mRNA_M-pyrifera_M_contig86252.20097.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig86252.20097.1 vs. uniprot
Match: A0A7S1CDL5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CDL5_9STRA) HSP 1 Score: 106 bits (265), Expect = 2.070e-25 Identity = 53/106 (50.00%), Postives = 75/106 (70.75%), Query Frame = 1 Query: 13 IMVVVRRLMQQMDAQGISSSEFSSLKEALEEDAEGALEVLKQLAMTRQFDAKQAARAVRAIGALSPFEKVEAAVSIYPALMHPESFALVLEEFEDDAERENVCHRL 330 +M VR LM+ M A+G+ ++F L L E+A GA+E ++Q+AMT +FD KQA R V +G +SPF+K EAAV +YP L + +SF LVL+ F+D A+R N+CHRL Sbjct: 185 VMATVRELMRNMKARGVPDAQFQQLVSVLREEAVGAIESVRQVAMTHEFDVKQACRLVTLVGNVSPFDKAEAAVCMYPTLFNKDSFTLVLDLFDDAADRANICHRL 290
BLAST of mRNA_M-pyrifera_M_contig86252.20097.1 vs. uniprot
Match: A0A5A8C386_CAFRO (Uncharacterized protein n=3 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8C386_CAFRO) HSP 1 Score: 102 bits (253), Expect = 2.580e-23 Identity = 53/109 (48.62%), Postives = 77/109 (70.64%), Query Frame = 1 Query: 4 QREIMVVVRRLMQQMDAQGISSSEFSSLKEALEEDAEGALEVLKQLAMTRQFDAKQAARAVRAIGALSPFEKVEAAVSIYPALMHPESFALVLEEFEDDAERENVCHRL 330 ++ ++ VR LM M +G+ +E + A++ D + A+ L+QLA+TR+FDAKQA V IG +SPF++VEAAV +YPALM+ ESF +VL FEDD +++NVCHRL Sbjct: 286 EQRLLAAVRMLMSDMSRRGVDDAELLQVTSAIDHDPDRAIAGLRQLAITRRFDAKQAFGIVSQIGRVSPFDQVEAAVLLYPALMNTESFHVVLAAFEDDDDKDNVCHRL 394
BLAST of mRNA_M-pyrifera_M_contig86252.20097.1 vs. uniprot
Match: A0A7S0K8Z3_CAFRO (Hypothetical protein n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A7S0K8Z3_CAFRO) HSP 1 Score: 102 bits (253), Expect = 4.000e-23 Identity = 53/109 (48.62%), Postives = 77/109 (70.64%), Query Frame = 1 Query: 4 QREIMVVVRRLMQQMDAQGISSSEFSSLKEALEEDAEGALEVLKQLAMTRQFDAKQAARAVRAIGALSPFEKVEAAVSIYPALMHPESFALVLEEFEDDAERENVCHRL 330 ++ ++ VR LM M +G+ +E + A++ D + A+ L+QLA+TR+FDAKQA V IG +SPF++VEAAV +YPALM+ ESF +VL FEDD +++NVCHRL Sbjct: 349 EQRLLAAVRMLMSDMSRRGVDDAELLQVTSAIDHDPDRAIAGLRQLAITRRFDAKQAFGIVSQIGRVSPFDQVEAAVLLYPALMNTESFHVVLAAFEDDDDKDNVCHRL 457
BLAST of mRNA_M-pyrifera_M_contig86252.20097.1 vs. uniprot
Match: A0A482RI71_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RI71_9ARCH) HSP 1 Score: 89.0 bits (219), Expect = 2.530e-20 Identity = 51/111 (45.95%), Postives = 76/111 (68.47%), Query Frame = 1 Query: 13 IMVVVRRLMQQMDAQGISSSEFSSLKEALE---EDAEG--ALEVLKQLAMTRQFDAKQAARAVRAIGALSPFEKVEAAVSIYPALMHPESFALVLEEFEDDAERENVCHRL 330 +M V+ LM +MDA G+ +EF +L E L ED G AL+V++Q+++TR FD +QA V IG++SPF+++EAAV +Y +M+ ES+ LVL F+D +R N+CHRL Sbjct: 14 VMNSVQALMSKMDAHGVPDAEFRALLETLTRLTEDDMGDYALQVMRQMSLTRTFDVRQAREMVITIGSVSPFDQIEAAVLLYDKVMNKESYPLVLACFDDATDRANICHRL 124
BLAST of mRNA_M-pyrifera_M_contig86252.20097.1 vs. uniprot
Match: A0A7S2BL28_9STRA (Hypothetical protein n=2 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BL28_9STRA) HSP 1 Score: 60.8 bits (146), Expect = 1.260e-8 Identity = 34/107 (31.78%), Postives = 61/107 (57.01%), Query Frame = 1 Query: 25 VRRLMQQMDAQGISSSEFSSLKEALEE-----DAEGALEVLKQLAMTRQFDAKQAARAVRAIGALSPFEKVEAAVSIYPALMHPESFALVLEEFEDDAERENVCHRL 330 V+ LM MD +G+S +F LK L+ D G ++Q A +R + + Q ++ + ++PFE +E A +Y +++ +SF ++L F+D A+R+N+ HRL Sbjct: 110 VKSLMVDMDREGVSKDDFKLLKGILQNWDMDADEAGWFGTVRQFASSRAYTSHQGVELLQIMKQVNPFELIELACFLYDNILNRDSFQMLLNVFDDPADRDNIIHRL 216
BLAST of mRNA_M-pyrifera_M_contig86252.20097.1 vs. uniprot
Match: A0A7S1XQ49_9STRA (Hypothetical protein n=4 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XQ49_9STRA) HSP 1 Score: 55.5 bits (132), Expect = 1.220e-6 Identity = 32/72 (44.44%), Postives = 45/72 (62.50%), Query Frame = 1 Query: 121 LEVLKQLAMTRQFDAKQAARAVRAIGA--LSPFEKVEAAVSIYPALMHPESFALVLEEFEDDAERENVCHRL 330 LE ++Q A R F AKQA + +GA + FE++E AV Y L++ SF LVL +F D ++REN+ HRL Sbjct: 186 LETIQQFASNRHFLAKQAVELLTILGADGEAAFERMELAVFFYEKLLNKGSFQLVLNQFSDPSDRENILHRL 257 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig86252.20097.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 6
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig86252.20097.1 >prot_M-pyrifera_M_contig86252.20097.1 ID=prot_M-pyrifera_M_contig86252.20097.1|Name=mRNA_M-pyrifera_M_contig86252.20097.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=105bp MVVVRRLMQQMDAQGISSSEFSSLKEALEEDAEGALEVLKQLAMTRQFDAback to top mRNA from alignment at M-pyrifera_M_contig86252:452..781- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig86252.20097.1 ID=mRNA_M-pyrifera_M_contig86252.20097.1|Name=mRNA_M-pyrifera_M_contig86252.20097.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=330bp|location=Sequence derived from alignment at M-pyrifera_M_contig86252:452..781- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig86252:452..781- >mRNA_M-pyrifera_M_contig86252.20097.1 ID=mRNA_M-pyrifera_M_contig86252.20097.1|Name=mRNA_M-pyrifera_M_contig86252.20097.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=630bp|location=Sequence derived from alignment at M-pyrifera_M_contig86252:452..781- (Macrocystis pyrifera P11B4 male)back to top |