mRNA_M-pyrifera_M_contig86164.20079.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig86164.20079.1 vs. uniprot
Match: A0A8J7TWT5_9BACT (BlaI/MecI/CopY family transcriptional regulator n=1 Tax=Zavarzinella sp. TaxID=1914240 RepID=A0A8J7TWT5_9BACT) HSP 1 Score: 75.5 bits (184), Expect = 1.820e-15 Identity = 41/86 (47.67%), Postives = 52/86 (60.47%), Query Frame = 1 Query: 1 AYTAAQTLLGRLVDKGFVERIKDGRAFTFRPLVDRDALLGAELDDLAARLSEGQPMPLLLNLVHSRRVSPDDLQHLRKLIDELDEE 258 AYT AQTLL RL+ KG+V + G A +RP V R+ LL L DLA EG PL+L LV SPDD+ R+L+D+L+ E Sbjct: 41 AYTTAQTLLTRLMAKGYVAADRTGPAHVYRPAVSRNELLQQRLTDLADEFCEGTTSPLVLALVEGSEFSPDDIARFRQLLDKLEAE 126
BLAST of mRNA_M-pyrifera_M_contig86164.20079.1 vs. uniprot
Match: A0A354GL25_9BACT (Transcriptional regulator n=1 Tax=Planctomycetales bacterium TaxID=2053591 RepID=A0A354GL25_9BACT) HSP 1 Score: 75.1 bits (183), Expect = 2.450e-15 Identity = 40/84 (47.62%), Postives = 54/84 (64.29%), Query Frame = 1 Query: 1 AYTAAQTLLGRLVDKGFVERIKDGRAFTFRPLVDRDALLGAELDDLAARLSEGQPMPLLLNLVHSRRVSPDDLQHLRKLIDELD 252 AYT QTLL RL KG+V + G A ++ V RDAL+ L DLA +L G P+LL LV R++ +D+QHLR+L+D+LD Sbjct: 42 AYTTVQTLLQRLEAKGYVASDRAGAAHVYQATVSRDALVSRRLRDLADQLCGGTASPMLLALVEDGRLTNEDVQHLRRLLDQLD 125
BLAST of mRNA_M-pyrifera_M_contig86164.20079.1 vs. uniprot
Match: UPI001E582F17 (BlaI/MecI/CopY family transcriptional regulator n=1 Tax=Stenotrophomonas sp. SY1 TaxID=477235 RepID=UPI001E582F17) HSP 1 Score: 72.8 bits (177), Expect = 1.470e-14 Identity = 38/87 (43.68%), Postives = 56/87 (64.37%), Query Frame = 1 Query: 1 AYTAAQTLLGRLVDKGFVERIKDGRAFTFRPLVDRDALLGAELDDLAARLSEGQPMPLLLNLVHSRRVSPDDLQHLRKLIDELDEEE 261 A +TLL RL++KG +E K GR + + PLV+RDA + E L RL +G+ PL+ + RR+S DD+ LRKL++ELD+E+ Sbjct: 36 AEATVKTLLNRLLNKGAIEAQKQGRRYLYTPLVERDAWVLEESSSLLDRLFDGRVAPLVAHFSQHRRLSRDDVAQLRKLLEELDDEQ 122
BLAST of mRNA_M-pyrifera_M_contig86164.20079.1 vs. uniprot
Match: A0A142WTP7_9PLAN (Penicillinase repressor n=1 Tax=Planctomyces sp. SH-PL14 TaxID=1632864 RepID=A0A142WTP7_9PLAN) HSP 1 Score: 72.8 bits (177), Expect = 2.110e-14 Identity = 37/83 (44.58%), Postives = 50/83 (60.24%), Query Frame = 1 Query: 4 YTAAQTLLGRLVDKGFVERIKDGRAFTFRPLVDRDALLGAELDDLAARLSEGQPMPLLLNLVHSRRVSPDDLQHLRKLIDELD 252 Y Q LL RL KG V R +DGR FR +DR +G L DLA + EG PLL L+H+R +S +D+ LRKL+++L+ Sbjct: 43 YYTVQKLLERLEGKGLVTRDRDGRTHRFRAAIDRSQFVGDRLQDLADTVCEGSMAPLLTGLLHTRSISAEDVDVLRKLVEDLE 125
BLAST of mRNA_M-pyrifera_M_contig86164.20079.1 vs. uniprot
Match: A0A0R0ATG3_9GAMM (BlaI/MecI/CopY family transcriptional regulator n=1 Tax=Stenotrophomonas pictorum JCM 9942 TaxID=1236960 RepID=A0A0R0ATG3_9GAMM) HSP 1 Score: 70.9 bits (172), Expect = 8.560e-14 Identity = 37/87 (42.53%), Postives = 54/87 (62.07%), Query Frame = 1 Query: 1 AYTAAQTLLGRLVDKGFVERIKDGRAFTFRPLVDRDALLGAELDDLAARLSEGQPMPLLLNLVHSRRVSPDDLQHLRKLIDELDEEE 261 A +TLL RL++KG + KDGR + + PLV RD + E L RL EG+ PL+ + RR+S DD+ LRKL+++LD+E+ Sbjct: 37 AEATVKTLLNRLLNKGAIAAQKDGRRYLYSPLVQRDTWVLEESSSLIERLFEGRVAPLVAHFSQHRRLSRDDVAELRKLLEDLDDEQ 123
BLAST of mRNA_M-pyrifera_M_contig86164.20079.1 vs. uniprot
Match: A0A0Q4QNH6_9GAMM (BlaI/MecI/CopY family transcriptional regulator n=6 Tax=Xanthomonadaceae TaxID=32033 RepID=A0A0Q4QNH6_9GAMM) HSP 1 Score: 69.3 bits (168), Expect = 3.430e-13 Identity = 35/87 (40.23%), Postives = 55/87 (63.22%), Query Frame = 1 Query: 1 AYTAAQTLLGRLVDKGFVERIKDGRAFTFRPLVDRDALLGAELDDLAARLSEGQPMPLLLNLVHSRRVSPDDLQHLRKLIDELDEEE 261 A +TLL RL++KG + K+GR + + PLV RDA L E L RL +G+ PL+ + R++S DD+ LR+L++ELD+++ Sbjct: 37 AEATIKTLLNRLLNKGAISAAKEGRRYLYAPLVQRDAWLLEESSSLLERLFDGRVAPLVAHFSQHRKLSRDDVAELRRLLEELDDDQ 123
BLAST of mRNA_M-pyrifera_M_contig86164.20079.1 vs. uniprot
Match: A0A2D6PXM4_9BACT (Transcriptional regulator n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A2D6PXM4_9BACT) HSP 1 Score: 68.6 bits (166), Expect = 8.270e-13 Identity = 38/84 (45.24%), Postives = 51/84 (60.71%), Query Frame = 1 Query: 4 YTAAQTLLGRLVDKGFVERIK-DGRAFTFRPLVDRDALLGAELDDLAARLSEGQPMPLLLNLVHSRRVSPDDLQHLRKLIDELD 252 Y Q LL RL +KG V R + DG F +DRD L+G L +A +L +G PLL +LV + R+S +D Q LR+L+DELD Sbjct: 43 YGTVQKLLERLREKGHVSRERRDGAPHLFAATLDRDGLIGRSLQTMAEKLCDGSMTPLLTSLVRTERLSAEDRQALRRLVDELD 126
BLAST of mRNA_M-pyrifera_M_contig86164.20079.1 vs. uniprot
Match: A0A7Y4WGB9_9BACT (BlaI/MecI/CopY family transcriptional regulator n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A7Y4WGB9_9BACT) HSP 1 Score: 68.6 bits (166), Expect = 9.480e-13 Identity = 38/84 (45.24%), Postives = 53/84 (63.10%), Query Frame = 1 Query: 1 AYTAAQTLLGRLVDKGFVERIKDGRAFTFRPLVDRDALLGAELDDLAARLSEGQPMPLLLNLVHSRRVSPDDLQHLRKLIDELD 252 AYT QTLL RL+ KGFV R K G A + ++DR+ L+ + DLA RL G PLLL+LV ++R + +L R+L++E D Sbjct: 46 AYTTVQTLLHRLLAKGFVARKKAGVAQIYSAVLDRNELVARHMTDLAERLCAGSMSPLLLSLVKTKRFTRGELARFRELLEEGD 129
BLAST of mRNA_M-pyrifera_M_contig86164.20079.1 vs. uniprot
Match: A0A6G7YWH9_9GAMM (BlaI/MecI/CopY family transcriptional regulator n=1 Tax=Lysobacter sp. HDW10 TaxID=2714936 RepID=A0A6G7YWH9_9GAMM) HSP 1 Score: 67.0 bits (162), Expect = 2.500e-12 Identity = 31/79 (39.24%), Postives = 53/79 (67.09%), Query Frame = 1 Query: 16 QTLLGRLVDKGFVERIKDGRAFTFRPLVDRDALLGAELDDLAARLSEGQPMPLLLNLVHSRRVSPDDLQHLRKLIDELD 252 +TLL RL++KG +E +KDGR + + P++ R+A + E + + RL +G+ PL+ + +++S D+ LRKLIDE+D Sbjct: 41 KTLLNRLLNKGAIEAVKDGRRYLYSPVLKREAWVARESESVLTRLFDGRVAPLVAHFSKHQKLSEVDIAELRKLIDEID 119
BLAST of mRNA_M-pyrifera_M_contig86164.20079.1 vs. uniprot
Match: A0A2S8GW24_9BURK (BlaI/MecI/CopY family transcriptional regulator n=2 Tax=Massilia phosphatilytica TaxID=2026176 RepID=A0A2S8GW24_9BURK) HSP 1 Score: 66.6 bits (161), Expect = 3.790e-12 Identity = 37/82 (45.12%), Postives = 51/82 (62.20%), Query Frame = 1 Query: 16 QTLLGRLVDKGFVERIKDGRAFTFRPLVDRDALLGAELDDLAARLSEGQPMPLLLNLVHSRRVSPDDLQHLRKLIDELDEEE 261 +TLL RL+ KG + K+GR F + ++ R+ L AE D L RL G+ PL+ R++SP D+Q LRKLIDELD+ E Sbjct: 42 KTLLNRLLKKGAIAAQKEGRRFLYHAVLRREDWLAAESDGLLDRLFGGRIAPLVAYFGSQRKLSPKDIQELRKLIDELDDGE 123 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig86164.20079.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig86164.20079.1 >prot_M-pyrifera_M_contig86164.20079.1 ID=prot_M-pyrifera_M_contig86164.20079.1|Name=mRNA_M-pyrifera_M_contig86164.20079.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=90bp AYTAAQTLLGRLVDKGFVERIKDGRAFTFRPLVDRDALLGAELDDLAARLback to top mRNA from alignment at M-pyrifera_M_contig86164:582..851- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig86164.20079.1 ID=mRNA_M-pyrifera_M_contig86164.20079.1|Name=mRNA_M-pyrifera_M_contig86164.20079.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=270bp|location=Sequence derived from alignment at M-pyrifera_M_contig86164:582..851- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig86164:582..851- >mRNA_M-pyrifera_M_contig86164.20079.1 ID=mRNA_M-pyrifera_M_contig86164.20079.1|Name=mRNA_M-pyrifera_M_contig86164.20079.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=540bp|location=Sequence derived from alignment at M-pyrifera_M_contig86164:582..851- (Macrocystis pyrifera P11B4 male)back to top |