGVEWGGFLPEDD 220
BLAST of mRNA_M-pyrifera_M_contig8715.20263.1 vs. uniprot
Match: A0A482T133_9ARCH (2Fe-2S iron-sulfur cluster binding domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482T133_9ARCH) HSP 1 Score: 146 bits (369), Expect = 3.990e-42 Identity = 68/118 (57.63%), Postives = 86/118 (72.88%), Query Frame = 1 Query: 13 NKAGETVASVDVPADRYIFFATEEAEVDVPIVNKKRMCRNGCCTTCAVKVLEGKVKAEGALGLLKELKQEGYALTCCSYPKSDLVVQLQEEDDVYMKQFGDDFERGGVEWGGFFLDED 366 K GE + VP DRYI+F EE V++PI NK RMCR GCCT C VKV EGKVK + LGLLKE + +GYAL+CC+YPKSD+V +LQ+ED++Y+KQ+ + FE GGV WGG + D Sbjct: 85 KKTGEEFVQM-VPEDRYIYFYFEEQGVELPIHNKARMCRQGCCTICTVKVSEGKVKMDAPLGLLKEFRNDGYALSCCAYPKSDVVCELQDEDEMYIKQWAEGFEGGGVIWGGVLPEHD 201
BLAST of mRNA_M-pyrifera_M_contig8715.20263.1 vs. uniprot
Match: A0A7S1ER34_9RHOD (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S1ER34_9RHOD) HSP 1 Score: 142 bits (357), Expect = 1.030e-40 Identity = 68/122 (55.74%), Postives = 86/122 (70.49%), Query Frame = 1 Query: 1 VTYVNKAGETVASVDVPADRYIFFATEEAEVDVPIVNKKRMCRNGCCTTCAVKVLEGKVKAEGALGLLKELKQEGYALTCCSYPKSDLVVQLQEEDDVYMKQFGDDFERGGVEWGGFFLDED 366 VT + A SV+VP DRYI+ + EE D+P CR+GCCTTCAV++ +G V E ALGL+K L+++GYAL C SYP+SDLV LQ+ D+VY+KQFG+ FE GG EWGG FLDED Sbjct: 53 VTIKDPAKNVTHSVEVPVDRYIWHSMEEQGYDIPA-----SCRHGCCTTCAVRIEQGSVDQEEALGLMKALREQGYALLCVSYPESDLVATLQDADEVYVKQFGNSFESGGKEWGGVFLDED 169
BLAST of mRNA_M-pyrifera_M_contig8715.20263.1 vs. uniprot
Match: A0A5J4YT31_PORPP (Ferredoxin-1 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YT31_PORPP) HSP 1 Score: 141 bits (355), Expect = 4.820e-40 Identity = 68/122 (55.74%), Postives = 85/122 (69.67%), Query Frame = 1 Query: 1 VTYVNKAGETVASVDVPADRYIFFATEEAEVDVPIVNKKRMCRNGCCTTCAVKVLEGKVKAEGALGLLKELKQEGYALTCCSYPKSDLVVQLQEEDDVYMKQFGDDFERGGVEWGGFFLDED 366 VT + SV VP DRYI+ A EE D+P CR+GCCTTCAV++ G V+ + ALGLL+E++ +GYAL C SYPKSD+V LQ+ED+VY+KQFG FE+GG EWGG FLDED Sbjct: 82 VTVHDPKKNATYSVQVPEDRYIWHAMEEQGYDIPA-----SCRHGCCTTCAVRIESGAVQQDQALGLLREMRDQGYALLCVSYPKSDIVATLQDEDEVYIKQFGGTFEQGGKEWGGVFLDED 198
BLAST of mRNA_M-pyrifera_M_contig8715.20263.1 vs. uniprot
Match: W7TUL4_9STRA (Ferredoxin (2fe-2s) n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TUL4_9STRA) HSP 1 Score: 141 bits (355), Expect = 8.470e-40 Identity = 64/99 (64.65%), Postives = 83/99 (83.84%), Query Frame = 1 Query: 1 VTYVNKAGETVASVDVPADRYIFFATEEAEVDVPIVNKKRMCRNGCCTTCAVKVLEGKVKAEGALGLLKELKQEGYALTCCSYPKSDLVVQLQEEDDVY 297 VT V+ +T ++DVP DRYIFFA E++ VD+P+VN KRMCRNGCCTTCAVK+ EGKVK E ALGLL+++K +GYAL+CCS P+SD+V +LQ+ED+VY Sbjct: 96 VTVVDPRTKTNYTMDVPEDRYIFFAFEDSGVDLPMVNGKRMCRNGCCTTCAVKMKEGKVKMEAALGLLRDMKNKGYALSCCSLPRSDIVCELQDEDEVY 194
BLAST of mRNA_M-pyrifera_M_contig8715.20263.1 vs. uniprot
Match: A0A7S1TD70_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TD70_9RHOD) HSP 1 Score: 135 bits (340), Expect = 3.260e-38 Identity = 66/122 (54.10%), Postives = 83/122 (68.03%), Query Frame = 1 Query: 1 VTYVNKAGETVASVDVPADRYIFFATEEAEVDVPIVNKKRMCRNGCCTTCAVKVLEGKVKAEGALGLLKELKQEGYALTCCSYPKSDLVVQLQEEDDVYMKQFGDDFERGGVEWGGFFLDED 366 VT + A V VP DRYI++ EE D+P CRNGCCTTCA +V G+V + ALGLLKE+K +GYAL C SYP+SD+ V LQ+ D+VY +QFGD FE+GGVEWGGF +E+ Sbjct: 47 VTVRDPAKNVVYETQVPEDRYIWWEMEEQGFDIPA-----SCRNGCCTTCAGRVTSGEVSQDEALGLLKEIKAQGYALLCVSYPRSDVEVTLQDIDEVYCRQFGDTFEQGGVEWGGFLPEEE 163 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig8715.20263.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig8715.20263.1 >prot_M-pyrifera_M_contig8715.20263.1 ID=prot_M-pyrifera_M_contig8715.20263.1|Name=mRNA_M-pyrifera_M_contig8715.20263.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=123bp VTYVNKAGETVASVDVPADRYIFFATEEAEVDVPIVNKKRMCRNGCCTTCback to top mRNA from alignment at M-pyrifera_M_contig8715:444..1706+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig8715.20263.1 ID=mRNA_M-pyrifera_M_contig8715.20263.1|Name=mRNA_M-pyrifera_M_contig8715.20263.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=1263bp|location=Sequence derived from alignment at M-pyrifera_M_contig8715:444..1706+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig8715:444..1706+ >mRNA_M-pyrifera_M_contig8715.20263.1 ID=mRNA_M-pyrifera_M_contig8715.20263.1|Name=mRNA_M-pyrifera_M_contig8715.20263.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=738bp|location=Sequence derived from alignment at M-pyrifera_M_contig8715:444..1706+ (Macrocystis pyrifera P11B4 male)back to top |