mRNA_M-pyrifera_M_contig86829.20192.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig86829.20192.1
Unique NamemRNA_M-pyrifera_M_contig86829.20192.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig86829.20192.1 vs. uniprot
Match: A0A2D5W562_9BACT (Sigma-54-dependent Fis family transcriptional regulator n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A2D5W562_9BACT)

HSP 1 Score: 357 bits (915), Expect = 4.490e-119
Identity = 181/258 (70.16%), Postives = 211/258 (81.78%), Query Frame = 1
Query:    1 FVAPNCAAMNESLIESELFGHVKGAFTGALTAKEGLFAAADGGTLFLDEIGDMPLGLQAKLLRVIETREVVPVGGNQPRKVDIRLVAATNQNLEEMVAAGTFREDLLFRLKVVSIELPALKDRPGDVPLLVDHFIHQFAEEHGRPIEGIDAEARTALMRHAWPGNVRELRNTIENMVLLSRENVLSLDDVPESIRATQNATTT---GPAALAGRSLEEVERDLIQANLDFVDGNRAKAAKILGIGERTLYRKIKEYGL 765
            FVA NCAAM+E LIESELFGHVKGAFTGA +AKEG  A ADGGTLFLDE+GDMPL  QAKLLRV+ETREV PVGGN+ R VDIRLVAAT+++L  MV AGTFREDLLFRL+VV++ LP L++R GDVPLL++HF+ + AE+HGRP+ GI  EART L+R+ WPGNVRELRN +ENMVLL+   VL+ +DVP +IR    A  +   G A LAGRSL EVERDLI ANL  ++GNR K AK+LGIGERTLYRKIKEYGL
Sbjct:  204 FVAVNCAAMSEGLIESELFGHVKGAFTGAASAKEGRLAYADGGTLFLDEVGDMPLSTQAKLLRVLETREVTPVGGNKTRSVDIRLVAATHRDLSAMVTAGTFREDLLFRLQVVTLALPPLRERAGDVPLLLEHFLREMAEQHGRPVRGITPEARTRLVRYDWPGNVRELRNAVENMVLLAAGEVLTEEDVPAAIREASGAPASPGPGQATLAGRSLAEVERDLIAANLSLMEGNREKTAKLLGIGERTLYRKIKEYGL 461          
BLAST of mRNA_M-pyrifera_M_contig86829.20192.1 vs. uniprot
Match: A0A7C2B284_9BACT (Sigma-54-dependent Fis family transcriptional regulator n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A7C2B284_9BACT)

HSP 1 Score: 352 bits (902), Expect = 4.430e-117
Identity = 178/257 (69.26%), Postives = 208/257 (80.93%), Query Frame = 1
Query:    1 FVAPNCAAMNESLIESELFGHVKGAFTGALTAKEGLFAAADGGTLFLDEIGDMPLGLQAKLLRVIETREVVPVGGNQPRKVDIRLVAATNQNLEEMVAAGTFREDLLFRLKVVSIELPALKDRPGDVPLLVDHFIHQFAEEHGRPIEGIDAEARTALMRHAWPGNVRELRNTIENMVLLSRENVLSLDDVPESIRAT--QNATTTGPAALAGRSLEEVERDLIQANLDFVDGNRAKAAKILGIGERTLYRKIKEYGL 765
            FVA NCAA+++ LIESELFGHVKGAFTGA+ AKEG+   ADGGTLFLDE+GDMPL  QAKLLRV+ETREV PVGG+Q R VDIRLVAATNQ L E V  G FREDLLFRL+VV+IELP L++R GDVPLL+DHFIH  AEEHGR + GI  EAR AL+R+ WPGNVRELRN IENMV+L+   +L LDDVPE IR+   +     G   LAGR+L+EVERDLI+ANL   +GNR +AAK+ G+GERTLYRK+KEYG+
Sbjct:  206 FVAVNCAALSQGLIESELFGHVKGAFTGAVGAKEGMIVHADGGTLFLDEVGDMPLETQAKLLRVLETREVQPVGGSQVRPVDIRLVAATNQPLRERVEEGKFREDLLFRLQVVTIELPPLRERSGDVPLLIDHFIHTLAEEHGRDVTGITPEARAALVRYDWPGNVRELRNAIENMVVLTSGQLLDLDDVPEHIRSAGGERRANAGGYELAGRTLQEVERDLIEANLALAEGNRQRAAKLTGVGERTLYRKLKEYGI 462          
BLAST of mRNA_M-pyrifera_M_contig86829.20192.1 vs. uniprot
Match: A0A518CZW5_9BACT (DNA-binding transcriptional response regulator n=1 Tax=Planctomycetes bacterium Pla163 TaxID=2528008 RepID=A0A518CZW5_9BACT)

HSP 1 Score: 348 bits (893), Expect = 8.710e-116
Identity = 177/256 (69.14%), Postives = 206/256 (80.47%), Query Frame = 1
Query:    1 FVAPNCAAMNESLIESELFGHVKGAFTGALTAKEGLFAAADGGTLFLDEIGDMPLGLQAKLLRVIETREVVPVGGNQPRKVDIRLVAATNQNLEEMVAAGTFREDLLFRLKVVSIELPALKDRPGDVPLLVDHFIHQFAEEHGRPIEGIDAEARTALMRHAWPGNVRELRNTIENMVLLSRENVLSLDDVPESIR-ATQNATTTGPAALAGRSLEEVERDLIQANLDFVDGNRAKAAKILGIGERTLYRKIKEYGL 765
            FVA NCAA++E LIESELFGHVKGAFTGA  A EG    ADGGTLFLDE+GDMPL  QAKLLR +E REV PVGGNQ +KVDIRLVAATNQ LEE V AG FREDLL+RLKVV+++LP L++R GD+PLLVDHF+ +  + HGR I GI  +AR  LM + WPGNVRELRN +ENMVLL+R +V+ +DDVPE IR A +     G  +LAGRSL+EVER+LI+ANL F +GNR KAA ILGIGERTLYRKI+EYGL
Sbjct:  203 FVAMNCAALSEGLIESELFGHVKGAFTGAFAASEGRMVYADGGTLFLDEVGDMPLDTQAKLLRALELREVQPVGGNQVKKVDIRLVAATNQRLEERVKAGKFREDLLYRLKVVTLDLPPLRERAGDIPLLVDHFLVELTKAHGREIRGITPKARAVLMGYGWPGNVRELRNAVENMVLLARSDVIDVDDVPEPIRSAPRTPAGGGTESLAGRSLKEVERELIEANLAFAEGNRQKAAGILGIGERTLYRKIREYGL 458          
BLAST of mRNA_M-pyrifera_M_contig86829.20192.1 vs. uniprot
Match: A0A2D6HE59_9BACT (Sigma-54-dependent Fis family transcriptional regulator n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A2D6HE59_9BACT)

HSP 1 Score: 347 bits (891), Expect = 1.590e-115
Identity = 175/258 (67.83%), Postives = 210/258 (81.40%), Query Frame = 1
Query:    1 FVAPNCAAMNESLIESELFGHVKGAFTGALTAKEGLFAAADGGTLFLDEIGDMPLGLQAKLLRVIETREVVPVGGNQPRKVDIRLVAATNQNLEEMVAAGTFREDLLFRLKVVSIELPALKDRPGDVPLLVDHFIHQFAEEHGRPIEGIDAEARTALMRHAWPGNVRELRNTIENMVLLSRENVLSLDDVPESIRATQNATTTGPA---ALAGRSLEEVERDLIQANLDFVDGNRAKAAKILGIGERTLYRKIKEYGL 765
            FVA NCAAM+E LIESELFGHVKGAFTGA+  KEG    ADGGTLFLDE+GDMPL  QAKLLRV+ETREVVPVGGN+ RKVDIRLVAATN++LE MV  G+FREDLLFRL+V++++LPAL++RPGDVPLL+DHFI +  EEHGR +  I  EAR  L+RHAWPGNVRELRN IENMV+L+  +VL + D+P  +   +N+   G A   ALAGRSL EVER LI+ NL  ++GNR K A++LG+GERTLYRK++EYGL
Sbjct:  199 FVAVNCAAMSEGLIESELFGHVKGAFTGAIAGKEGRIVYADGGTLFLDEVGDMPLETQAKLLRVLETREVVPVGGNEQRKVDIRLVAATNRDLETMVTEGSFREDLLFRLRVIAVDLPALRERPGDVPLLIDHFIGELNEEHGRSVRAITPEARAILVRHAWPGNVRELRNAIENMVVLAGGDVLDVGDLPHGLE--ENSAQRGGAGGYALAGRSLAEVERALIEENLALMEGNREKTARVLGMGERTLYRKLREYGL 454          
BLAST of mRNA_M-pyrifera_M_contig86829.20192.1 vs. uniprot
Match: A0A800G3C0_9BACT (Sigma-54-dependent Fis family transcriptional regulator n=2 Tax=cellular organisms TaxID=131567 RepID=A0A800G3C0_9BACT)

HSP 1 Score: 346 bits (887), Expect = 7.500e-115
Identity = 168/255 (65.88%), Postives = 207/255 (81.18%), Query Frame = 1
Query:    1 FVAPNCAAMNESLIESELFGHVKGAFTGALTAKEGLFAAADGGTLFLDEIGDMPLGLQAKLLRVIETREVVPVGGNQPRKVDIRLVAATNQNLEEMVAAGTFREDLLFRLKVVSIELPALKDRPGDVPLLVDHFIHQFAEEHGRPIEGIDAEARTALMRHAWPGNVRELRNTIENMVLLSRENVLSLDDVPESIRATQNATTTGPAALAGRSLEEVERDLIQANLDFVDGNRAKAAKILGIGERTLYRKIKEYGL 765
            FVA NCAA++E LIESELFGHVKGAFTGA+  K+G  A ADGGTLFLDE+GDMPL  QAKLLRV+E REV  VGG+ P KVDIRLVAATN++L  MV A  FR+DLLFRL+VV++ELP L+DRPGD+PLL+DHF+ + +E+HGR I G+  EAR  L R+ WPGNVRELRN +ENMVLL R+  + L+D+P  +R   +  + G   LAGRSL+EVE++LI+ NLD +DGNRA+AA++LGIGERTLYRK+KEYGL
Sbjct:  206 FVAVNCAALSEGLIESELFGHVKGAFTGAIGEKKGQVAHADGGTLFLDEVGDMPLATQAKLLRVLEEREVTKVGGHDPEKVDIRLVAATNRDLPAMVEASEFRQDLLFRLQVVTLELPPLRDRPGDLPLLLDHFVSELSEQHGRTITGMSPEARAVLSRYPWPGNVRELRNAVENMVLLCRDGSIGLEDLPVGVRGGDDQASGGSVVLAGRSLQEVEKELIRVNLDLMDGNRAQAAEVLGIGERTLYRKLKEYGL 460          
BLAST of mRNA_M-pyrifera_M_contig86829.20192.1 vs. uniprot
Match: A0A2D5XQ80_9BACT (Sigma-54-dependent Fis family transcriptional regulator n=2 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A2D5XQ80_9BACT)

HSP 1 Score: 344 bits (882), Expect = 4.410e-114
Identity = 170/255 (66.67%), Postives = 208/255 (81.57%), Query Frame = 1
Query:    1 FVAPNCAAMNESLIESELFGHVKGAFTGALTAKEGLFAAADGGTLFLDEIGDMPLGLQAKLLRVIETREVVPVGGNQPRKVDIRLVAATNQNLEEMVAAGTFREDLLFRLKVVSIELPALKDRPGDVPLLVDHFIHQFAEEHGRPIEGIDAEARTALMRHAWPGNVRELRNTIENMVLLSRENVLSLDDVPESIRATQNATTTGPAALAGRSLEEVERDLIQANLDFVDGNRAKAAKILGIGERTLYRKIKEYGL 765
            FVA NCAAM+E LIESELFGH +GAFTGA+  K+G  A ADGGTLFLDE+GDMPL  QAKLLRV+E+REVV VGG++P+KVDIRLVAATN++L  MVA GTFREDLLFRL+VVSI+LP L+DR GD+PLL+++F+   A EHGRP+ GI AEAR  L RH WPGNVRELRN +ENMVLL++   L ++D+PE++ A    +  G   LAGRSL E+E+ LI+ANL+ ++ NR + AK+LGIGERTLYRKIKEYGL
Sbjct:  206 FVAVNCAAMSEGLIESELFGHKRGAFTGAVAEKQGRIAYADGGTLFLDEVGDMPLETQAKLLRVLESREVVQVGGHEPKKVDIRLVAATNRDLRSMVAEGTFREDLLFRLQVVSIDLPPLRDRVGDLPLLLEYFVRTLAAEHGRPVTGISAEARAVLARHDWPGNVRELRNAVENMVLLAQGETLQIEDLPETVLAGDGKSRGGQLDLAGRSLAEMEQALIKANLELMEDNRERTAKVLGIGERTLYRKIKEYGL 460          
BLAST of mRNA_M-pyrifera_M_contig86829.20192.1 vs. uniprot
Match: A0A518BJN9_9BACT (DNA-binding transcriptional response regulator n=1 Tax=Planctomycetes bacterium Pla133 TaxID=2528011 RepID=A0A518BJN9_9BACT)

HSP 1 Score: 342 bits (876), Expect = 3.560e-113
Identity = 168/257 (65.37%), Postives = 207/257 (80.54%), Query Frame = 1
Query:    1 FVAPNCAAMNESLIESELFGHVKGAFTGALTAKEGLFAAADGGTLFLDEIGDMPLGLQAKLLRVIETREVVPVGGNQPRKVDIRLVAATNQNLEEMVAAGTFREDLLFRLKVVSIELPALKDRPGDVPLLVDHFIHQFAEEHGRPIEGIDAEARTALMRHAWPGNVRELRNTIENMVLLSRENVLSLDDVPESIRATQNATTTGPAA--LAGRSLEEVERDLIQANLDFVDGNRAKAAKILGIGERTLYRKIKEYGL 765
            FVA NCAA++E LIESELFGHVKG+FTGA+T  EG    ADGGTLFLDE+GDMPL  QAKLLRV+ETREV PVGGN  +KVDIRL+AATN +L ++V+ G FREDLL+RL+VV+++LP L++R GDVPLL+DH++H+ + +HGR + GI  EAR  L+R+AWPGNVRELRN +ENMVLL+R +V+ +DDVPE +         G     L GRSL+EVERDLI ANL  V+GNR KAA++LGIGERTLYRK+KEYGL
Sbjct:  204 FVAMNCAALSEGLIESELFGHVKGSFTGAVTHNEGRMVYADGGTLFLDEVGDMPLDTQAKLLRVLETREVQPVGGNTTKKVDIRLLAATNHDLRDLVSKGKFREDLLYRLQVVTVDLPPLRERVGDVPLLLDHYVHELSAQHGREVRGITPEARAVLVRYAWPGNVRELRNVVENMVLLTRSDVIGIDDVPEQLLDGPRVEGGGGGGYDLTGRSLQEVERDLIAANLSLVEGNRQKAAQMLGIGERTLYRKLKEYGL 460          
BLAST of mRNA_M-pyrifera_M_contig86829.20192.1 vs. uniprot
Match: A0A2D5AZU6_9BACT (Sigma-54-dependent Fis family transcriptional regulator n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A2D5AZU6_9BACT)

HSP 1 Score: 335 bits (860), Expect = 7.310e-111
Identity = 170/261 (65.13%), Postives = 208/261 (79.69%), Query Frame = 1
Query:    1 FVAPNCAAMNESLIESELFGHVKGAFTGALTAKEGLFAAADGGTLFLDEIGDMPLGLQAKLLRVIETREVVPVGGNQPRKVDIRLVAATNQNLEEMVAAGTFREDLLFRLKVVSIELPALKDRPGDVPLLVDHFIHQFAEEHGRPIEGIDAEARTALMRHAWPGNVRELRNTIENMVLLSRENVLSLDDVPESIRATQNATTTGPA------ALAGRSLEEVERDLIQANLDFVDGNRAKAAKILGIGERTLYRKIKEYGL 765
            FV  NCAA+++ LIESELFGH+KGAFTGA+++KEG+   A GGTLFLDE+GDM L  QAKLLRV+E+REV  VGGN  RKVD+R+VAATN++L+EMV  GTFR DLLFRL+VV++ELP L++R GD+PLL+DHF+   A+EHGR I GI  EAR  LMR++WPGNVRELRN IENMVLL+R  VL+++DVP+ ++ +    T GP        LAGRSL +VERDLI ANL    GNR KAAK++GIGERTLYRKIKEYGL
Sbjct:  196 FVPVNCAALSQGLIESELFGHIKGAFTGAVSSKEGMLVYAHGGTLFLDEVGDMALETQAKLLRVLESREVQAVGGNAARKVDVRVVAATNRDLQEMVGEGTFRGDLLFRLQVVTVELPPLRERSGDIPLLIDHFLGDLAQEHGRDIRGIAPEARATLMRYSWPGNVRELRNVIENMVLLARTEVLTVEDVPDRVQGS----TAGPGHGQGHYELAGRSLADVERDLIGANLMLAAGNRQKAAKLIGIGERTLYRKIKEYGL 452          
BLAST of mRNA_M-pyrifera_M_contig86829.20192.1 vs. uniprot
Match: A0A7Y4SS45_9BACT (Sigma-54-dependent Fis family transcriptional regulator n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A7Y4SS45_9BACT)

HSP 1 Score: 336 bits (861), Expect = 8.970e-111
Identity = 170/257 (66.15%), Postives = 207/257 (80.54%), Query Frame = 1
Query:    1 FVAPNCAAMNESLIESELFGHVKGAFTGALTAKEGLFAAADGGTLFLDEIGDMPLGLQAKLLRVIETREVVPVGGNQPRKVDIRLVAATNQNLEEMVAAGTFREDLLFRLKVVSIELPALKDRPGDVPLLVDHFIHQFAEEHGRPIEGIDAEARTALMRHAWPGNVRELRNTIENMVLLSRENVLSLDDVPESIR-AT-QNATTTGPAALAGRSLEEVERDLIQANLDFVDGNRAKAAKILGIGERTLYRKIKEYGL 765
            FVA NCAA+++ LIESELFGHVKGAFTGA++AKEG+   A+GGTLFLDE+GDMPL  QAKLLRV+E REV PVGGN PRKVD+RLVAATN++L  +V+ G FREDLLFRL+VV+I LP L +RPGDVPLL+DHF+   A+EHGR + GI  EAR  L+R+ WPGNVRELRN +E MVLL+R++VL ++D+PE I+ AT Q     G   LAGR+L EVERDLI + L   + NR KAAK++GIGERTLYRK+ EYGL
Sbjct:  215 FVAVNCAALSQGLIESELFGHVKGAFTGAISAKEGMLVYAEGGTLFLDEVGDMPLETQAKLLRVLEMREVQPVGGNAPRKVDVRLVAATNRDLRTLVSEGKFREDLLFRLQVVTIHLPPLCERPGDVPLLIDHFVSALAKEHGRAVRGITPEARALLVRYDWPGNVRELRNALETMVLLTRQDVLGVEDIPEHIQHATGQPGKARGHYELAGRTLAEVERDLIASTLKLTEENRHKAAKLMGIGERTLYRKLHEYGL 471          
BLAST of mRNA_M-pyrifera_M_contig86829.20192.1 vs. uniprot
Match: A0A7C8CTH5_9BACT (Sigma-54-dependent Fis family transcriptional regulator n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A7C8CTH5_9BACT)

HSP 1 Score: 330 bits (845), Expect = 1.400e-108
Identity = 173/257 (67.32%), Postives = 200/257 (77.82%), Query Frame = 1
Query:    1 FVAPNCAAMNESLIESELFGHVKGAFTGALTAKEGLFAAADGGTLFLDEIGDMPLGLQAKLLRVIETREVVPVGGNQPRKVDIRLVAATNQNLEEMVAAGTFREDLLFRLKVVSIELPALKDRPGDVPLLVDHFIHQFAEEHGRPIEGIDAEARTALMRHAWPGNVRELRNTIENMVLLSRENVLSLDDVPESIRATQNATTTGPA--ALAGRSLEEVERDLIQANLDFVDGNRAKAAKILGIGERTLYRKIKEYGL 765
            FVA NCAA++E LIESELFGHVKGAFTGAL AKEG    A+GGTLFLDE+GDMPL  QAKLLRV+E REVVPVGGNQ   VDIRLVAATN++L+ MVA+G FREDL FRL+VV++ELP L++R GD+PLLVDHF+ +F+  H R I GI  EART L+R++WPGNVRELRN IENMV+L+    LSL DVP  +    N      A  ALAGRSL EVERDLI  NL   +GNR + AK+LGIGERTLYRKIK Y L
Sbjct:  198 FVAVNCAALSEGLIESELFGHVKGAFTGALGAKEGRVVYANGGTLFLDEVGDMPLDTQAKLLRVLEAREVVPVGGNQSVAVDIRLVAATNRDLQAMVASGEFREDLFFRLQVVTVELPPLRERSGDIPLLVDHFLQEFSATHKREISGIAPEARTRLVRYSWPGNVRELRNCIENMVVLAGSTTLSLADVPAQVVDGANGPAREGAEYALAGRSLAEVERDLIAQNLALFEGNREQTAKLLGIGERTLYRKIKAYDL 454          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig86829.20192.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2D5W562_9BACT4.490e-11970.16Sigma-54-dependent Fis family transcriptional regu... [more]
A0A7C2B284_9BACT4.430e-11769.26Sigma-54-dependent Fis family transcriptional regu... [more]
A0A518CZW5_9BACT8.710e-11669.14DNA-binding transcriptional response regulator n=1... [more]
A0A2D6HE59_9BACT1.590e-11567.83Sigma-54-dependent Fis family transcriptional regu... [more]
A0A800G3C0_9BACT7.500e-11565.88Sigma-54-dependent Fis family transcriptional regu... [more]
A0A2D5XQ80_9BACT4.410e-11466.67Sigma-54-dependent Fis family transcriptional regu... [more]
A0A518BJN9_9BACT3.560e-11365.37DNA-binding transcriptional response regulator n=1... [more]
A0A2D5AZU6_9BACT7.310e-11165.13Sigma-54-dependent Fis family transcriptional regu... [more]
A0A7Y4SS45_9BACT8.970e-11166.15Sigma-54-dependent Fis family transcriptional regu... [more]
A0A7C8CTH5_9BACT1.400e-10867.32Sigma-54-dependent Fis family transcriptional regu... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig86829contigM-pyrifera_M_contig86829:5..772 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score270.4
Seed ortholog evalue8.4e-70
Seed eggNOG ortholog886293.Sinac_2631
KEGG koko:K07713
KEGG Pathwayko02020,map02020
KEGG ModuleM00499
Hectar predicted targeting categoryother localisation
EggNOG free text desc.COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains
EggNOG OGs2IWYY@203682,COG2204@1,COG2204@2
COG Functional cat.T
Best tax levelPlanctomycetes
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko02022
Exons1
Model size768
Cds size744
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816777.5598538-UTR-M-pyrifera_M_contig86829:4..281622816777.5598538-UTR-M-pyrifera_M_contig86829:4..28Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig86829 5..28 +
1692278172.5399191-UTR-M-pyrifera_M_contig86829:4..281692278172.5399191-UTR-M-pyrifera_M_contig86829:4..28Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig86829 5..28 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816777.571384-CDS-M-pyrifera_M_contig86829:28..7721622816777.571384-CDS-M-pyrifera_M_contig86829:28..772Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig86829 29..772 +
1692278172.5556643-CDS-M-pyrifera_M_contig86829:28..7721692278172.5556643-CDS-M-pyrifera_M_contig86829:28..772Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig86829 29..772 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig86829.20192.1prot_M-pyrifera_M_contig86829.20192.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig86829 29..772 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig86829.20192.1

>prot_M-pyrifera_M_contig86829.20192.1 ID=prot_M-pyrifera_M_contig86829.20192.1|Name=mRNA_M-pyrifera_M_contig86829.20192.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=248bp
MNESLIESELFGHVKGAFTGALTAKEGLFAAADGGTLFLDEIGDMPLGLQ
AKLLRVIETREVVPVGGNQPRKVDIRLVAATNQNLEEMVAAGTFREDLLF
RLKVVSIELPALKDRPGDVPLLVDHFIHQFAEEHGRPIEGIDAEARTALM
RHAWPGNVRELRNTIENMVLLSRENVLSLDDVPESIRATQNATTTGPAAL
AGRSLEEVERDLIQANLDFVDGNRAKAAKILGIGERTLYRKIKEYGL*
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mRNA from alignment at M-pyrifera_M_contig86829:5..772+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig86829.20192.1 ID=mRNA_M-pyrifera_M_contig86829.20192.1|Name=mRNA_M-pyrifera_M_contig86829.20192.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=768bp|location=Sequence derived from alignment at M-pyrifera_M_contig86829:5..772+ (Macrocystis pyrifera P11B4 male)
TTCGTCGCGCCGAACTGCGCGGCGATGAACGAGAGCCTGATCGAGTCCGA GTTGTTCGGCCACGTCAAGGGCGCCTTCACGGGCGCGCTGACCGCCAAGG AAGGCCTGTTTGCCGCCGCCGATGGCGGCACCCTGTTCCTCGACGAGATC GGCGACATGCCGCTCGGCCTGCAGGCCAAACTGCTGCGCGTGATCGAGAC CCGCGAAGTGGTGCCGGTCGGCGGCAACCAGCCGCGCAAGGTCGACATCC GGCTGGTCGCCGCCACGAACCAGAACCTCGAGGAGATGGTCGCCGCGGGC ACGTTCCGCGAGGACCTGCTGTTCCGCCTCAAGGTCGTGTCGATCGAGCT GCCCGCGCTCAAGGACCGCCCCGGCGACGTGCCGCTCCTGGTCGACCACT TCATCCACCAGTTCGCCGAGGAGCACGGCCGCCCGATCGAAGGCATCGAC GCCGAAGCGCGCACCGCCCTGATGCGCCACGCCTGGCCCGGCAACGTCCG CGAGCTGCGCAACACGATCGAGAACATGGTGCTCCTGAGCCGCGAGAACG TGCTCTCGCTGGACGACGTCCCCGAATCGATCCGCGCCACCCAGAACGCC ACGACCACCGGCCCCGCCGCCCTCGCCGGCCGCAGCCTCGAGGAGGTCGA GCGCGACCTGATCCAGGCCAACCTCGACTTCGTGGACGGCAACCGCGCCA AGGCCGCCAAGATCCTGGGCATCGGGGAGCGCACGCTCTACCGCAAGATC AAGGAGTACGGGCTCTAA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig86829:5..772+

>mRNA_M-pyrifera_M_contig86829.20192.1 ID=mRNA_M-pyrifera_M_contig86829.20192.1|Name=mRNA_M-pyrifera_M_contig86829.20192.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1488bp|location=Sequence derived from alignment at M-pyrifera_M_contig86829:5..772+ (Macrocystis pyrifera P11B4 male)
ATGAACGAGAGCCTGATCGAGTCCGAGTTGTTCGGCCACGTCAAGGGCGC
CTTCACGGGCGCGCTGACCGCCAAGGAAGGCCTGTTTGCCGCCGCCGATG
GCGGCACCCTGTTCCTCGACGAGATCGGCGACATGCCGCTCGGCCTGCAG
GCCAAACTGCTGCGCGTGATCGAGACCCGCGAAGTGGTGCCGGTCGGCGG
CAACCAGCCGCGCAAGGTCGACATCCGGCTGGTCGCCGCCACGAACCAGA
ACCTCGAGGAGATGGTCGCCGCGGGCACGTTCCGCGAGGACCTGCTGTTC
CGCCTCAAGGTCGTGTCGATCGAGCTGCCCGCGCTCAAGGACCGCCCCGG
CGACGTGCCGCTCCTGGTCGACCACTTCATCCACCAGTTCGCCGAGGAGC
ACGGCCGCCCGATCGAAGGCATCGACGCCGAAGCGCGCACCGCCCTGATG
CGCCACGCCTGGCCCGGCAACGTCCGCGAGCTGCGCAACACGATCGAGAA
CATGGTGCTCCTGAGCCGCGAGAACGTGCTCTCGCTGGACGACGTCCCCG
AATCGATCCGCGCCACCCAGAACGCCACGACCACCGGCCCCGCCGCCCTC
GCCGGCCGCAGCCTCGAGGAGGTCGAGCGCGACCTGATCCAGGCCAACCT
CGACTTCGTGGACGGCAACCGCGCCAAGGCCGCCAAGATCCTGGGCATCG
GGGAGCGCACGCTCTACCGCAAGATCAAGGAGTACGGGCTCTAAATGAAC
GAGAGCCTGATCGAGTCCGAGTTGTTCGGCCACGTCAAGGGCGCCTTCAC
GGGCGCGCTGACCGCCAAGGAAGGCCTGTTTGCCGCCGCCGATGGCGGCA
CCCTGTTCCTCGACGAGATCGGCGACATGCCGCTCGGCCTGCAGGCCAAA
CTGCTGCGCGTGATCGAGACCCGCGAAGTGGTGCCGGTCGGCGGCAACCA
GCCGCGCAAGGTCGACATCCGGCTGGTCGCCGCCACGAACCAGAACCTCG
AGGAGATGGTCGCCGCGGGCACGTTCCGCGAGGACCTGCTGTTCCGCCTC
AAGGTCGTGTCGATCGAGCTGCCCGCGCTCAAGGACCGCCCCGGCGACGT
GCCGCTCCTGGTCGACCACTTCATCCACCAGTTCGCCGAGGAGCACGGCC
GCCCGATCGAAGGCATCGACGCCGAAGCGCGCACCGCCCTGATGCGCCAC
GCCTGGCCCGGCAACGTCCGCGAGCTGCGCAACACGATCGAGAACATGGT
GCTCCTGAGCCGCGAGAACGTGCTCTCGCTGGACGACGTCCCCGAATCGA
TCCGCGCCACCCAGAACGCCACGACCACCGGCCCCGCCGCCCTCGCCGGC
CGCAGCCTCGAGGAGGTCGAGCGCGACCTGATCCAGGCCAACCTCGACTT
CGTGGACGGCAACCGCGCCAAGGCCGCCAAGATCCTGGGCATCGGGGAGC
GCACGCTCTACCGCAAGATCAAGGAGTACGGGCTCTAA
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