mRNA_M-pyrifera_M_contig86693.20163.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig86693.20163.1 vs. uniprot
Match: A0A3C2B185_9ACTN (Uncharacterized protein n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A3C2B185_9ACTN) HSP 1 Score: 104 bits (259), Expect = 5.070e-23 Identity = 61/166 (36.75%), Postives = 91/166 (54.82%), Query Frame = 1 Query: 7 PAAVANHWNHLQTDDQHHRSLLFTQLPRSDVSAIWATRLADQLAGHRTLTTVFTPTSMTDAWHRIETDLTRLDAEADARAKAGFRISARHQRLTAEVQQREHELSDGHAELGINMLLQLTATTLDQLDDQETDARRIAAQAGGTLRRLDGQHNAGMCASIGLARGI 504 P V W H+ DD HRS P+ V + W +RL RT+T V P M A + ++ +A++D + + GFR++AR ++ A+ ++REHELS+GHAE L+ ++A+TLD LDD T + AAQ LR LD +H+ G AS+ L R + Sbjct: 317 PMVVEPDWRHVYVDDAFHRSYRVAGWPQLPVPSDWLSRLLADTHCIRTVTVVMEPVPMGRAARAADREVMAREADSDLKERKGFRVNARERKRLADAERREHELSEGHAEFRFVGLVNVSASTLDDLDDDCTVIEQAAAQCLLDLRPLDARHDQGWVASLPLGRAL 482
BLAST of mRNA_M-pyrifera_M_contig86693.20163.1 vs. uniprot
Match: A0A2E0RV85_9ACTN (Uncharacterized protein n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2E0RV85_9ACTN) HSP 1 Score: 97.8 bits (242), Expect = 1.140e-20 Identity = 56/167 (33.53%), Postives = 91/167 (54.49%), Query Frame = 1 Query: 7 PAAVANHWNHLQTDDQHHRSLLFTQLPRSDVSAIWATRLADQLAGHRTLTTVFTPTSMTDAWHRIETDLTRLDAEADARAKAGFRISARHQRLTAEVQQREHELSDGHAELGINMLLQLTATTLDQLDDQETDARRIAAQAGGTLRRLDGQHNAGMCASIGLARGIA 507 P V W+H++ D HR+ P+ V + W + L RT+T V P ++ A + ++ +A+A+ + + GFR++AR ++ A+V+ RE ELS+GHAE L+ +T+T D LD++ D + AAQ+ LR LD +H G AS+ L R +A Sbjct: 321 PMVVEPEWSHVRVDGALHRTYRVAAWPQLSVGSDWLSPLLTDARATRTVTVVMEPIPISRAARAADREVMSREADAELKERKGFRVNARERKRLADVEARERELSEGHAEFRFVGLVTVTSTDADTLDEECADIEQTAAQSLLDLRPLDARHELGWLASLPLGRSLA 487
BLAST of mRNA_M-pyrifera_M_contig86693.20163.1 vs. uniprot
Match: UPI0003755FB8 (hypothetical protein n=1 Tax=Actinoplanes globisporus TaxID=113565 RepID=UPI0003755FB8) HSP 1 Score: 58.9 bits (141), Expect = 4.450e-7 Identity = 57/179 (31.84%), Postives = 81/179 (45.25%), Query Frame = 1 Query: 1 AQPAAVAN-HWNHLQTDDQHHRSLLFTQLPRSDVSAIWATRLADQLAGHRTLTTVFTPTSMTDAWHRIETDLTRLDAEADARAKAGFRISARHQRL--TAE-------VQQREHELSDGHAELGINMLLQLTATTLDQLDDQETDARRIAAQAGGTLRRLDG-QHNAGMCASIGLARGI 504 A PAA W Q D + R+L Q+PR V A W T L + RT+T V P + L +L + A+AG ++ R RL TA V+Q + E + GH +++ +TA +LD LD RRI ++AG L G Q A A++ LARG+ Sbjct: 313 AGPAAARTVGWTTYQHDSAYSRTLWVAQMPRQPVGATWLTPLYMRTTCRRTVTLVAQP---------VPASLAQLATRREKVARAGDEVTKRKLRLVRTAREDDEARAVEQIDREQAAGHVRYRYALMVTVTAGSLDGLDRDVQQVRRILSRAGCEAVVLAGEQDQAFAAAALPLARGL 482
BLAST of mRNA_M-pyrifera_M_contig86693.20163.1 vs. uniprot
Match: UPI001AD56C7E (Uncharacterized protein n=2 Tax=Actinoplanes toevensis TaxID=571911 RepID=UPI001AD56C7E) HSP 1 Score: 58.5 bits (140), Expect = 6.080e-7 Identity = 53/169 (31.36%), Postives = 76/169 (44.97%), Query Frame = 1 Query: 28 WNHLQTDDQHHRSLLFTQLPRSDVSAIWATRLADQLAGHRTLTTVFTPTSMTDAWHRIETDLTRLDAEADARAKAGFRISARHQRL--TAE-------VQQREHELSDGHAELGINMLLQLTATTLDQLDDQETDARRIAAQAGGTLRRLDG-QHNAGMCASIGLARGI 504 W Q D R+L Q+PR + A W T L + RT+T V P + L +L + A+AG ++ R RL TA V+Q + E + GH +++ +TA TLD LD RRI ++AG L G Q A A++ LARG+ Sbjct: 337 WTTYQHDSAFSRTLWVAQMPRQPIGATWLTPLYMRTTCRRTVTLVAQP---------VPAGLAQLATRKEKVARAGDEVTKRKLRLVRTAREDDEARAVEQIDREQAAGHVRYRYALMVAVTARTLDGLDRDVQQVRRILSRAGCEAVVLAGEQDQAFAAAALPLARGL 496
BLAST of mRNA_M-pyrifera_M_contig86693.20163.1 vs. uniprot
Match: UPI00193C1B21 (hypothetical protein n=1 Tax=Actinoplanes ovalisporus TaxID=2810368 RepID=UPI00193C1B21) HSP 1 Score: 57.0 bits (136), Expect = 2.030e-6 Identity = 49/169 (28.99%), Postives = 75/169 (44.38%), Query Frame = 1 Query: 28 WNHLQTDDQHHRSLLFTQLPRSDVSAIWATRLADQLAGHRTLTTVFTPTSMTDAWHRIETDLTRLDAEADARAKAGFRISARHQRL---------TAEVQQREHELSDGHAELGINMLLQLTATTLDQLDDQETDARRIAAQAGGTLRRLDG-QHNAGMCASIGLARGI 504 W + D R+L Q+PR V A W T L + RT+T V P + + L L D A+AG ++ R RL + V+Q + E + GH +++ +TA TL+ LD +R+ ++AG L G Q A A++ LARG+ Sbjct: 308 WTTYEHDSAFSRTLWVAQMPRQPVDATWLTPLYMRTTCRRTVTLVAQP---------VPSGLAELATRRDKVARAGDEVTKRKLRLVRTAREDAESRAVEQIDREQAAGHVRYRYALMVAVTARTLEGLDQDVHQVKRVLSRAGCEAVVLAGEQDQAFAAAALPLARGL 467 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig86693.20163.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 5
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig86693.20163.1 >prot_M-pyrifera_M_contig86693.20163.1 ID=prot_M-pyrifera_M_contig86693.20163.1|Name=mRNA_M-pyrifera_M_contig86693.20163.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=170bp AQPAAVANHWNHLQTDDQHHRSLLFTQLPRSDVSAIWATRLADQLAGHRTback to top mRNA from alignment at M-pyrifera_M_contig86693:218..727+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig86693.20163.1 ID=mRNA_M-pyrifera_M_contig86693.20163.1|Name=mRNA_M-pyrifera_M_contig86693.20163.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=510bp|location=Sequence derived from alignment at M-pyrifera_M_contig86693:218..727+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig86693:218..727+ >mRNA_M-pyrifera_M_contig86693.20163.1 ID=mRNA_M-pyrifera_M_contig86693.20163.1|Name=mRNA_M-pyrifera_M_contig86693.20163.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1020bp|location=Sequence derived from alignment at M-pyrifera_M_contig86693:218..727+ (Macrocystis pyrifera P11B4 male)back to top |