mRNA_M-pyrifera_M_contig86829.20192.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig86829.20192.1 vs. uniprot
Match: A0A2D5W562_9BACT (Sigma-54-dependent Fis family transcriptional regulator n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A2D5W562_9BACT) HSP 1 Score: 357 bits (915), Expect = 4.490e-119 Identity = 181/258 (70.16%), Postives = 211/258 (81.78%), Query Frame = 1 Query: 1 FVAPNCAAMNESLIESELFGHVKGAFTGALTAKEGLFAAADGGTLFLDEIGDMPLGLQAKLLRVIETREVVPVGGNQPRKVDIRLVAATNQNLEEMVAAGTFREDLLFRLKVVSIELPALKDRPGDVPLLVDHFIHQFAEEHGRPIEGIDAEARTALMRHAWPGNVRELRNTIENMVLLSRENVLSLDDVPESIRATQNATTT---GPAALAGRSLEEVERDLIQANLDFVDGNRAKAAKILGIGERTLYRKIKEYGL 765 FVA NCAAM+E LIESELFGHVKGAFTGA +AKEG A ADGGTLFLDE+GDMPL QAKLLRV+ETREV PVGGN+ R VDIRLVAAT+++L MV AGTFREDLLFRL+VV++ LP L++R GDVPLL++HF+ + AE+HGRP+ GI EART L+R+ WPGNVRELRN +ENMVLL+ VL+ +DVP +IR A + G A LAGRSL EVERDLI ANL ++GNR K AK+LGIGERTLYRKIKEYGL Sbjct: 204 FVAVNCAAMSEGLIESELFGHVKGAFTGAASAKEGRLAYADGGTLFLDEVGDMPLSTQAKLLRVLETREVTPVGGNKTRSVDIRLVAATHRDLSAMVTAGTFREDLLFRLQVVTLALPPLRERAGDVPLLLEHFLREMAEQHGRPVRGITPEARTRLVRYDWPGNVRELRNAVENMVLLAAGEVLTEEDVPAAIREASGAPASPGPGQATLAGRSLAEVERDLIAANLSLMEGNREKTAKLLGIGERTLYRKIKEYGL 461
BLAST of mRNA_M-pyrifera_M_contig86829.20192.1 vs. uniprot
Match: A0A7C2B284_9BACT (Sigma-54-dependent Fis family transcriptional regulator n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A7C2B284_9BACT) HSP 1 Score: 352 bits (902), Expect = 4.430e-117 Identity = 178/257 (69.26%), Postives = 208/257 (80.93%), Query Frame = 1 Query: 1 FVAPNCAAMNESLIESELFGHVKGAFTGALTAKEGLFAAADGGTLFLDEIGDMPLGLQAKLLRVIETREVVPVGGNQPRKVDIRLVAATNQNLEEMVAAGTFREDLLFRLKVVSIELPALKDRPGDVPLLVDHFIHQFAEEHGRPIEGIDAEARTALMRHAWPGNVRELRNTIENMVLLSRENVLSLDDVPESIRAT--QNATTTGPAALAGRSLEEVERDLIQANLDFVDGNRAKAAKILGIGERTLYRKIKEYGL 765 FVA NCAA+++ LIESELFGHVKGAFTGA+ AKEG+ ADGGTLFLDE+GDMPL QAKLLRV+ETREV PVGG+Q R VDIRLVAATNQ L E V G FREDLLFRL+VV+IELP L++R GDVPLL+DHFIH AEEHGR + GI EAR AL+R+ WPGNVRELRN IENMV+L+ +L LDDVPE IR+ + G LAGR+L+EVERDLI+ANL +GNR +AAK+ G+GERTLYRK+KEYG+ Sbjct: 206 FVAVNCAALSQGLIESELFGHVKGAFTGAVGAKEGMIVHADGGTLFLDEVGDMPLETQAKLLRVLETREVQPVGGSQVRPVDIRLVAATNQPLRERVEEGKFREDLLFRLQVVTIELPPLRERSGDVPLLIDHFIHTLAEEHGRDVTGITPEARAALVRYDWPGNVRELRNAIENMVVLTSGQLLDLDDVPEHIRSAGGERRANAGGYELAGRTLQEVERDLIEANLALAEGNRQRAAKLTGVGERTLYRKLKEYGI 462
BLAST of mRNA_M-pyrifera_M_contig86829.20192.1 vs. uniprot
Match: A0A518CZW5_9BACT (DNA-binding transcriptional response regulator n=1 Tax=Planctomycetes bacterium Pla163 TaxID=2528008 RepID=A0A518CZW5_9BACT) HSP 1 Score: 348 bits (893), Expect = 8.710e-116 Identity = 177/256 (69.14%), Postives = 206/256 (80.47%), Query Frame = 1 Query: 1 FVAPNCAAMNESLIESELFGHVKGAFTGALTAKEGLFAAADGGTLFLDEIGDMPLGLQAKLLRVIETREVVPVGGNQPRKVDIRLVAATNQNLEEMVAAGTFREDLLFRLKVVSIELPALKDRPGDVPLLVDHFIHQFAEEHGRPIEGIDAEARTALMRHAWPGNVRELRNTIENMVLLSRENVLSLDDVPESIR-ATQNATTTGPAALAGRSLEEVERDLIQANLDFVDGNRAKAAKILGIGERTLYRKIKEYGL 765 FVA NCAA++E LIESELFGHVKGAFTGA A EG ADGGTLFLDE+GDMPL QAKLLR +E REV PVGGNQ +KVDIRLVAATNQ LEE V AG FREDLL+RLKVV+++LP L++R GD+PLLVDHF+ + + HGR I GI +AR LM + WPGNVRELRN +ENMVLL+R +V+ +DDVPE IR A + G +LAGRSL+EVER+LI+ANL F +GNR KAA ILGIGERTLYRKI+EYGL Sbjct: 203 FVAMNCAALSEGLIESELFGHVKGAFTGAFAASEGRMVYADGGTLFLDEVGDMPLDTQAKLLRALELREVQPVGGNQVKKVDIRLVAATNQRLEERVKAGKFREDLLYRLKVVTLDLPPLRERAGDIPLLVDHFLVELTKAHGREIRGITPKARAVLMGYGWPGNVRELRNAVENMVLLARSDVIDVDDVPEPIRSAPRTPAGGGTESLAGRSLKEVERELIEANLAFAEGNRQKAAGILGIGERTLYRKIREYGL 458
BLAST of mRNA_M-pyrifera_M_contig86829.20192.1 vs. uniprot
Match: A0A2D6HE59_9BACT (Sigma-54-dependent Fis family transcriptional regulator n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A2D6HE59_9BACT) HSP 1 Score: 347 bits (891), Expect = 1.590e-115 Identity = 175/258 (67.83%), Postives = 210/258 (81.40%), Query Frame = 1 Query: 1 FVAPNCAAMNESLIESELFGHVKGAFTGALTAKEGLFAAADGGTLFLDEIGDMPLGLQAKLLRVIETREVVPVGGNQPRKVDIRLVAATNQNLEEMVAAGTFREDLLFRLKVVSIELPALKDRPGDVPLLVDHFIHQFAEEHGRPIEGIDAEARTALMRHAWPGNVRELRNTIENMVLLSRENVLSLDDVPESIRATQNATTTGPA---ALAGRSLEEVERDLIQANLDFVDGNRAKAAKILGIGERTLYRKIKEYGL 765 FVA NCAAM+E LIESELFGHVKGAFTGA+ KEG ADGGTLFLDE+GDMPL QAKLLRV+ETREVVPVGGN+ RKVDIRLVAATN++LE MV G+FREDLLFRL+V++++LPAL++RPGDVPLL+DHFI + EEHGR + I EAR L+RHAWPGNVRELRN IENMV+L+ +VL + D+P + +N+ G A ALAGRSL EVER LI+ NL ++GNR K A++LG+GERTLYRK++EYGL Sbjct: 199 FVAVNCAAMSEGLIESELFGHVKGAFTGAIAGKEGRIVYADGGTLFLDEVGDMPLETQAKLLRVLETREVVPVGGNEQRKVDIRLVAATNRDLETMVTEGSFREDLLFRLRVIAVDLPALRERPGDVPLLIDHFIGELNEEHGRSVRAITPEARAILVRHAWPGNVRELRNAIENMVVLAGGDVLDVGDLPHGLE--ENSAQRGGAGGYALAGRSLAEVERALIEENLALMEGNREKTARVLGMGERTLYRKLREYGL 454
BLAST of mRNA_M-pyrifera_M_contig86829.20192.1 vs. uniprot
Match: A0A800G3C0_9BACT (Sigma-54-dependent Fis family transcriptional regulator n=2 Tax=cellular organisms TaxID=131567 RepID=A0A800G3C0_9BACT) HSP 1 Score: 346 bits (887), Expect = 7.500e-115 Identity = 168/255 (65.88%), Postives = 207/255 (81.18%), Query Frame = 1 Query: 1 FVAPNCAAMNESLIESELFGHVKGAFTGALTAKEGLFAAADGGTLFLDEIGDMPLGLQAKLLRVIETREVVPVGGNQPRKVDIRLVAATNQNLEEMVAAGTFREDLLFRLKVVSIELPALKDRPGDVPLLVDHFIHQFAEEHGRPIEGIDAEARTALMRHAWPGNVRELRNTIENMVLLSRENVLSLDDVPESIRATQNATTTGPAALAGRSLEEVERDLIQANLDFVDGNRAKAAKILGIGERTLYRKIKEYGL 765 FVA NCAA++E LIESELFGHVKGAFTGA+ K+G A ADGGTLFLDE+GDMPL QAKLLRV+E REV VGG+ P KVDIRLVAATN++L MV A FR+DLLFRL+VV++ELP L+DRPGD+PLL+DHF+ + +E+HGR I G+ EAR L R+ WPGNVRELRN +ENMVLL R+ + L+D+P +R + + G LAGRSL+EVE++LI+ NLD +DGNRA+AA++LGIGERTLYRK+KEYGL Sbjct: 206 FVAVNCAALSEGLIESELFGHVKGAFTGAIGEKKGQVAHADGGTLFLDEVGDMPLATQAKLLRVLEEREVTKVGGHDPEKVDIRLVAATNRDLPAMVEASEFRQDLLFRLQVVTLELPPLRDRPGDLPLLLDHFVSELSEQHGRTITGMSPEARAVLSRYPWPGNVRELRNAVENMVLLCRDGSIGLEDLPVGVRGGDDQASGGSVVLAGRSLQEVEKELIRVNLDLMDGNRAQAAEVLGIGERTLYRKLKEYGL 460
BLAST of mRNA_M-pyrifera_M_contig86829.20192.1 vs. uniprot
Match: A0A2D5XQ80_9BACT (Sigma-54-dependent Fis family transcriptional regulator n=2 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A2D5XQ80_9BACT) HSP 1 Score: 344 bits (882), Expect = 4.410e-114 Identity = 170/255 (66.67%), Postives = 208/255 (81.57%), Query Frame = 1 Query: 1 FVAPNCAAMNESLIESELFGHVKGAFTGALTAKEGLFAAADGGTLFLDEIGDMPLGLQAKLLRVIETREVVPVGGNQPRKVDIRLVAATNQNLEEMVAAGTFREDLLFRLKVVSIELPALKDRPGDVPLLVDHFIHQFAEEHGRPIEGIDAEARTALMRHAWPGNVRELRNTIENMVLLSRENVLSLDDVPESIRATQNATTTGPAALAGRSLEEVERDLIQANLDFVDGNRAKAAKILGIGERTLYRKIKEYGL 765 FVA NCAAM+E LIESELFGH +GAFTGA+ K+G A ADGGTLFLDE+GDMPL QAKLLRV+E+REVV VGG++P+KVDIRLVAATN++L MVA GTFREDLLFRL+VVSI+LP L+DR GD+PLL+++F+ A EHGRP+ GI AEAR L RH WPGNVRELRN +ENMVLL++ L ++D+PE++ A + G LAGRSL E+E+ LI+ANL+ ++ NR + AK+LGIGERTLYRKIKEYGL Sbjct: 206 FVAVNCAAMSEGLIESELFGHKRGAFTGAVAEKQGRIAYADGGTLFLDEVGDMPLETQAKLLRVLESREVVQVGGHEPKKVDIRLVAATNRDLRSMVAEGTFREDLLFRLQVVSIDLPPLRDRVGDLPLLLEYFVRTLAAEHGRPVTGISAEARAVLARHDWPGNVRELRNAVENMVLLAQGETLQIEDLPETVLAGDGKSRGGQLDLAGRSLAEMEQALIKANLELMEDNRERTAKVLGIGERTLYRKIKEYGL 460
BLAST of mRNA_M-pyrifera_M_contig86829.20192.1 vs. uniprot
Match: A0A518BJN9_9BACT (DNA-binding transcriptional response regulator n=1 Tax=Planctomycetes bacterium Pla133 TaxID=2528011 RepID=A0A518BJN9_9BACT) HSP 1 Score: 342 bits (876), Expect = 3.560e-113 Identity = 168/257 (65.37%), Postives = 207/257 (80.54%), Query Frame = 1 Query: 1 FVAPNCAAMNESLIESELFGHVKGAFTGALTAKEGLFAAADGGTLFLDEIGDMPLGLQAKLLRVIETREVVPVGGNQPRKVDIRLVAATNQNLEEMVAAGTFREDLLFRLKVVSIELPALKDRPGDVPLLVDHFIHQFAEEHGRPIEGIDAEARTALMRHAWPGNVRELRNTIENMVLLSRENVLSLDDVPESIRATQNATTTGPAA--LAGRSLEEVERDLIQANLDFVDGNRAKAAKILGIGERTLYRKIKEYGL 765 FVA NCAA++E LIESELFGHVKG+FTGA+T EG ADGGTLFLDE+GDMPL QAKLLRV+ETREV PVGGN +KVDIRL+AATN +L ++V+ G FREDLL+RL+VV+++LP L++R GDVPLL+DH++H+ + +HGR + GI EAR L+R+AWPGNVRELRN +ENMVLL+R +V+ +DDVPE + G L GRSL+EVERDLI ANL V+GNR KAA++LGIGERTLYRK+KEYGL Sbjct: 204 FVAMNCAALSEGLIESELFGHVKGSFTGAVTHNEGRMVYADGGTLFLDEVGDMPLDTQAKLLRVLETREVQPVGGNTTKKVDIRLLAATNHDLRDLVSKGKFREDLLYRLQVVTVDLPPLRERVGDVPLLLDHYVHELSAQHGREVRGITPEARAVLVRYAWPGNVRELRNVVENMVLLTRSDVIGIDDVPEQLLDGPRVEGGGGGGYDLTGRSLQEVERDLIAANLSLVEGNRQKAAQMLGIGERTLYRKLKEYGL 460
BLAST of mRNA_M-pyrifera_M_contig86829.20192.1 vs. uniprot
Match: A0A2D5AZU6_9BACT (Sigma-54-dependent Fis family transcriptional regulator n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A2D5AZU6_9BACT) HSP 1 Score: 335 bits (860), Expect = 7.310e-111 Identity = 170/261 (65.13%), Postives = 208/261 (79.69%), Query Frame = 1 Query: 1 FVAPNCAAMNESLIESELFGHVKGAFTGALTAKEGLFAAADGGTLFLDEIGDMPLGLQAKLLRVIETREVVPVGGNQPRKVDIRLVAATNQNLEEMVAAGTFREDLLFRLKVVSIELPALKDRPGDVPLLVDHFIHQFAEEHGRPIEGIDAEARTALMRHAWPGNVRELRNTIENMVLLSRENVLSLDDVPESIRATQNATTTGPA------ALAGRSLEEVERDLIQANLDFVDGNRAKAAKILGIGERTLYRKIKEYGL 765 FV NCAA+++ LIESELFGH+KGAFTGA+++KEG+ A GGTLFLDE+GDM L QAKLLRV+E+REV VGGN RKVD+R+VAATN++L+EMV GTFR DLLFRL+VV++ELP L++R GD+PLL+DHF+ A+EHGR I GI EAR LMR++WPGNVRELRN IENMVLL+R VL+++DVP+ ++ + T GP LAGRSL +VERDLI ANL GNR KAAK++GIGERTLYRKIKEYGL Sbjct: 196 FVPVNCAALSQGLIESELFGHIKGAFTGAVSSKEGMLVYAHGGTLFLDEVGDMALETQAKLLRVLESREVQAVGGNAARKVDVRVVAATNRDLQEMVGEGTFRGDLLFRLQVVTVELPPLRERSGDIPLLIDHFLGDLAQEHGRDIRGIAPEARATLMRYSWPGNVRELRNVIENMVLLARTEVLTVEDVPDRVQGS----TAGPGHGQGHYELAGRSLADVERDLIGANLMLAAGNRQKAAKLIGIGERTLYRKIKEYGL 452
BLAST of mRNA_M-pyrifera_M_contig86829.20192.1 vs. uniprot
Match: A0A7Y4SS45_9BACT (Sigma-54-dependent Fis family transcriptional regulator n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A7Y4SS45_9BACT) HSP 1 Score: 336 bits (861), Expect = 8.970e-111 Identity = 170/257 (66.15%), Postives = 207/257 (80.54%), Query Frame = 1 Query: 1 FVAPNCAAMNESLIESELFGHVKGAFTGALTAKEGLFAAADGGTLFLDEIGDMPLGLQAKLLRVIETREVVPVGGNQPRKVDIRLVAATNQNLEEMVAAGTFREDLLFRLKVVSIELPALKDRPGDVPLLVDHFIHQFAEEHGRPIEGIDAEARTALMRHAWPGNVRELRNTIENMVLLSRENVLSLDDVPESIR-AT-QNATTTGPAALAGRSLEEVERDLIQANLDFVDGNRAKAAKILGIGERTLYRKIKEYGL 765 FVA NCAA+++ LIESELFGHVKGAFTGA++AKEG+ A+GGTLFLDE+GDMPL QAKLLRV+E REV PVGGN PRKVD+RLVAATN++L +V+ G FREDLLFRL+VV+I LP L +RPGDVPLL+DHF+ A+EHGR + GI EAR L+R+ WPGNVRELRN +E MVLL+R++VL ++D+PE I+ AT Q G LAGR+L EVERDLI + L + NR KAAK++GIGERTLYRK+ EYGL Sbjct: 215 FVAVNCAALSQGLIESELFGHVKGAFTGAISAKEGMLVYAEGGTLFLDEVGDMPLETQAKLLRVLEMREVQPVGGNAPRKVDVRLVAATNRDLRTLVSEGKFREDLLFRLQVVTIHLPPLCERPGDVPLLIDHFVSALAKEHGRAVRGITPEARALLVRYDWPGNVRELRNALETMVLLTRQDVLGVEDIPEHIQHATGQPGKARGHYELAGRTLAEVERDLIASTLKLTEENRHKAAKLMGIGERTLYRKLHEYGL 471
BLAST of mRNA_M-pyrifera_M_contig86829.20192.1 vs. uniprot
Match: A0A7C8CTH5_9BACT (Sigma-54-dependent Fis family transcriptional regulator n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A7C8CTH5_9BACT) HSP 1 Score: 330 bits (845), Expect = 1.400e-108 Identity = 173/257 (67.32%), Postives = 200/257 (77.82%), Query Frame = 1 Query: 1 FVAPNCAAMNESLIESELFGHVKGAFTGALTAKEGLFAAADGGTLFLDEIGDMPLGLQAKLLRVIETREVVPVGGNQPRKVDIRLVAATNQNLEEMVAAGTFREDLLFRLKVVSIELPALKDRPGDVPLLVDHFIHQFAEEHGRPIEGIDAEARTALMRHAWPGNVRELRNTIENMVLLSRENVLSLDDVPESIRATQNATTTGPA--ALAGRSLEEVERDLIQANLDFVDGNRAKAAKILGIGERTLYRKIKEYGL 765 FVA NCAA++E LIESELFGHVKGAFTGAL AKEG A+GGTLFLDE+GDMPL QAKLLRV+E REVVPVGGNQ VDIRLVAATN++L+ MVA+G FREDL FRL+VV++ELP L++R GD+PLLVDHF+ +F+ H R I GI EART L+R++WPGNVRELRN IENMV+L+ LSL DVP + N A ALAGRSL EVERDLI NL +GNR + AK+LGIGERTLYRKIK Y L Sbjct: 198 FVAVNCAALSEGLIESELFGHVKGAFTGALGAKEGRVVYANGGTLFLDEVGDMPLDTQAKLLRVLEAREVVPVGGNQSVAVDIRLVAATNRDLQAMVASGEFREDLFFRLQVVTVELPPLRERSGDIPLLVDHFLQEFSATHKREISGIAPEARTRLVRYSWPGNVRELRNCIENMVVLAGSTTLSLADVPAQVVDGANGPAREGAEYALAGRSLAEVERDLIAQNLALFEGNREQTAKLLGIGERTLYRKIKAYDL 454 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig86829.20192.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig86829.20192.1 >prot_M-pyrifera_M_contig86829.20192.1 ID=prot_M-pyrifera_M_contig86829.20192.1|Name=mRNA_M-pyrifera_M_contig86829.20192.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=248bp MNESLIESELFGHVKGAFTGALTAKEGLFAAADGGTLFLDEIGDMPLGLQback to top mRNA from alignment at M-pyrifera_M_contig86829:5..772+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig86829.20192.1 ID=mRNA_M-pyrifera_M_contig86829.20192.1|Name=mRNA_M-pyrifera_M_contig86829.20192.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=768bp|location=Sequence derived from alignment at M-pyrifera_M_contig86829:5..772+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig86829:5..772+ >mRNA_M-pyrifera_M_contig86829.20192.1 ID=mRNA_M-pyrifera_M_contig86829.20192.1|Name=mRNA_M-pyrifera_M_contig86829.20192.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1488bp|location=Sequence derived from alignment at M-pyrifera_M_contig86829:5..772+ (Macrocystis pyrifera P11B4 male)back to top |