mRNA_M-pyrifera_M_contig86588.20147.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig86588.20147.1 vs. uniprot
Match: A0A0V0RCP1_9BILA (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic n=2 Tax=Eukaryota TaxID=2759 RepID=A0A0V0RCP1_9BILA) HSP 1 Score: 189 bits (480), Expect = 4.200e-59 Identity = 100/147 (68.03%), Postives = 120/147 (81.63%), Query Frame = 1 Query: 1 TVDAASAKDLRAGRAASGNIIPASTGAAKAVGKVIPEVAGKLTGMAFRVPTLDVSVVDLTVRLAKGASSDDIVAAIKQVSEGSMKGVMTWTDEPAVSSDFTGSTYSCIFDVTAGIALNDNFHKLIAFYDNEFGYSCRLVDLALHISK 441 TVD SAKD R GRAAS NIIP+STGAAKAVGKV+P + GKLTGMAFRVPT+DVSVVDLTVRL K A+ D I AAIK+ SEG MKG++ +T++ VS+DF G S IFD AGIALNDNF KL+++YDNE+GYS R++DL +HI+K Sbjct: 13 TVDGPSAKDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMAFRVPTVDVSVVDLTVRLEKKATYDQIKAAIKEESEGKMKGILGYTEDDVVSTDFIGDNRSSIFDAKAGIALNDNFVKLVSWYDNEWGYSSRVIDLIVHIAK 159
BLAST of mRNA_M-pyrifera_M_contig86588.20147.1 vs. uniprot
Match: E9RK94_CABCA (Glyceraldehyde 3-phosphate dehydrogenase (GAPDH) homolog (Fragment) n=1 Tax=Cabomba caroliniana TaxID=4426 RepID=E9RK94_CABCA) HSP 1 Score: 189 bits (481), Expect = 5.990e-59 Identity = 100/145 (68.97%), Postives = 118/145 (81.38%), Query Frame = 1 Query: 1 TVDAASAKDLRAGRAASGNIIPASTGAAKAVGKVIPEVAGKLTGMAFRVPTLDVSVVDLTVRLAKGASSDDIVAAIKQVSEGSMKGVMTWTDEPAVSSDFTGSTYSCIFDVTAGIALNDNFHKLIAFYDNEFGYSCRLVDLALHI 435 TVD S+KD R GRAA NIIP+STGAAKAVGKV+P + GKLTGMAFRVPT+DVSVVDLTVRL KGAS D I AAIK+ SEG +KGV+ +TDE VS+DF G + S IFD AGIALNDNF KL+++YDNE+GYS R++DL H+ Sbjct: 33 TVDGPSSKDWRGGRAAGFNIIPSSTGAAKAVGKVLPALNGKLTGMAFRVPTVDVSVVDLTVRLEKGASYDQIKAAIKEASEGKLKGVLGYTDEDVVSTDFIGDSRSSIFDAKAGIALNDNFVKLVSWYDNEWGYSSRVIDLIKHV 177
BLAST of mRNA_M-pyrifera_M_contig86588.20147.1 vs. uniprot
Match: K3YIG5_SETIT (Glyceraldehyde-3-phosphate dehydrogenase n=7 Tax=Poaceae TaxID=4479 RepID=K3YIG5_SETIT) HSP 1 Score: 194 bits (492), Expect = 1.300e-58 Identity = 104/147 (70.75%), Postives = 121/147 (82.31%), Query Frame = 1 Query: 1 TVDAASAKDLRAGRAASGNIIPASTGAAKAVGKVIPEVAGKLTGMAFRVPTLDVSVVDLTVRLAKGASSDDIVAAIKQVSEGSMKGVMTWTDEPAVSSDFTGSTYSCIFDVTAGIALNDNFHKLIAFYDNEFGYSCRLVDLALHISK 441 TVD SAKD R GRAAS NIIP+STGAAKAVGKV+PE+ GKLTGM+FRVPT+DVSVVDLTVRL KGAS +DI AIK SEG +KG+M +TDE VS+DFTG + S IFD AGIALNDNF KL+++YDNE+GYS R+VDL H+ K Sbjct: 189 TVDGPSAKDWRGGRAASFNIIPSSTGAAKAVGKVLPELNGKLTGMSFRVPTVDVSVVDLTVRLQKGASYEDIKKAIKAASEGPLKGIMGYTDEDLVSTDFTGDSRSSIFDAKAGIALNDNFVKLVSWYDNEWGYSNRVVDLIRHMFK 335
BLAST of mRNA_M-pyrifera_M_contig86588.20147.1 vs. uniprot
Match: B7FL18_MEDTR (Gp_dh_C domain-containing protein n=3 Tax=Pentapetalae TaxID=1437201 RepID=B7FL18_MEDTR) HSP 1 Score: 189 bits (480), Expect = 1.990e-58 Identity = 100/147 (68.03%), Postives = 121/147 (82.31%), Query Frame = 1 Query: 1 TVDAASAKDLRAGRAASGNIIPASTGAAKAVGKVIPEVAGKLTGMAFRVPTLDVSVVDLTVRLAKGASSDDIVAAIKQVSEGSMKGVMTWTDEPAVSSDFTGSTYSCIFDVTAGIALNDNFHKLIAFYDNEFGYSCRLVDLALHISK 441 TVD SAKD R GRAAS NIIP+STGAAKAVGK++P + GKLTGMAFRVPT+DVSVVDLTVRL K A+ D I AAIK+ SEG++KG++ +T++ VS+DF G T S IFD AGIALNDNF KL+++YDNE GYS R+VDL +HI+K Sbjct: 61 TVDGPSAKDWRGGRAASFNIIPSSTGAAKAVGKMLPALNGKLTGMAFRVPTVDVSVVDLTVRLEKPATYDQIKAAIKEESEGNLKGILGYTEDDVVSTDFIGDTRSSIFDAKAGIALNDNFVKLVSWYDNELGYSTRVVDLIVHIAK 207
BLAST of mRNA_M-pyrifera_M_contig86588.20147.1 vs. uniprot
Match: A0A453P110_AEGTS (Gp_dh_C domain-containing protein n=2 Tax=Aegilops tauschii subsp. strangulata TaxID=200361 RepID=A0A453P110_AEGTS) HSP 1 Score: 187 bits (475), Expect = 8.630e-58 Identity = 100/145 (68.97%), Postives = 119/145 (82.07%), Query Frame = 1 Query: 1 TVDAASAKDLRAGRAASGNIIPASTGAAKAVGKVIPEVAGKLTGMAFRVPTLDVSVVDLTVRLAKGASSDDIVAAIKQVSEGSMKGVMTWTDEPAVSSDFTGSTYSCIFDVTAGIALNDNFHKLIAFYDNEFGYSCRLVDLALHI 435 TVD S+KD R GRAAS NIIP+STGAAKAVGKV+PE+ GKLTGMAFRVPT+DVSVVDLTVRLAK A+ D I AAIK+ SEG++KG++ + DE VS+DF G S IFD AGIALNDNF KL+++YDNE+GYS R+VDL H+ Sbjct: 52 TVDGPSSKDWRGGRAASFNIIPSSTGAAKAVGKVLPELNGKLTGMAFRVPTVDVSVVDLTVRLAKPATYDQIKAAIKEESEGNLKGILGYVDEDLVSTDFQGDNRSSIFDAKAGIALNDNFVKLVSWYDNEWGYSTRVVDLIRHM 196
BLAST of mRNA_M-pyrifera_M_contig86588.20147.1 vs. uniprot
Match: A0A6M2A1S2_9BACT (Glyceraldehyde-3-phosphate dehydrogenase n=1 Tax=Chlamydiae bacterium TaxID=2081524 RepID=A0A6M2A1S2_9BACT) HSP 1 Score: 191 bits (485), Expect = 1.470e-57 Identity = 100/147 (68.03%), Postives = 115/147 (78.23%), Query Frame = 1 Query: 1 TVDAASAKDLRAGRAASGNIIPASTGAAKAVGKVIPEVAGKLTGMAFRVPTLDVSVVDLTVRLAKGASSDDIVAAIKQVSEGSMKGVMTWTDEPAVSSDFTGSTYSCIFDVTAGIALNDNFHKLIAFYDNEFGYSCRLVDLALHISK 441 TVD S KD R GRAA NIIP+STGAAKAV VIPEV GKLTGMAFR+PT+DVS VDLTVR+AK S +I AA K SEGSMKG++ +TDEP VSSDF GS YSCIFD AGIALN F+KL+A+YDNEFGY+ R+VDL ++ Sbjct: 188 TVDGPSKKDFRGGRAAGMNIIPSSTGAAKAVALVIPEVKGKLTGMAFRIPTIDVSAVDLTVRVAKDTSYQEICAAYKNASEGSMKGILQYTDEPVVSSDFIGSHYSCIFDQEAGIALNSRFYKLVAWYDNEFGYATRVVDLLKYMES 334
BLAST of mRNA_M-pyrifera_M_contig86588.20147.1 vs. uniprot
Match: UPI00053C0ABD (glyceraldehyde-3-phosphate dehydrogenase 1, cytosolic n=1 Tax=Tarenaya hassleriana TaxID=28532 RepID=UPI00053C0ABD) HSP 1 Score: 191 bits (484), Expect = 2.080e-57 Identity = 100/147 (68.03%), Postives = 121/147 (82.31%), Query Frame = 1 Query: 1 TVDAASAKDLRAGRAASGNIIPASTGAAKAVGKVIPEVAGKLTGMAFRVPTLDVSVVDLTVRLAKGASSDDIVAAIKQVSEGSMKGVMTWTDEPAVSSDFTGSTYSCIFDVTAGIALNDNFHKLIAFYDNEFGYSCRLVDLALHISK 441 TVD S KD R GRAAS NIIP+STGAAKAVGKV+PE+ GKLTGMAFRVPT+DVSVVDLTVRL+K AS D I +A+K+ SEGSMKG++ +T++ VSSDF G + S IFD AGIALNDNF K++++YDNE+GYS R+VDL HI+ Sbjct: 189 TVDGPSMKDWRGGRAASFNIIPSSTGAAKAVGKVLPELNGKLTGMAFRVPTVDVSVVDLTVRLSKNASYDSIKSALKEASEGSMKGILGYTEDDVVSSDFVGDSRSSIFDAKAGIALNDNFVKIVSWYDNEWGYSNRVVDLVRHIAS 335
BLAST of mRNA_M-pyrifera_M_contig86588.20147.1 vs. uniprot
Match: A9PA00_POPTR (Glyceraldehyde-3-phosphate dehydrogenase n=15 Tax=Saliceae TaxID=238069 RepID=A9PA00_POPTR) HSP 1 Score: 191 bits (484), Expect = 2.140e-57 Identity = 102/147 (69.39%), Postives = 120/147 (81.63%), Query Frame = 1 Query: 1 TVDAASAKDLRAGRAASGNIIPASTGAAKAVGKVIPEVAGKLTGMAFRVPTLDVSVVDLTVRLAKGASSDDIVAAIKQVSEGSMKGVMTWTDEPAVSSDFTGSTYSCIFDVTAGIALNDNFHKLIAFYDNEFGYSCRLVDLALHISK 441 TVD S+KD R GRAAS NIIP+STGAAKAVGKV+P + GKLTGMAFRVPT+DVSVVDLTVRL KGAS +DI AAIK+ SEG MKG++ +TDE VS+DF G S IFD AGIALNDN+ KL+A+YDNE+GYS R+VDL +I+ Sbjct: 189 TVDGPSSKDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMAFRVPTVDVSVVDLTVRLEKGASYEDIKAAIKEESEGKMKGILGYTDEDLVSTDFIGDNRSSIFDAKAGIALNDNYVKLVAWYDNEWGYSTRVVDLITYIAS 335
BLAST of mRNA_M-pyrifera_M_contig86588.20147.1 vs. uniprot
Match: A0A0L0T0E9_ALLM3 (Glyceraldehyde-3-phosphate dehydrogenase n=2 Tax=Allomyces macrogynus (strain ATCC 38327) TaxID=578462 RepID=A0A0L0T0E9_ALLM3) HSP 1 Score: 191 bits (484), Expect = 2.380e-57 Identity = 100/147 (68.03%), Postives = 119/147 (80.95%), Query Frame = 1 Query: 1 TVDAASAKDLRAGRAASGNIIPASTGAAKAVGKVIPEVAGKLTGMAFRVPTLDVSVVDLTVRLAKGASSDDIVAAIKQVSEGSMKGVMTWTDEPAVSSDFTGSTYSCIFDVTAGIALNDNFHKLIAFYDNEFGYSCRLVDLALHISK 441 TVD S KD R+GR A+ NIIPASTGAAKAVGKVIP + GKLTGMAFRVPT DVSVVDLTVRLAK A+ D I A IKQ S+ S+KG++ +T++ VS+DF G ++S IFD AGIALND F KLI++YDNEFGYSCR++DL HI+K Sbjct: 187 TVDGPSGKDWRSGRGAAQNIIPASTGAAKAVGKVIPALNGKLTGMAFRVPTPDVSVVDLTVRLAKPATYDQIKAVIKQASQSSLKGILGYTEDAVVSNDFVGDSHSSIFDADAGIALNDTFVKLISWYDNEFGYSCRVIDLVKHIAK 333
BLAST of mRNA_M-pyrifera_M_contig86588.20147.1 vs. uniprot
Match: C8KI26_BRAPC (Glyceraldehyde-3-phosphate dehydrogenase n=3 Tax=Brachionus TaxID=10194 RepID=C8KI26_BRAPC) HSP 1 Score: 190 bits (483), Expect = 2.710e-57 Identity = 99/147 (67.35%), Postives = 117/147 (79.59%), Query Frame = 1 Query: 1 TVDAASAKDLRAGRAASGNIIPASTGAAKAVGKVIPEVAGKLTGMAFRVPTLDVSVVDLTVRLAKGASSDDIVAAIKQVSEGSMKGVMTWTDEPAVSSDFTGSTYSCIFDVTAGIALNDNFHKLIAFYDNEFGYSCRLVDLALHISK 441 TVD S KD R GR A+ NIIP+STGAAKAVGKVIPE+ GKLTGMAFRVPT DVSVVDLTVRLAK A D++ AAIK SE +KG++ +T++ VSSDF G +S IFD AGI+LNDNF KL+++YDNEFGYSCR+VDL H+ K Sbjct: 184 TVDGPSNKDWRGGRTAATNIIPSSTGAAKAVGKVIPELNGKLTGMAFRVPTADVSVVDLTVRLAKPAKYDEVKAAIKHASENELKGILAYTEDEVVSSDFIGDHHSSIFDAKAGISLNDNFVKLVSWYDNEFGYSCRVVDLIQHVYK 330 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig86588.20147.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig86588.20147.1 >prot_M-pyrifera_M_contig86588.20147.1 ID=prot_M-pyrifera_M_contig86588.20147.1|Name=mRNA_M-pyrifera_M_contig86588.20147.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=148bp TVDAASAKDLRAGRAASGNIIPASTGAAKAVGKVIPEVAGKLTGMAFRVPback to top mRNA from alignment at M-pyrifera_M_contig86588:2..445+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig86588.20147.1 ID=mRNA_M-pyrifera_M_contig86588.20147.1|Name=mRNA_M-pyrifera_M_contig86588.20147.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=444bp|location=Sequence derived from alignment at M-pyrifera_M_contig86588:2..445+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig86588:2..445+ >mRNA_M-pyrifera_M_contig86588.20147.1 ID=mRNA_M-pyrifera_M_contig86588.20147.1|Name=mRNA_M-pyrifera_M_contig86588.20147.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=888bp|location=Sequence derived from alignment at M-pyrifera_M_contig86588:2..445+ (Macrocystis pyrifera P11B4 male)back to top |